RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 DCAF11Q8TEB1 546 aa7.91□□□□□ -1.14
LINC00397-201ENST00000422074 CITED4Q96RK1 184 aa7.91□□□□□ -1.14
LINC00397-201ENST00000422074 POP1Q99575 1024 aaKnown RBP7.91□□□□□ -1.14
LINC00397-201ENST00000422074 K7ELQ4 463 aaPredicted RBP7.9□□□□□ -1.14
LINC00397-201ENST00000422074 CDC27P30260 824 aa7.9□□□□□ -1.14
LINC00397-201ENST00000422074 DOC2BQ14184 412 aa7.9□□□□□ -1.14
LINC00397-201ENST00000422074 TMEM130Q8N3G9 435 aa7.9□□□□□ -1.14
LINC00397-201ENST00000422074 SSBP4Q9BWG4 385 aaPredicted RBP7.9□□□□□ -1.14
LINC00397-201ENST00000422074 TPSG1Q9NRR2 321 aa7.9□□□□□ -1.14
LINC00397-201ENST00000422074 EREGO14944 169 aa7.89□□□□□ -1.15
LINC00397-201ENST00000422074 PHACTR2O75167 634 aa7.89□□□□□ -1.15
LINC00397-201ENST00000422074 FURINP09958 794 aa7.89□□□□□ -1.15
LINC00397-201ENST00000422074 RSPO4Q2I0M5 234 aaPredicted RBP7.89□□□□□ -1.15
LINC00397-201ENST00000422074 NKAPLQ5M9Q1 402 aa7.89□□□□□ -1.15
LINC00397-201ENST00000422074 TMEM102Q8N9M5 508 aaPredicted RBP7.89□□□□□ -1.15
LINC00397-201ENST00000422074 FAM129BQ96TA1 746 aa7.89□□□□□ -1.15
LINC00397-201ENST00000422074 ZFYVE28Q9HCC9 887 aa7.89□□□□□ -1.15
LINC00397-201ENST00000422074 FOXD3Q9UJU5 478 aaPredicted RBP7.89□□□□□ -1.15
LINC00397-201ENST00000422074 PTPRAP18433 802 aa7.88□□□□□ -1.15
LINC00397-201ENST00000422074 BRPF3Q9ULD4 1205 aa7.88□□□□□ -1.15
LINC00397-201ENST00000422074 SOWAHDA6NJG2 315 aa7.87□□□□□ -1.15
LINC00397-201ENST00000422074 PDE2AO00408 941 aaPredicted RBP7.87□□□□□ -1.15
LINC00397-201ENST00000422074 IGHA2P01877 340 aa7.87□□□□□ -1.15
LINC00397-201ENST00000422074 EDN3P14138 238 aa7.87□□□□□ -1.15
LINC00397-201ENST00000422074 ACPPP15309 386 aa7.87□□□□□ -1.15
LINC00397-201ENST00000422074 GALNT11Q8NCW6 608 aa7.87□□□□□ -1.15
LINC00397-201ENST00000422074 WFDC12Q8WWY7 111 aa7.87□□□□□ -1.15
LINC00397-201ENST00000422074 NXPE3Q969Y0 559 aa7.87□□□□□ -1.15
LINC00397-201ENST00000422074 LACRTQ9GZZ8 138 aa7.87□□□□□ -1.15
LINC00397-201ENST00000422074 MRPL18Q9H0U6 180 aaKnown RBP7.87□□□□□ -1.15
LINC00397-201ENST00000422074 USP21Q9UK80 565 aa7.87□□□□□ -1.15
LINC00397-201ENST00000422074 AMOTL2Q9Y2J4 779 aa7.87□□□□□ -1.15
LINC00397-201ENST00000422074 LINC01387J3KSC0 135 aa7.86□□□□□ -1.15
LINC00397-201ENST00000422074 NDUFB5O43674 189 aa7.86□□□□□ -1.15
LINC00397-201ENST00000422074 EPHA1P21709 976 aa7.86□□□□□ -1.15
LINC00397-201ENST00000422074 NOS3P29474 1203 aa7.86□□□□□ -1.15
LINC00397-201ENST00000422074 PDE3BQ13370 1112 aa7.86□□□□□ -1.15
LINC00397-201ENST00000422074 PEAR1Q5VY43 1037 aaPredicted RBP7.86□□□□□ -1.15
LINC00397-201ENST00000422074 Q6ZS46 218 aa7.86□□□□□ -1.15
LINC00397-201ENST00000422074 WNT8BQ93098 351 aa7.86□□□□□ -1.15
LINC00397-201ENST00000422074 ZKSCAN3Q9BRR0 538 aa7.86□□□□□ -1.15
LINC00397-201ENST00000422074 SOX13Q9UN79 622 aa7.86□□□□□ -1.15
LINC00397-201ENST00000422074 FSCN2O14926 492 aa7.85□□□□□ -1.15
LINC00397-201ENST00000422074 H2AFB1P0C5Y9 115 aa7.85□□□□□ -1.15
LINC00397-201ENST00000422074 H2AFB2P0C5Z0 115 aa7.85□□□□□ -1.15
LINC00397-201ENST00000422074 ITGB7P26010 798 aa7.85□□□□□ -1.15
LINC00397-201ENST00000422074 GALNT12Q8IXK2 581 aa7.85□□□□□ -1.15
LINC00397-201ENST00000422074 KLHL23Q8NBE8 558 aa7.85□□□□□ -1.15
LINC00397-201ENST00000422074 OSMRQ99650 979 aa7.85□□□□□ -1.15
LINC00397-201ENST00000422074 BHLHE41Q9C0J9 482 aaPredicted RBP7.85□□□□□ -1.15
LINC00397-201ENST00000422074 SH2B1Q9NRF2 756 aaPredicted RBP7.85□□□□□ -1.15
LINC00397-201ENST00000422074 F8W735 103 aaPredicted RBP7.84□□□□□ -1.15
LINC00397-201ENST00000422074 H3BRJ5 948 aa7.84□□□□□ -1.15
LINC00397-201ENST00000422074 NEFLP07196 543 aa7.84□□□□□ -1.15
LINC00397-201ENST00000422074 DZIP1LQ8IYY4 767 aaKnown RBP7.84□□□□□ -1.15
LINC00397-201ENST00000422074 HHIPQ96QV1 700 aa7.84□□□□□ -1.15
LINC00397-201ENST00000422074 RBCK1Q9BYM8 510 aa7.84□□□□□ -1.15
LINC00397-201ENST00000422074 LOC100996750A0A140TA64 210 aa7.83□□□□□ -1.16
LINC00397-201ENST00000422074 DYRK3O43781 588 aa7.83□□□□□ -1.16
LINC00397-201ENST00000422074 TRPA1O75762 1119 aa7.83□□□□□ -1.16
LINC00397-201ENST00000422074 CD68P34810 354 aaPredicted RBP7.83□□□□□ -1.16
LINC00397-201ENST00000422074 IREB2P48200 963 aaKnown RBP7.83□□□□□ -1.16
LINC00397-201ENST00000422074 PIP4K2BP78356 416 aa7.83□□□□□ -1.16
LINC00397-201ENST00000422074 FAM117BQ6P1L5 589 aa7.83□□□□□ -1.16
LINC00397-201ENST00000422074 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.83□□□□□ -1.16
LINC00397-201ENST00000422074 KRTAP4-6Q9BYQ5 205 aa7.83□□□□□ -1.16
LINC00397-201ENST00000422074 AKTIPQ9H8T0 292 aa7.83□□□□□ -1.16
LINC00397-201ENST00000422074 OSGEPQ9NPF4 335 aa7.83□□□□□ -1.16
LINC00397-201ENST00000422074 FOXD4L6Q3SYB3 417 aaPredicted RBP7.82□□□□□ -1.16
LINC00397-201ENST00000422074 FOXD4L3Q6VB84 417 aaPredicted RBP7.82□□□□□ -1.16
LINC00397-201ENST00000422074 BSNDQ8WZ55 320 aa7.82□□□□□ -1.16
LINC00397-201ENST00000422074 ALKBH8Q96BT7 664 aaKnown RBP7.82□□□□□ -1.16
LINC00397-201ENST00000422074 SEC31BQ9NQW1 1179 aa7.82□□□□□ -1.16
LINC00397-201ENST00000422074 LATS2Q9NRM7 1088 aa7.82□□□□□ -1.16
LINC00397-201ENST00000422074 CABP4P57796 275 aa7.81□□□□□ -1.16
LINC00397-201ENST00000422074 TXNDC11Q6PKC3 985 aa7.81□□□□□ -1.16
LINC00397-201ENST00000422074 VN1R5Q7Z5H4 357 aa7.81□□□□□ -1.16
LINC00397-201ENST00000422074 MEGF10Q96KG7 1140 aa7.81□□□□□ -1.16
LINC00397-201ENST00000422074 TRAIPQ9BWF2 469 aa7.81□□□□□ -1.16
LINC00397-201ENST00000422074 SEMA6BQ9H3T3 888 aa7.81□□□□□ -1.16
LINC00397-201ENST00000422074 KCNK4Q9NYG8 393 aa7.81□□□□□ -1.16
LINC00397-201ENST00000422074 A0A1W2PP55 124 aa7.8□□□□□ -1.16
LINC00397-201ENST00000422074 FAM177BA6PVY3 158 aa7.8□□□□□ -1.16
LINC00397-201ENST00000422074 GPR182O15218 404 aa7.8□□□□□ -1.16
LINC00397-201ENST00000422074 KIAA0319Q5VV43 1072 aa7.8□□□□□ -1.16
LINC00397-201ENST00000422074 KLHDC7BQ96G42 594 aa7.8□□□□□ -1.16
LINC00397-201ENST00000422074 DMRTB1Q96MA1 342 aa7.8□□□□□ -1.16
LINC00397-201ENST00000422074 DNAJC25Q9H1X3 360 aa7.8□□□□□ -1.16
LINC00397-201ENST00000422074 ADAM11O75078 769 aa7.79□□□□□ -1.16
LINC00397-201ENST00000422074 CPNE3O75131 537 aaKnown RBP7.79□□□□□ -1.16
LINC00397-201ENST00000422074 KCNA1Q09470 495 aa7.79□□□□□ -1.16
LINC00397-201ENST00000422074 USPL1Q5W0Q7 1092 aa7.79□□□□□ -1.16
LINC00397-201ENST00000422074 CCNJLQ8IV13 435 aa7.79□□□□□ -1.16
LINC00397-201ENST00000422074 FOXD4L4Q8WXT5 416 aaPredicted RBP7.79□□□□□ -1.16
LINC00397-201ENST00000422074 TP53INP1Q96A56 240 aa7.79□□□□□ -1.16
LINC00397-201ENST00000422074 TCF12Q99081 682 aa7.79□□□□□ -1.16
LINC00397-201ENST00000422074 CARD10Q9BWT7 1032 aa7.79□□□□□ -1.16
LINC00397-201ENST00000422074 SOX17Q9H6I2 414 aaPredicted RBP7.79□□□□□ -1.16
LINC00397-201ENST00000422074 ALX3O95076 343 aa7.78□□□□□ -1.16
LINC00397-201ENST00000422074 WISP1O95388 367 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms