RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 EN2P19622 333 aaPredicted RBP8.69□□□□□ -1.02
PMS1-208ENST00000421722 CCDC152Q4G0S7 254 aa8.69□□□□□ -1.02
PMS1-208ENST00000421722 ANKRD13DQ6ZTN6 518 aa8.69□□□□□ -1.02
PMS1-208ENST00000421722 OGFOD1Q8N543 542 aa8.69□□□□□ -1.02
PMS1-208ENST00000421722 OTUD5Q96G74 571 aa8.69□□□□□ -1.02
PMS1-208ENST00000421722 ZBED3Q96IU2 234 aaPredicted RBP8.69□□□□□ -1.02
PMS1-208ENST00000421722 ZNF333Q96JL9 665 aa8.69□□□□□ -1.02
PMS1-208ENST00000421722 COL4A1P02462 1669 aa8.69□□□□□ -1.02
PMS1-208ENST00000421722 ANXA1P04083 346 aa8.68□□□□□ -1.02
PMS1-208ENST00000421722 DACT2Q5SW24 774 aa8.68□□□□□ -1.02
PMS1-208ENST00000421722 STRIP1Q5VSL9 837 aa8.68□□□□□ -1.02
PMS1-208ENST00000421722 NBPF11Q86T75 865 aa8.68□□□□□ -1.02
PMS1-208ENST00000421722 FAM89AQ96GI7 184 aa8.68□□□□□ -1.02
PMS1-208ENST00000421722 WNT10BO00744 389 aa8.68□□□□□ -1.02
PMS1-208ENST00000421722 NBPF9Q3BBW0 867 aa8.68□□□□□ -1.02
PMS1-208ENST00000421722 ZBTB38Q8NAP3 1195 aaPredicted RBP8.68□□□□□ -1.02
PMS1-208ENST00000421722 CD99L2Q8TCZ2 262 aa8.68□□□□□ -1.02
PMS1-208ENST00000421722 HYPKQ9NX55 129 aa8.68□□□□□ -1.02
PMS1-208ENST00000421722 DLL1O00548 723 aa8.67□□□□□ -1.02
PMS1-208ENST00000421722 SP3Q02447 781 aa8.67□□□□□ -1.02
PMS1-208ENST00000421722 MKRN3Q13064 507 aaKnown RBP8.67□□□□□ -1.02
PMS1-208ENST00000421722 MTMR14Q8NCE2 650 aa8.67□□□□□ -1.02
PMS1-208ENST00000421722 COA1Q9GZY4 146 aa8.67□□□□□ -1.02
PMS1-208ENST00000421722 ANGEL1Q9UNK9 670 aaKnown RBP8.67□□□□□ -1.02
PMS1-208ENST00000421722 PDE8AO60658 829 aa8.66□□□□□ -1.02
PMS1-208ENST00000421722 PCCAP05165 728 aaPredicted RBP8.66□□□□□ -1.02
PMS1-208ENST00000421722 CAPN2P17655 700 aa8.66□□□□□ -1.02
PMS1-208ENST00000421722 PRMT2P55345 433 aa8.66□□□□□ -1.02
PMS1-208ENST00000421722 ANKRD18AQ8IVF6 992 aa8.66□□□□□ -1.02
PMS1-208ENST00000421722 DBF4Q9UBU7 674 aaPredicted RBP8.66□□□□□ -1.02
PMS1-208ENST00000421722 IGF2BP3O00425 579 aaKnown RBP eCLIP8.66□□□□□ -1.02
PMS1-208ENST00000421722 PPP1R12BO60237 982 aaPredicted RBP8.66□□□□□ -1.02
PMS1-208ENST00000421722 SUPT20HL1Q3ZLR7 823 aa8.66□□□□□ -1.02
PMS1-208ENST00000421722 PRAMEF18Q5VWM3 479 aa8.66□□□□□ -1.02
PMS1-208ENST00000421722 ZNF804BA4D1E1 1349 aa8.66□□□□□ -1.02
PMS1-208ENST00000421722 A0A1W2PPC1 479 aa8.65□□□□□ -1.02
PMS1-208ENST00000421722 H0YGN5 161 aa8.65□□□□□ -1.02
PMS1-208ENST00000421722 NPM3O75607 178 aaKnown RBP8.65□□□□□ -1.02
PMS1-208ENST00000421722 GNRH1P01148 92 aa8.65□□□□□ -1.02
PMS1-208ENST00000421722 CDC5LQ99459 802 aaKnown RBP8.65□□□□□ -1.02
PMS1-208ENST00000421722 SEC31BQ9NQW1 1179 aa8.65□□□□□ -1.02
PMS1-208ENST00000421722 CHPF2Q9P2E5 772 aa8.65□□□□□ -1.02
PMS1-208ENST00000421722 LEMD3Q9Y2U8 911 aa8.65□□□□□ -1.02
PMS1-208ENST00000421722 ATP5J2-PTCD1G3V325 749 aa8.65□□□□□ -1.03
PMS1-208ENST00000421722 CHL1O00533 1208 aa8.65□□□□□ -1.03
PMS1-208ENST00000421722 IREB2P48200 963 aaKnown RBP8.65□□□□□ -1.03
PMS1-208ENST00000421722 CRHR2Q13324 411 aa8.65□□□□□ -1.03
PMS1-208ENST00000421722 CNGB1Q14028 1251 aaPredicted RBP8.65□□□□□ -1.03
PMS1-208ENST00000421722 CCDC191Q8NCU4 936 aa8.65□□□□□ -1.03
PMS1-208ENST00000421722 ECM29Q5VYK3 1845 aa8.65□□□□□ -1.03
PMS1-208ENST00000421722 RIPK4P57078 832 aa8.64□□□□□ -1.03
PMS1-208ENST00000421722 SLC17A8Q8NDX2 589 aa8.64□□□□□ -1.03
PMS1-208ENST00000421722 ZCCHC17Q9NP64 241 aaKnown RBP8.64□□□□□ -1.03
PMS1-208ENST00000421722 MNX1P50219 401 aaPredicted RBP8.64□□□□□ -1.03
PMS1-208ENST00000421722 FKBP1AP62942 108 aaKnown RBP8.64□□□□□ -1.03
PMS1-208ENST00000421722 SLC4A8Q2Y0W8 1093 aa8.64□□□□□ -1.03
PMS1-208ENST00000421722 SLC9C1Q4G0N8 1177 aa8.64□□□□□ -1.03
PMS1-208ENST00000421722 HDGFL1Q5TGJ6 251 aa8.64□□□□□ -1.03
PMS1-208ENST00000421722 PCGF6Q9BYE7 350 aa8.64□□□□□ -1.03
PMS1-208ENST00000421722 ZFYVE28Q9HCC9 887 aa8.64□□□□□ -1.03
PMS1-208ENST00000421722 BSDC1Q9NW68 430 aaPredicted RBP8.64□□□□□ -1.03
PMS1-208ENST00000421722 SASH1O94885 1247 aa8.63□□□□□ -1.03
PMS1-208ENST00000421722 GOLGA2Q08379 1002 aa8.63□□□□□ -1.03
PMS1-208ENST00000421722 ANKRD13AQ8IZ07 590 aa8.63□□□□□ -1.03
PMS1-208ENST00000421722 NKX2-3Q8TAU0 364 aa8.63□□□□□ -1.03
PMS1-208ENST00000421722 DEFB129Q9H1M3 183 aa8.63□□□□□ -1.03
PMS1-208ENST00000421722 PRO3102Q9H379 93 aa8.63□□□□□ -1.03
PMS1-208ENST00000421722 SSC5DA1L4H1 1573 aa8.63□□□□□ -1.03
PMS1-208ENST00000421722 WDHD1O75717 1129 aaPredicted RBP8.63□□□□□ -1.03
PMS1-208ENST00000421722 CCT4P50991 539 aaKnown RBP8.63□□□□□ -1.03
PMS1-208ENST00000421722 PRKG1Q13976 671 aa8.63□□□□□ -1.03
PMS1-208ENST00000421722 DLGAP5Q15398 846 aa8.63□□□□□ -1.03
PMS1-208ENST00000421722 ANKRD2Q9GZV1 360 aa8.63□□□□□ -1.03
PMS1-208ENST00000421722 CWC25Q9NXE8 425 aaPredicted RBP8.63□□□□□ -1.03
PMS1-208ENST00000421722 PTCH2Q9Y6C5 1203 aa8.63□□□□□ -1.03
PMS1-208ENST00000421722 GJA5P36382 358 aa8.62□□□□□ -1.03
PMS1-208ENST00000421722 TMPOP42166 694 aaKnown RBP8.62□□□□□ -1.03
PMS1-208ENST00000421722 TTLL5Q6EMB2 1281 aa8.62□□□□□ -1.03
PMS1-208ENST00000421722 CHRDL2Q6WN34 429 aa8.62□□□□□ -1.03
PMS1-208ENST00000421722 RIC3Q7Z5B4 369 aa8.62□□□□□ -1.03
PMS1-208ENST00000421722 HTATIP2Q9BUP3 242 aa8.62□□□□□ -1.03
PMS1-208ENST00000421722 CHMP4AQ9BY43 222 aa8.62□□□□□ -1.03
PMS1-208ENST00000421722 MINPP1Q9UNW1 487 aa8.62□□□□□ -1.03
PMS1-208ENST00000421722 SCAF8Q9UPN6 1271 aaKnown RBP8.62□□□□□ -1.03
PMS1-208ENST00000421722 MYO1BO43795 1136 aa8.61□□□□□ -1.03
PMS1-208ENST00000421722 USP2O75604 605 aaPredicted RBP8.61□□□□□ -1.03
PMS1-208ENST00000421722 KIF22Q14807 665 aa8.61□□□□□ -1.03
PMS1-208ENST00000421722 C15orf52Q6ZUT6 534 aaKnown RBP8.61□□□□□ -1.03
PMS1-208ENST00000421722 CLMNQ96JQ2 1002 aa8.61□□□□□ -1.03
PMS1-208ENST00000421722 PTPN18Q99952 460 aa8.61□□□□□ -1.03
PMS1-208ENST00000421722 GTF2A2P52657 109 aa8.61□□□□□ -1.03
PMS1-208ENST00000421722 CTSWP56202 376 aa8.61□□□□□ -1.03
PMS1-208ENST00000421722 FBXW7Q969H0 707 aa8.61□□□□□ -1.03
PMS1-208ENST00000421722 MXD3Q9BW11 206 aa8.61□□□□□ -1.03
PMS1-208ENST00000421722 RBM27Q9P2N5 1060 aaKnown RBP8.61□□□□□ -1.03
PMS1-208ENST00000421722 NR2E3Q9Y5X4 410 aa8.61□□□□□ -1.03
PMS1-208ENST00000421722 RTL5Q5HYW3 569 aaPredicted RBP8.6□□□□□ -1.03
PMS1-208ENST00000421722 GPR153Q6NV75 609 aa8.6□□□□□ -1.03
PMS1-208ENST00000421722 MS4A4AQ96JQ5 239 aa8.6□□□□□ -1.03
PMS1-208ENST00000421722 METTL22Q9BUU2 404 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms