RNA–Protein interactions for RNA: ENST00000421386.1

SCG2-202, Transcript of secretogranin II, humanhuman

TSL 3

Gene SCG2, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-202ENST00000421386 SNX21Q969T3 373 aa6.27□□□□□ -1.41
SCG2-202ENST00000421386 ZDHHC3Q9NYG2 299 aa6.27□□□□□ -1.41
SCG2-202ENST00000421386 CABP1Q9NZU7 370 aa6.27□□□□□ -1.41
SCG2-202ENST00000421386 RSPH14Q9UHP6 348 aa6.27□□□□□ -1.41
SCG2-202ENST00000421386 CTNNA3Q9UI47 895 aa6.27□□□□□ -1.41
SCG2-202ENST00000421386 COG6Q9Y2V7 657 aa6.27□□□□□ -1.41
SCG2-202ENST00000421386 STARD13Q9Y3M8 1113 aa6.27□□□□□ -1.41
SCG2-202ENST00000421386 KANK1Q14678 1352 aa6.27□□□□□ -1.41
SCG2-202ENST00000421386 UNC13AQ9UPW8 1703 aa6.26□□□□□ -1.41
SCG2-202ENST00000421386 CCDC196A0A1B0GTZ2 297 aa6.26□□□□□ -1.41
SCG2-202ENST00000421386 KLHL33A6NCF5 533 aa6.26□□□□□ -1.41
SCG2-202ENST00000421386 CDK2AP1O14519 115 aa6.26□□□□□ -1.41
SCG2-202ENST00000421386 GATA4P43694 442 aa6.26□□□□□ -1.41
SCG2-202ENST00000421386 RAD51AP2Q09MP3 1159 aa6.26□□□□□ -1.41
SCG2-202ENST00000421386 SEMA3FQ13275 785 aa6.26□□□□□ -1.41
SCG2-202ENST00000421386 RAB3GAP1Q15042 981 aa6.26□□□□□ -1.41
SCG2-202ENST00000421386 SETDB1Q15047 1291 aa6.26□□□□□ -1.41
SCG2-202ENST00000421386 C11orf91Q3C1V1 193 aa6.26□□□□□ -1.41
SCG2-202ENST00000421386 MAP7D1Q3KQU3 841 aa6.26□□□□□ -1.41
SCG2-202ENST00000421386 TBCELQ5QJ74 424 aa6.26□□□□□ -1.41
SCG2-202ENST00000421386 ZMYM1Q5SVZ6 1142 aa6.26□□□□□ -1.41
SCG2-202ENST00000421386 SYT9Q86SS6 491 aa6.26□□□□□ -1.41
SCG2-202ENST00000421386 SUGP1Q8IWZ8 645 aaKnown RBP6.26□□□□□ -1.41
SCG2-202ENST00000421386 JMYQ8N9B5 988 aa6.26□□□□□ -1.41
SCG2-202ENST00000421386 C7orf43Q8WVR3 580 aa6.26□□□□□ -1.41
SCG2-202ENST00000421386 MKL1Q969V6 931 aa6.26□□□□□ -1.41
SCG2-202ENST00000421386 CRBNQ96SW2 442 aa6.26□□□□□ -1.41
SCG2-202ENST00000421386 SLC30A3Q99726 388 aa6.26□□□□□ -1.41
SCG2-202ENST00000421386 HIRIP3Q9BW71 556 aaPredicted RBP6.26□□□□□ -1.41
SCG2-202ENST00000421386 AVENQ9NQS1 362 aaPredicted RBP6.26□□□□□ -1.41
SCG2-202ENST00000421386 TPSG1Q9NRR2 321 aa6.26□□□□□ -1.41
SCG2-202ENST00000421386 POLA1P09884 1462 aaPredicted RBP6.26□□□□□ -1.41
SCG2-202ENST00000421386 PIK3R2O00459 728 aa6.25□□□□□ -1.41
SCG2-202ENST00000421386 NRDCO43847 1150 aa6.25□□□□□ -1.41
SCG2-202ENST00000421386 IGSF3O75054 1194 aa6.25□□□□□ -1.41
SCG2-202ENST00000421386 TPM3P06753 285 aa6.25□□□□□ -1.41
SCG2-202ENST00000421386 U2AF2P26368 475 aaKnown RBP eCLIP6.25□□□□□ -1.41
SCG2-202ENST00000421386 RABEP1Q15276 862 aa6.25□□□□□ -1.41
SCG2-202ENST00000421386 NOM1Q5C9Z4 860 aaKnown RBP6.25□□□□□ -1.41
SCG2-202ENST00000421386 SAMD5Q5TGI4 173 aa6.25□□□□□ -1.41
SCG2-202ENST00000421386 RAB44Q7Z6P3 723 aaPredicted RBP6.25□□□□□ -1.41
SCG2-202ENST00000421386 TXLNBQ8N3L3 684 aa6.25□□□□□ -1.41
SCG2-202ENST00000421386 POM121Q96HA1 1249 aa6.25□□□□□ -1.41
SCG2-202ENST00000421386 ALG2Q9H553 416 aa6.25□□□□□ -1.41
SCG2-202ENST00000421386 CWC15Q9P013 229 aaKnown RBP6.25□□□□□ -1.41
SCG2-202ENST00000421386 MARK1Q9P0L2 795 aa6.25□□□□□ -1.41
SCG2-202ENST00000421386 PRR12Q9ULL5 1215 aa6.25□□□□□ -1.41
SCG2-202ENST00000421386 RUSC2Q8N2Y8 1516 aa6.25□□□□□ -1.41
SCG2-202ENST00000421386 SPATA31E1Q6ZUB1 1445 aa6.25□□□□□ -1.41
SCG2-202ENST00000421386 ELOA3CA0A087WX78 387 aaPredicted RBP6.24□□□□□ -1.41
SCG2-202ENST00000421386 A0A1B0GUL7 405 aa6.24□□□□□ -1.41
SCG2-202ENST00000421386 CCDC189A1A4V9 331 aa6.24□□□□□ -1.41
SCG2-202ENST00000421386 ELOA3DA6NLF2 546 aaPredicted RBP6.24□□□□□ -1.41
SCG2-202ENST00000421386 SPATA31C1P0DKV0 1188 aa6.24□□□□□ -1.41
SCG2-202ENST00000421386 TATP17735 454 aaPredicted RBP6.24□□□□□ -1.41
SCG2-202ENST00000421386 EPHA4P54764 986 aa6.24□□□□□ -1.41
SCG2-202ENST00000421386 SFSWAPQ12872 951 aaKnown RBP6.24□□□□□ -1.41
SCG2-202ENST00000421386 NOLC1Q14978 699 aaKnown RBP eCLIP6.24□□□□□ -1.41
SCG2-202ENST00000421386 ELOA3BQ3SY89 546 aa6.24□□□□□ -1.41
SCG2-202ENST00000421386 LRRC69Q6ZNQ3 347 aa6.24□□□□□ -1.41
SCG2-202ENST00000421386 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.24□□□□□ -1.41
SCG2-202ENST00000421386 ELOA3Q8NG57 546 aa6.24□□□□□ -1.41
SCG2-202ENST00000421386 TBC1D22AQ8WUA7 517 aa6.24□□□□□ -1.41
SCG2-202ENST00000421386 CHMP4CQ96CF2 233 aa6.24□□□□□ -1.41
SCG2-202ENST00000421386 SGSM3Q96HU1 749 aa6.24□□□□□ -1.41
SCG2-202ENST00000421386 DEF6Q9H4E7 631 aa6.24□□□□□ -1.41
SCG2-202ENST00000421386 CXorf56Q9H5V9 222 aa6.24□□□□□ -1.41
SCG2-202ENST00000421386 ZNF358Q9NW07 568 aa6.24□□□□□ -1.41
SCG2-202ENST00000421386 PAXBP1Q9Y5B6 917 aa6.24□□□□□ -1.41
SCG2-202ENST00000421386 CGNL1Q0VF96 1302 aa6.24□□□□□ -1.41
SCG2-202ENST00000421386 CTAGE5O15320 804 aa6.23□□□□□ -1.41
SCG2-202ENST00000421386 ALBP02768 609 aa6.23□□□□□ -1.41
SCG2-202ENST00000421386 ATP2B1P20020 1258 aa6.23□□□□□ -1.41
SCG2-202ENST00000421386 SOX11P35716 441 aa6.23□□□□□ -1.41
SCG2-202ENST00000421386 UVSSAQ2YD98 709 aa6.23□□□□□ -1.41
SCG2-202ENST00000421386 LRCH2Q5VUJ6 765 aa6.23□□□□□ -1.41
SCG2-202ENST00000421386 BICDL1Q6ZP65 573 aa6.23□□□□□ -1.41
SCG2-202ENST00000421386 HSCBQ8IWL3 235 aa6.23□□□□□ -1.41
SCG2-202ENST00000421386 KIF18AQ8NI77 898 aa6.23□□□□□ -1.41
SCG2-202ENST00000421386 CEP89Q96ST8 783 aa6.23□□□□□ -1.41
SCG2-202ENST00000421386 PAIP2Q9BPZ3 127 aaKnown RBP6.23□□□□□ -1.41
SCG2-202ENST00000421386 SCHIP1Q9P0W5 487 aaPredicted RBP6.23□□□□□ -1.41
SCG2-202ENST00000421386 JRKLQ9Y4A0 524 aa6.23□□□□□ -1.41
SCG2-202ENST00000421386 MRVI1Q9Y6F6 885 aa6.23□□□□□ -1.41
SCG2-202ENST00000421386 RTEL1-TNFRSF6BF6WH68 1400 aa6.23□□□□□ -1.41
SCG2-202ENST00000421386 TIAM1Q13009 1591 aa6.23□□□□□ -1.41
SCG2-202ENST00000421386 PLEKHH1Q9ULM0 1364 aa6.22□□□□□ -1.41
SCG2-202ENST00000421386 TOP2AP11388 1531 aaKnown RBP6.22□□□□□ -1.41
SCG2-202ENST00000421386 ANKRD33BA6NCL7 494 aa6.22□□□□□ -1.41
SCG2-202ENST00000421386 M0R082 166 aa6.22□□□□□ -1.41
SCG2-202ENST00000421386 EML1O00423 815 aa6.22□□□□□ -1.41
SCG2-202ENST00000421386 DYRK3O43781 588 aa6.22□□□□□ -1.41
SCG2-202ENST00000421386 HNRNPH2P55795 449 aaKnown RBP6.22□□□□□ -1.41
SCG2-202ENST00000421386 MTA1Q13330 715 aa6.22□□□□□ -1.41
SCG2-202ENST00000421386 KANK4Q5T7N3 995 aaPredicted RBP6.22□□□□□ -1.41
SCG2-202ENST00000421386 IQUBQ8NA54 791 aa6.22□□□□□ -1.41
SCG2-202ENST00000421386 ZNF417Q8TAU3 575 aa6.22□□□□□ -1.41
SCG2-202ENST00000421386 TNPO1Q92973 898 aaKnown RBP6.22□□□□□ -1.41
SCG2-202ENST00000421386 L3MBTL2Q969R5 705 aa6.22□□□□□ -1.41
SCG2-202ENST00000421386 KIF1BPQ96EK5 621 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms