RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 NMIQ13287 307 aaPredicted RBP8.84□□□□□ -0.99
BDNF-209ENST00000420794 TRIM34Q9BYJ4 488 aa8.84□□□□□ -0.99
BDNF-209ENST00000420794 SLKQ9H2G2 1235 aaPredicted RBP8.84□□□□□ -0.99
BDNF-209ENST00000420794 KIF3AQ9Y496 699 aa8.84□□□□□ -0.99
BDNF-209ENST00000420794 ZNF804BA4D1E1 1349 aa8.84□□□□□ -0.99
BDNF-209ENST00000420794 ERICH2A1L162 156 aa8.83□□□□□ -1
BDNF-209ENST00000420794 SPATA5Q8NB90 893 aa8.83□□□□□ -1
BDNF-209ENST00000420794 SUPT20HQ8NEM7 779 aa8.83□□□□□ -1
BDNF-209ENST00000420794 IL27Q8NEV9 243 aa8.83□□□□□ -1
BDNF-209ENST00000420794 UBE2Q2Q8WVN8 375 aa8.83□□□□□ -1
BDNF-209ENST00000420794 MASTLQ96GX5 879 aa8.83□□□□□ -1
BDNF-209ENST00000420794 TLR7Q9NYK1 1049 aaKnown RBP8.83□□□□□ -1
BDNF-209ENST00000420794 RIPOR2Q9Y4F9 1068 aa8.83□□□□□ -1
BDNF-209ENST00000420794 PPEF1O14829 653 aaPredicted RBP8.83□□□□□ -1
BDNF-209ENST00000420794 BAG3O95817 575 aa8.83□□□□□ -1
BDNF-209ENST00000420794 PRPF40BQ6NWY9 871 aaKnown RBP8.83□□□□□ -1
BDNF-209ENST00000420794 ATG9AQ7Z3C6 839 aa8.83□□□□□ -1
BDNF-209ENST00000420794 HELLSQ9NRZ9 838 aa8.83□□□□□ -1
BDNF-209ENST00000420794 CYP7A1P22680 504 aa8.83□□□□□ -1
BDNF-209ENST00000420794 ZAP70P43403 619 aa8.83□□□□□ -1
BDNF-209ENST00000420794 NAA16Q6N069 864 aaPredicted RBP8.83□□□□□ -1
BDNF-209ENST00000420794 BLOC1S2Q6QNY1 142 aa8.83□□□□□ -1
BDNF-209ENST00000420794 WDR66Q8TBY9 1149 aa8.83□□□□□ -1
BDNF-209ENST00000420794 CELF1Q92879 486 aaKnown RBP8.83□□□□□ -1
BDNF-209ENST00000420794 NAPBQ9H115 298 aa8.83□□□□□ -1
BDNF-209ENST00000420794 RBM5P52756 815 aaKnown RBP eCLIP8.83□□□□□ -1
BDNF-209ENST00000420794 SART3Q15020 963 aaKnown RBP8.83□□□□□ -1
BDNF-209ENST00000420794 CPLX2Q6PUV4 134 aaKnown RBP8.83□□□□□ -1
BDNF-209ENST00000420794 RIMBP2O15034 1052 aa8.82□□□□□ -1
BDNF-209ENST00000420794 ADORA1P30542 326 aa8.82□□□□□ -1
BDNF-209ENST00000420794 ANKRD1Q15327 319 aa8.82□□□□□ -1
BDNF-209ENST00000420794 HMG20BQ9P0W2 317 aa8.82□□□□□ -1
BDNF-209ENST00000420794 MINPP1Q9UNW1 487 aa8.82□□□□□ -1
BDNF-209ENST00000420794 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.82□□□□□ -1
BDNF-209ENST00000420794 JAKMIP1Q96N16 626 aaKnown RBP8.82□□□□□ -1
BDNF-209ENST00000420794 DOT1LQ8TEK3 1739 aa8.82□□□□□ -1
BDNF-209ENST00000420794 SEMA3EO15041 775 aa8.82□□□□□ -1
BDNF-209ENST00000420794 SGSM2O43147 1006 aa8.82□□□□□ -1
BDNF-209ENST00000420794 EPB41L2O43491 1005 aaKnown RBP8.82□□□□□ -1
BDNF-209ENST00000420794 GYG1P46976 350 aa8.82□□□□□ -1
BDNF-209ENST00000420794 BCAMP50895 628 aa8.82□□□□□ -1
BDNF-209ENST00000420794 ANAPC15P60006 121 aa8.82□□□□□ -1
BDNF-209ENST00000420794 CC2D2BQ6DHV5 1058 aa8.82□□□□□ -1
BDNF-209ENST00000420794 PI4K2BQ8TCG2 481 aa8.82□□□□□ -1
BDNF-209ENST00000420794 ZNF213O14771 459 aa8.81□□□□□ -1
BDNF-209ENST00000420794 LDHBP07195 334 aaKnown RBP8.81□□□□□ -1
BDNF-209ENST00000420794 PHKA1P46020 1223 aa8.81□□□□□ -1
BDNF-209ENST00000420794 SLC4A3P48751 1232 aa8.81□□□□□ -1
BDNF-209ENST00000420794 TICAM2Q86XR7 235 aa8.81□□□□□ -1
BDNF-209ENST00000420794 APPBP2Q92624 585 aa8.81□□□□□ -1
BDNF-209ENST00000420794 CRAMP1Q96RY5 1269 aa8.81□□□□□ -1
BDNF-209ENST00000420794 GNAT2P19087 354 aa8.81□□□□□ -1
BDNF-209ENST00000420794 NCLP19338 710 aaKnown RBP8.81□□□□□ -1
BDNF-209ENST00000420794 USP5P45974 858 aa8.81□□□□□ -1
BDNF-209ENST00000420794 MAGEB6Q8N7X4 407 aa8.81□□□□□ -1
BDNF-209ENST00000420794 ATF5Q9Y2D1 282 aaPredicted RBP8.81□□□□□ -1
BDNF-209ENST00000420794 HMGB1P09429 215 aaKnown RBP8.81□□□□□ -1
BDNF-209ENST00000420794 SOGA3Q5TF21 947 aa8.81□□□□□ -1
BDNF-209ENST00000420794 TBC1D22AQ8WUA7 517 aa8.81□□□□□ -1
BDNF-209ENST00000420794 FOXD4L1Q9NU39 408 aa8.81□□□□□ -1
BDNF-209ENST00000420794 NDUFB9Q9Y6M9 179 aa8.81□□□□□ -1
BDNF-209ENST00000420794 CCDC171Q6TFL3 1326 aa8.81□□□□□ -1
BDNF-209ENST00000420794 GLI3P10071 1580 aa8.81□□□□□ -1
BDNF-209ENST00000420794 NRAPQ86VF7 1730 aa8.81□□□□□ -1
BDNF-209ENST00000420794 DCAF8L1A6NGE4 600 aa8.8□□□□□ -1
BDNF-209ENST00000420794 SEC24BO95487 1268 aa8.8□□□□□ -1
BDNF-209ENST00000420794 NFXL1Q6ZNB6 911 aa8.8□□□□□ -1
BDNF-209ENST00000420794 EDC3Q96F86 508 aaKnown RBP8.8□□□□□ -1
BDNF-209ENST00000420794 USP26Q9BXU7 913 aa8.8□□□□□ -1
BDNF-209ENST00000420794 CRNKL1Q9BZJ0 848 aaKnown RBP8.8□□□□□ -1
BDNF-209ENST00000420794 BCL2L12Q9HB09 334 aa8.8□□□□□ -1
BDNF-209ENST00000420794 TMOD2Q9NZR1 351 aa8.8□□□□□ -1
BDNF-209ENST00000420794 ISY1Q9ULR0 285 aaKnown RBP8.8□□□□□ -1
BDNF-209ENST00000420794 ZNF827Q17R98 1081 aa8.8□□□□□ -1
BDNF-209ENST00000420794 JDP2Q8WYK2 163 aa8.8□□□□□ -1
BDNF-209ENST00000420794 RBM8AQ9Y5S9 174 aaKnown RBP8.8□□□□□ -1
BDNF-209ENST00000420794 CASTP20810 708 aaKnown RBP8.8□□□□□ -1
BDNF-209ENST00000420794 RRP12Q5JTH9 1297 aaKnown RBP8.8□□□□□ -1
BDNF-209ENST00000420794 RNF41Q9H4P4 317 aaPredicted RBP8.8□□□□□ -1
BDNF-209ENST00000420794 ZNF287Q9HBT7 754 aa8.8□□□□□ -1
BDNF-209ENST00000420794 PDRG1Q9NUG6 133 aa8.8□□□□□ -1
BDNF-209ENST00000420794 MAGEB6P1A0A0J9YX57 407 aa8.8□□□□□ -1
BDNF-209ENST00000420794 CPLX1O14810 134 aa8.8□□□□□ -1
BDNF-209ENST00000420794 ZBTB7AO95365 584 aa8.8□□□□□ -1
BDNF-209ENST00000420794 ILDR1Q86SU0 546 aaPredicted RBP8.8□□□□□ -1
BDNF-209ENST00000420794 FAM227BQ96M60 508 aa8.8□□□□□ -1
BDNF-209ENST00000420794 TTLL6Q8N841 843 aa8.79□□□□□ -1
BDNF-209ENST00000420794 TAOK2Q9UL54 1235 aa8.79□□□□□ -1
BDNF-209ENST00000420794 K7ELQ4 463 aaPredicted RBP8.79□□□□□ -1
BDNF-209ENST00000420794 PLCG2P16885 1265 aa8.79□□□□□ -1
BDNF-209ENST00000420794 FAM184AQ8NB25 1140 aa8.79□□□□□ -1
BDNF-209ENST00000420794 UPF3BQ9BZI7 483 aaKnown RBP8.79□□□□□ -1
BDNF-209ENST00000420794 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.79□□□□□ -1
BDNF-209ENST00000420794 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.79□□□□□ -1
BDNF-209ENST00000420794 RTL9Q8NET4 1388 aa8.79□□□□□ -1
BDNF-209ENST00000420794 MINDY4BA8MYZ0 360 aa8.79□□□□□ -1
BDNF-209ENST00000420794 POLRMTO00411 1230 aaKnown RBP8.79□□□□□ -1
BDNF-209ENST00000420794 GRIPAP1Q4V328 841 aa8.79□□□□□ -1
BDNF-209ENST00000420794 CERS3Q8IU89 383 aa8.79□□□□□ -1
BDNF-209ENST00000420794 SP8Q8IXZ3 490 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms