RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 AOPEPQ8N6M6 819 aa17.76■□□□□ 0.43
SEMA3B-203ENST00000419007 ZNF396Q96N95 335 aaPredicted RBP17.76■□□□□ 0.43
SEMA3B-203ENST00000419007 CAVIN2O95810 425 aa17.76■□□□□ 0.43
SEMA3B-203ENST00000419007 ADD1P35611 737 aaKnown RBP17.76■□□□□ 0.43
SEMA3B-203ENST00000419007 RAB11FIP4Q86YS3 637 aa17.76■□□□□ 0.43
SEMA3B-203ENST00000419007 SMARCC2Q8TAQ2 1214 aa17.76■□□□□ 0.43
SEMA3B-203ENST00000419007 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.76■□□□□ 0.437e-13■□□□□ 10.5
SEMA3B-203ENST00000419007 RCOR1Q9UKL0 485 aa17.76■□□□□ 0.43
SEMA3B-203ENST00000419007 V9GYY5 206 aaPredicted RBP17.76■□□□□ 0.43
SEMA3B-203ENST00000419007 FMNL2Q96PY5 1086 aa17.75■□□□□ 0.43
SEMA3B-203ENST00000419007 CTAGE5O15320 804 aa17.75■□□□□ 0.43
SEMA3B-203ENST00000419007 TTLL5Q6EMB2 1281 aa17.75■□□□□ 0.43
SEMA3B-203ENST00000419007 NAA16Q6N069 864 aaPredicted RBP17.75■□□□□ 0.43
SEMA3B-203ENST00000419007 LLPHQ9BRT6 129 aaKnown RBP17.75■□□□□ 0.43
SEMA3B-203ENST00000419007 ERBB3P21860 1342 aa17.75■□□□□ 0.43
SEMA3B-203ENST00000419007 A0A1B0GVL5 298 aa17.74■□□□□ 0.43
SEMA3B-203ENST00000419007 HAND2P61296 217 aa17.74■□□□□ 0.43
SEMA3B-203ENST00000419007 DMTNQ08495 405 aa17.74■□□□□ 0.43
SEMA3B-203ENST00000419007 ANO10Q9NW15 660 aa17.74■□□□□ 0.43
SEMA3B-203ENST00000419007 CCDC69A6NI79 296 aa17.74■□□□□ 0.43
SEMA3B-203ENST00000419007 E7EWF7 191 aa17.74■□□□□ 0.43
SEMA3B-203ENST00000419007 POLR3DP05423 398 aaPredicted RBP17.74■□□□□ 0.43
SEMA3B-203ENST00000419007 PHKG2P15735 406 aa17.74■□□□□ 0.43
SEMA3B-203ENST00000419007 CEP57L1Q8IYX8 460 aa17.74■□□□□ 0.43
SEMA3B-203ENST00000419007 GPHNQ9NQX3 736 aaPredicted RBP17.74■□□□□ 0.43
SEMA3B-203ENST00000419007 PAXBP1Q9Y5B6 917 aa17.74■□□□□ 0.43
SEMA3B-203ENST00000419007 FKBP4Q02790 459 aaKnown RBP eCLIP17.74■□□□□ 0.43
SEMA3B-203ENST00000419007 FAM160A1Q05DH4 1040 aa17.74■□□□□ 0.43
SEMA3B-203ENST00000419007 PTPN14Q15678 1187 aa17.74■□□□□ 0.43
SEMA3B-203ENST00000419007 ZNF594Q96JF6 807 aaPredicted RBP17.74■□□□□ 0.43
SEMA3B-203ENST00000419007 SNW1Q13573 536 aaKnown RBP17.73■□□□□ 0.43
SEMA3B-203ENST00000419007 HSPD1P10809 573 aaKnown RBP17.73■□□□□ 0.43
SEMA3B-203ENST00000419007 BIN1O00499 593 aa17.73■□□□□ 0.43
SEMA3B-203ENST00000419007 IFIT1P09914 478 aaKnown RBP17.73■□□□□ 0.43
SEMA3B-203ENST00000419007 NPHP1O15259 732 aa17.72■□□□□ 0.43
SEMA3B-203ENST00000419007 PDIA3P30101 505 aaKnown RBP17.72■□□□□ 0.43
SEMA3B-203ENST00000419007 RABL6Q3YEC7 729 aaPredicted RBP17.72■□□□□ 0.43
SEMA3B-203ENST00000419007 IFNL2Q8IZJ0 200 aa17.72■□□□□ 0.43
SEMA3B-203ENST00000419007 MRFAP1L1Q96HT8 127 aa17.72■□□□□ 0.43
SEMA3B-203ENST00000419007 USP54Q70EL1 1684 aa17.72■□□□□ 0.43
SEMA3B-203ENST00000419007 OVOS2A0A0G2JMS6 1433 aa17.72■□□□□ 0.43
SEMA3B-203ENST00000419007 STK38Q15208 465 aa17.72■□□□□ 0.43
SEMA3B-203ENST00000419007 WASHC4Q2M389 1173 aa17.72■□□□□ 0.43
SEMA3B-203ENST00000419007 CABP4P57796 275 aa17.71■□□□□ 0.43
SEMA3B-203ENST00000419007 DHX40Q8IX18 779 aaKnown RBP17.71■□□□□ 0.43
SEMA3B-203ENST00000419007 SMC2O95347 1197 aa17.71■□□□□ 0.43
SEMA3B-203ENST00000419007 CDC25BP30305 580 aa17.71■□□□□ 0.43
SEMA3B-203ENST00000419007 CHRNA2Q15822 529 aa17.71■□□□□ 0.43
SEMA3B-203ENST00000419007 LRRC24Q50LG9 513 aa17.71■□□□□ 0.43
SEMA3B-203ENST00000419007 HSP90AB3PQ58FF7 597 aa17.71■□□□□ 0.43
SEMA3B-203ENST00000419007 GORABQ5T7V8 394 aa17.71■□□□□ 0.43
SEMA3B-203ENST00000419007 PCDHA7Q9UN72 937 aa17.71■□□□□ 0.43
SEMA3B-203ENST00000419007 SH3TC1Q8TE82 1336 aa17.71■□□□□ 0.43
SEMA3B-203ENST00000419007 SARM1Q6SZW1 724 aa17.71■□□□□ 0.42
SEMA3B-203ENST00000419007 CABLES1Q8TDN4 633 aa17.71■□□□□ 0.42
SEMA3B-203ENST00000419007 MRPS27Q92552 414 aaKnown RBP17.71■□□□□ 0.42
SEMA3B-203ENST00000419007 CCDC85AQ96PX6 553 aaPredicted RBP17.71■□□□□ 0.42
SEMA3B-203ENST00000419007 NAT10Q9H0A0 1025 aaKnown RBP17.71■□□□□ 0.42
SEMA3B-203ENST00000419007 ZNF330Q9Y3S2 320 aaPredicted RBP17.71■□□□□ 0.42
SEMA3B-203ENST00000419007 KDM6AO15550 1401 aaPredicted RBP17.71■□□□□ 0.42
SEMA3B-203ENST00000419007 SYTL4Q96C24 671 aaPredicted RBP17.7■□□□□ 0.42
SEMA3B-203ENST00000419007 HELLSQ9NRZ9 838 aa17.7■□□□□ 0.42
SEMA3B-203ENST00000419007 GJB4Q9NTQ9 266 aa17.7■□□□□ 0.42
SEMA3B-203ENST00000419007 EXOSC10Q01780 885 aaKnown RBP17.7■□□□□ 0.42
SEMA3B-203ENST00000419007 ISM2Q6H9L7 571 aa17.7■□□□□ 0.42
SEMA3B-203ENST00000419007 DSCC1Q9BVC3 393 aa17.7■□□□□ 0.42
SEMA3B-203ENST00000419007 ZBTB3Q9H5J0 574 aa17.7■□□□□ 0.42
SEMA3B-203ENST00000419007 MAST3O60307 1309 aa17.7■□□□□ 0.42
SEMA3B-203ENST00000419007 NDUFA8P51970 172 aa17.69■□□□□ 0.42
SEMA3B-203ENST00000419007 LRP10Q7Z4F1 713 aa17.69■□□□□ 0.42
SEMA3B-203ENST00000419007 ILDR1Q86SU0 546 aaPredicted RBP17.69■□□□□ 0.42
SEMA3B-203ENST00000419007 ENGASEQ8NFI3 743 aa17.69■□□□□ 0.42
SEMA3B-203ENST00000419007 ZNF215Q9UL58 517 aaPredicted RBP17.69■□□□□ 0.42
SEMA3B-203ENST00000419007 CARMIL3Q8ND23 1372 aa17.69■□□□□ 0.42
SEMA3B-203ENST00000419007 NEMFO60524 1076 aa17.69■□□□□ 0.42
SEMA3B-203ENST00000419007 ZMYM1Q5SVZ6 1142 aa17.69■□□□□ 0.42
SEMA3B-203ENST00000419007 ATG9AQ7Z3C6 839 aa17.69■□□□□ 0.42
SEMA3B-203ENST00000419007 PLBD2Q8NHP8 589 aa17.69■□□□□ 0.42
SEMA3B-203ENST00000419007 A0A1B0GUL7 405 aa17.68■□□□□ 0.42
SEMA3B-203ENST00000419007 TTLL7Q6ZT98 887 aa17.68■□□□□ 0.42
SEMA3B-203ENST00000419007 C8orf76Q96K31 380 aa17.68■□□□□ 0.42
SEMA3B-203ENST00000419007 CLIC4Q9Y696 253 aa17.68■□□□□ 0.42
SEMA3B-203ENST00000419007 M0R2C6 588 aa17.68■□□□□ 0.42
SEMA3B-203ENST00000419007 CPLX1O14810 134 aa17.68■□□□□ 0.42
SEMA3B-203ENST00000419007 RNF113AO15541 343 aaKnown RBP17.68■□□□□ 0.42
SEMA3B-203ENST00000419007 DPCR1Q3MIW9 517 aa17.68■□□□□ 0.42
SEMA3B-203ENST00000419007 CYP27B1O15528 508 aa17.67■□□□□ 0.42
SEMA3B-203ENST00000419007 CGNQ9P2M7 1197 aaKnown RBP17.67■□□□□ 0.42
SEMA3B-203ENST00000419007 FDPSP14324 419 aaKnown RBP17.67■□□□□ 0.42
SEMA3B-203ENST00000419007 FOXO4P98177 505 aa17.67■□□□□ 0.42
SEMA3B-203ENST00000419007 UTP14CQ5TAP6 766 aaKnown RBP17.67■□□□□ 0.42
SEMA3B-203ENST00000419007 CADPS2Q86UW7 1296 aa17.67■□□□□ 0.42
SEMA3B-203ENST00000419007 PUS3Q9BZE2 481 aaKnown RBP17.67■□□□□ 0.42
SEMA3B-203ENST00000419007 RFX7Q2KHR2 1363 aa17.67■□□□□ 0.42
SEMA3B-203ENST00000419007 CCZ1BP86790 482 aa17.67■□□□□ 0.42
SEMA3B-203ENST00000419007 CCZ1P86791 482 aaPredicted RBP17.67■□□□□ 0.42
SEMA3B-203ENST00000419007 DCAF5Q96JK2 942 aa17.67■□□□□ 0.42
SEMA3B-203ENST00000419007 FEZ1Q99689 392 aa17.67■□□□□ 0.42
SEMA3B-203ENST00000419007 CWC25Q9NXE8 425 aaPredicted RBP17.67■□□□□ 0.42
SEMA3B-203ENST00000419007 MRC1P22897 1456 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms