RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 PA2G4Q9UQ80 394 aaKnown RBP23.25■■□□□ 1.31
PTCD3-204ENST00000418628 ATP8B2P98198 1209 aa23.24■■□□□ 1.31
PTCD3-204ENST00000418628 CEP85Q6P2H3 762 aa23.24■■□□□ 1.31
PTCD3-204ENST00000418628 PDE8BO95263 885 aa23.23■■□□□ 1.31
PTCD3-204ENST00000418628 FGFR2P21802 821 aa23.23■■□□□ 1.31
PTCD3-204ENST00000418628 DOK7Q18PE1 504 aa23.23■■□□□ 1.31
PTCD3-204ENST00000418628 AKAP11Q9UKA4 1901 aa23.23■■□□□ 1.31
PTCD3-204ENST00000418628 METTL24Q5JXM2 366 aa23.22■■□□□ 1.31
PTCD3-204ENST00000418628 CIAPIN1Q6FI81 312 aa23.22■■□□□ 1.31
PTCD3-204ENST00000418628 PODNQ7Z5L7 613 aa23.22■■□□□ 1.31
PTCD3-204ENST00000418628 COA1Q9GZY4 146 aa23.22■■□□□ 1.31
PTCD3-204ENST00000418628 IL15P40933 162 aaPredicted RBP23.21■■□□□ 1.31
PTCD3-204ENST00000418628 KCNJ4P48050 445 aa23.21■■□□□ 1.31
PTCD3-204ENST00000418628 SCNN1DP51172 638 aa23.21■■□□□ 1.31
PTCD3-204ENST00000418628 SIL1Q9H173 461 aa23.21■■□□□ 1.31
PTCD3-204ENST00000418628 KCNQ5Q9NR82 932 aa23.21■■□□□ 1.31
PTCD3-204ENST00000418628 RAD17O75943 681 aa23.2■■□□□ 1.3
PTCD3-204ENST00000418628 CHMP4BQ9H444 224 aaKnown RBP23.2■■□□□ 1.3
PTCD3-204ENST00000418628 RRAGCQ9HB90 399 aa23.2■■□□□ 1.3
PTCD3-204ENST00000418628 PSMD14O00487 310 aa23.19■■□□□ 1.3
PTCD3-204ENST00000418628 PUM3Q15397 648 aaKnown RBP23.19■■□□□ 1.3
PTCD3-204ENST00000418628 TRPM7Q96QT4 1865 aa23.18■■□□□ 1.3
PTCD3-204ENST00000418628 VIL1P09327 827 aaKnown RBP23.18■■□□□ 1.3
PTCD3-204ENST00000418628 IL1R1P14778 569 aa23.18■■□□□ 1.3
PTCD3-204ENST00000418628 VEGFAP15692 232 aaPredicted RBP23.18■■□□□ 1.3
PTCD3-204ENST00000418628 TNIP1Q15025 636 aa23.18■■□□□ 1.3
PTCD3-204ENST00000418628 NOP58Q9Y2X3 529 aaKnown RBP23.18■■□□□ 1.3
PTCD3-204ENST00000418628 MYO5AQ9Y4I1 1855 aaKnown RBP23.17■■□□□ 1.3
PTCD3-204ENST00000418628 IQCA1LA6NCM1 817 aa23.17■■□□□ 1.3
PTCD3-204ENST00000418628 SIRT2Q8IXJ6 389 aa23.17■■□□□ 1.3
PTCD3-204ENST00000418628 FAM84BQ96KN1 310 aaPredicted RBP23.17■■□□□ 1.3
PTCD3-204ENST00000418628 CD209Q9NNX6 404 aa23.17■■□□□ 1.3
PTCD3-204ENST00000418628 GJA3Q9Y6H8 435 aa23.17■■□□□ 1.3
PTCD3-204ENST00000418628 ZNF804AQ7Z570 1209 aa23.16■■□□□ 1.3
PTCD3-204ENST00000418628 GPRC5DQ9NZD1 345 aa23.16■■□□□ 1.3
PTCD3-204ENST00000418628 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.16■■□□□ 1.3
PTCD3-204ENST00000418628 GMPSP49915 693 aaPredicted RBP23.15■■□□□ 1.3
PTCD3-204ENST00000418628 FBXO33Q7Z6M2 555 aa23.15■■□□□ 1.3
PTCD3-204ENST00000418628 RPAP2Q8IXW5 612 aaPredicted RBP23.15■■□□□ 1.3
PTCD3-204ENST00000418628 LPIN2Q92539 896 aa23.15■■□□□ 1.3
PTCD3-204ENST00000418628 GMLQ99445 158 aa23.15■■□□□ 1.3
PTCD3-204ENST00000418628 TAF1DQ9H5J8 278 aaPredicted RBP23.15■■□□□ 1.3
PTCD3-204ENST00000418628 HACL1Q9UJ83 578 aa23.15■■□□□ 1.3
PTCD3-204ENST00000418628 COL1A1P02452 1464 aaPredicted RBP23.14■■□□□ 1.29
PTCD3-204ENST00000418628 ZBTB22O15209 634 aa23.14■■□□□ 1.29
PTCD3-204ENST00000418628 RPS12P25398 132 aaKnown RBP23.14■■□□□ 1.29
PTCD3-204ENST00000418628 DACT2Q5SW24 774 aa23.14■■□□□ 1.29
PTCD3-204ENST00000418628 DPF2Q92785 391 aa23.14■■□□□ 1.29
PTCD3-204ENST00000418628 CEP126Q9P2H0 1117 aa23.14■■□□□ 1.29
PTCD3-204ENST00000418628 USP17L3A6NCW0 530 aa23.13■■□□□ 1.29
PTCD3-204ENST00000418628 USP17L4A6NCW7 530 aa23.13■■□□□ 1.29
PTCD3-204ENST00000418628 G3V3G9 751 aa23.13■■□□□ 1.29
PTCD3-204ENST00000418628 SASH1O94885 1247 aa23.13■■□□□ 1.29
PTCD3-204ENST00000418628 GYG1P46976 350 aa23.13■■□□□ 1.29
PTCD3-204ENST00000418628 ATP2B3Q16720 1220 aa23.13■■□□□ 1.29
PTCD3-204ENST00000418628 DCAF8Q5TAQ9 597 aa23.13■■□□□ 1.29
PTCD3-204ENST00000418628 STRIP1Q5VSL9 837 aa23.13■■□□□ 1.29
PTCD3-204ENST00000418628 USP17L1Q7RTZ2 530 aa23.13■■□□□ 1.29
PTCD3-204ENST00000418628 TDRD7Q8NHU6 1098 aaKnown RBP23.13■■□□□ 1.29
PTCD3-204ENST00000418628 EPHX2P34913 555 aa23.12■■□□□ 1.29
PTCD3-204ENST00000418628 EPS15P42566 896 aa23.12■■□□□ 1.29
PTCD3-204ENST00000418628 TFCP2Q12800 502 aa23.12■■□□□ 1.29
PTCD3-204ENST00000418628 RSBN1LQ6PCB5 846 aaPredicted RBP23.12■■□□□ 1.29
PTCD3-204ENST00000418628 AGBL3Q8NEM8 1001 aa23.12■■□□□ 1.29
PTCD3-204ENST00000418628 ZBTB12Q9Y330 459 aaPredicted RBP23.12■■□□□ 1.29
PTCD3-204ENST00000418628 DOCK2Q92608 1830 aa23.12■■□□□ 1.29
PTCD3-204ENST00000418628 FAM205AQ6ZU69 1335 aa23.11■■□□□ 1.29
PTCD3-204ENST00000418628 TOMM70O94826 608 aa23.11■■□□□ 1.29
PTCD3-204ENST00000418628 IFIT1P09914 478 aaKnown RBP23.11■■□□□ 1.29
PTCD3-204ENST00000418628 SLC5A1P13866 664 aa23.11■■□□□ 1.29
PTCD3-204ENST00000418628 HIBADHP31937 336 aaKnown RBP23.11■■□□□ 1.29
PTCD3-204ENST00000418628 RBM46Q8TBY0 533 aaKnown RBP23.11■■□□□ 1.29
PTCD3-204ENST00000418628 MYH2Q9UKX2 1941 aa23.11■■□□□ 1.29
PTCD3-204ENST00000418628 MYO3BQ8WXR4 1341 aa23.1■■□□□ 1.29
PTCD3-204ENST00000418628 MAST2Q6P0Q8 1798 aa23.1■■□□□ 1.29
PTCD3-204ENST00000418628 CRBNQ96SW2 442 aa23.1■■□□□ 1.29
PTCD3-204ENST00000418628 SHTN1A0MZ66 631 aa23.09■■□□□ 1.29
PTCD3-204ENST00000418628 POTEIP0CG38 1075 aa23.09■■□□□ 1.29
PTCD3-204ENST00000418628 POTEJP0CG39 1038 aa23.09■■□□□ 1.29
PTCD3-204ENST00000418628 LMOD1P29536 600 aaPredicted RBP23.09■■□□□ 1.29
PTCD3-204ENST00000418628 FKBP1AP62942 108 aaKnown RBP23.09■■□□□ 1.29
PTCD3-204ENST00000418628 G3BP1Q13283 466 aaKnown RBP eCLIP23.09■■□□□ 1.29
PTCD3-204ENST00000418628 GPR108Q9NPR9 543 aa23.09■■□□□ 1.29
PTCD3-204ENST00000418628 SURF6O75683 361 aaKnown RBP23.08■■□□□ 1.29
PTCD3-204ENST00000418628 ZNF280AP59817 542 aaPredicted RBP23.08■■□□□ 1.29
PTCD3-204ENST00000418628 TTLL5Q6EMB2 1281 aa23.08■■□□□ 1.29
PTCD3-204ENST00000418628 MICALL2Q8IY33 904 aa23.08■■□□□ 1.29
PTCD3-204ENST00000418628 ADARB2Q9NS39 739 aaKnown RBP23.08■■□□□ 1.29
PTCD3-204ENST00000418628 A0A1B0GUL7 405 aa23.07■■□□□ 1.28
PTCD3-204ENST00000418628 HMMRO75330 724 aa23.07■■□□□ 1.28
PTCD3-204ENST00000418628 BCAMP50895 628 aa23.07■■□□□ 1.28
PTCD3-204ENST00000418628 GTF2IP78347 998 aa23.07■■□□□ 1.28
PTCD3-204ENST00000418628 CAVIN4Q5BKX8 364 aa23.07■■□□□ 1.28
PTCD3-204ENST00000418628 PNMA8AQ86V59 439 aaPredicted RBP23.07■■□□□ 1.28
PTCD3-204ENST00000418628 CERS5Q8N5B7 392 aa23.07■■□□□ 1.28
PTCD3-204ENST00000418628 MXD3Q9BW11 206 aa23.07■■□□□ 1.28
PTCD3-204ENST00000418628 CNOT7Q9UIV1 285 aaKnown RBP23.07■■□□□ 1.28
PTCD3-204ENST00000418628 AKAP2Q9Y2D5 859 aa23.07■■□□□ 1.28
PTCD3-204ENST00000418628 MYH7P12883 1935 aa23.06■■□□□ 1.28
PTCD3-204ENST00000418628 ADORA1P30542 326 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms