RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 NOS3P29474 1203 aa6.5□□□□□ -1.37
HMGB3P20-201ENST00000417997 FAM117BQ6P1L5 589 aa6.5□□□□□ -1.37
HMGB3P20-201ENST00000417997 XKR5Q6UX68 686 aa6.5□□□□□ -1.37
HMGB3P20-201ENST00000417997 MAP4K3Q8IVH8 894 aa6.5□□□□□ -1.37
HMGB3P20-201ENST00000417997 CEP120Q8N960 986 aa6.5□□□□□ -1.37
HMGB3P20-201ENST00000417997 RETREG2Q8NC44 543 aa6.5□□□□□ -1.37
HMGB3P20-201ENST00000417997 DCAF11Q8TEB1 546 aa6.5□□□□□ -1.37
HMGB3P20-201ENST00000417997 CARD10Q9BWT7 1032 aa6.5□□□□□ -1.37
HMGB3P20-201ENST00000417997 TUT1Q9H6E5 874 aaKnown RBP6.5□□□□□ -1.37
HMGB3P20-201ENST00000417997 SRA1Q9HD15 236 aaKnown RBP6.5□□□□□ -1.37
HMGB3P20-201ENST00000417997 SH2B1Q9NRF2 756 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P20-201ENST00000417997 CCDC87Q9NVE4 849 aa6.5□□□□□ -1.37
HMGB3P20-201ENST00000417997 LOC100996750A0A140TA64 210 aa6.49□□□□□ -1.37
HMGB3P20-201ENST00000417997 FZD6O60353 706 aa6.49□□□□□ -1.37
HMGB3P20-201ENST00000417997 TRPA1O75762 1119 aa6.49□□□□□ -1.37
HMGB3P20-201ENST00000417997 ALX3O95076 343 aa6.49□□□□□ -1.37
HMGB3P20-201ENST00000417997 NPR3P17342 541 aa6.49□□□□□ -1.37
HMGB3P20-201ENST00000417997 USP5P45974 858 aa6.49□□□□□ -1.37
HMGB3P20-201ENST00000417997 SERPINB4P48594 390 aa6.49□□□□□ -1.37
HMGB3P20-201ENST00000417997 NKAPLQ5M9Q1 402 aa6.49□□□□□ -1.37
HMGB3P20-201ENST00000417997 GLYCTKQ8IVS8 523 aa6.49□□□□□ -1.37
HMGB3P20-201ENST00000417997 PMEPA1Q969W9 287 aa6.49□□□□□ -1.37
HMGB3P20-201ENST00000417997 POP1Q99575 1024 aaKnown RBP6.49□□□□□ -1.37
HMGB3P20-201ENST00000417997 KRTAP4-6Q9BYQ5 205 aa6.49□□□□□ -1.37
HMGB3P20-201ENST00000417997 MRPL18Q9H0U6 180 aaKnown RBP6.49□□□□□ -1.37
HMGB3P20-201ENST00000417997 AKTIPQ9H8T0 292 aa6.49□□□□□ -1.37
HMGB3P20-201ENST00000417997 FOXD3Q9UJU5 478 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P20-201ENST00000417997 SMARCA4P51532 1647 aa6.49□□□□□ -1.37
HMGB3P20-201ENST00000417997 EREGO14944 169 aa6.48□□□□□ -1.37
HMGB3P20-201ENST00000417997 TNFRSF21O75509 655 aa6.48□□□□□ -1.37
HMGB3P20-201ENST00000417997 EPHA1P21709 976 aa6.48□□□□□ -1.37
HMGB3P20-201ENST00000417997 CABP4P57796 275 aa6.48□□□□□ -1.37
HMGB3P20-201ENST00000417997 EHHADHQ08426 723 aa6.48□□□□□ -1.37
HMGB3P20-201ENST00000417997 SNX29Q8TEQ0 813 aa6.48□□□□□ -1.37
HMGB3P20-201ENST00000417997 CHRDQ9H2X0 955 aa6.48□□□□□ -1.37
HMGB3P20-201ENST00000417997 SALL4Q9UJQ4 1053 aa6.48□□□□□ -1.37
HMGB3P20-201ENST00000417997 PDE2AO00408 941 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P20-201ENST00000417997 ICMTO60725 284 aa6.47□□□□□ -1.37
HMGB3P20-201ENST00000417997 GLB1P16278 677 aa6.47□□□□□ -1.37
HMGB3P20-201ENST00000417997 CD68P34810 354 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P20-201ENST00000417997 ZMYM1Q5SVZ6 1142 aa6.47□□□□□ -1.37
HMGB3P20-201ENST00000417997 ADAMTSL4Q6UY14 1074 aa6.47□□□□□ -1.37
HMGB3P20-201ENST00000417997 AGGF1Q8N302 714 aaeCLIP6.47□□□□□ -1.37
HMGB3P20-201ENST00000417997 GALNT11Q8NCW6 608 aa6.47□□□□□ -1.37
HMGB3P20-201ENST00000417997 MEGF10Q96KG7 1140 aa6.47□□□□□ -1.37
HMGB3P20-201ENST00000417997 HHIPQ96QV1 700 aa6.47□□□□□ -1.37
HMGB3P20-201ENST00000417997 DZANK1Q9NVP4 752 aa6.47□□□□□ -1.37
HMGB3P20-201ENST00000417997 BRPF3Q9ULD4 1205 aa6.47□□□□□ -1.37
HMGB3P20-201ENST00000417997 CECR2Q9BXF3 1484 aa6.47□□□□□ -1.37
HMGB3P20-201ENST00000417997 F8W735 103 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P20-201ENST00000417997 FSCN2O14926 492 aa6.46□□□□□ -1.38
HMGB3P20-201ENST00000417997 ITGB7P26010 798 aa6.46□□□□□ -1.38
HMGB3P20-201ENST00000417997 ACAD11Q709F0 780 aa6.46□□□□□ -1.38
HMGB3P20-201ENST00000417997 MROH2BQ7Z745 1585 aa6.46□□□□□ -1.38
HMGB3P20-201ENST00000417997 SLC7A3Q8WY07 619 aa6.46□□□□□ -1.38
HMGB3P20-201ENST00000417997 OSMRQ99650 979 aa6.46□□□□□ -1.38
HMGB3P20-201ENST00000417997 EGFL7Q9UHF1 273 aa6.46□□□□□ -1.38
HMGB3P20-201ENST00000417997 WIZO95785 1651 aa6.45□□□□□ -1.38
HMGB3P20-201ENST00000417997 SCO2A0A1W2PP80 73 aa6.45□□□□□ -1.38
HMGB3P20-201ENST00000417997 POLR3DP05423 398 aaPredicted RBP6.45□□□□□ -1.38
HMGB3P20-201ENST00000417997 H2AFB1P0C5Y9 115 aa6.45□□□□□ -1.38
HMGB3P20-201ENST00000417997 H2AFB2P0C5Z0 115 aa6.45□□□□□ -1.38
HMGB3P20-201ENST00000417997 EDN3P14138 238 aa6.45□□□□□ -1.38
HMGB3P20-201ENST00000417997 PDE4CQ08493 712 aa6.45□□□□□ -1.38
HMGB3P20-201ENST00000417997 FOXD4L6Q3SYB3 417 aaPredicted RBP6.45□□□□□ -1.38
HMGB3P20-201ENST00000417997 PRSS36Q5K4E3 855 aa6.45□□□□□ -1.38
HMGB3P20-201ENST00000417997 FOXD4L3Q6VB84 417 aaPredicted RBP6.45□□□□□ -1.38
HMGB3P20-201ENST00000417997 GJD3Q8N144 294 aa6.45□□□□□ -1.38
HMGB3P20-201ENST00000417997 ASAP3Q8TDY4 903 aa6.45□□□□□ -1.38
HMGB3P20-201ENST00000417997 ZKSCAN3Q9BRR0 538 aa6.45□□□□□ -1.38
HMGB3P20-201ENST00000417997 SSBP4Q9BWG4 385 aaPredicted RBP6.45□□□□□ -1.38
HMGB3P20-201ENST00000417997 SEC31BQ9NQW1 1179 aa6.45□□□□□ -1.38
HMGB3P20-201ENST00000417997 RSF1Q96T23 1441 aaPredicted RBP6.44□□□□□ -1.38
HMGB3P20-201ENST00000417997 H3BRJ5 948 aa6.44□□□□□ -1.38
HMGB3P20-201ENST00000417997 DDX3YO15523 660 aaKnown RBP6.44□□□□□ -1.38
HMGB3P20-201ENST00000417997 NDUFB5O43674 189 aa6.44□□□□□ -1.38
HMGB3P20-201ENST00000417997 WISP1O95388 367 aa6.44□□□□□ -1.38
HMGB3P20-201ENST00000417997 DUOXA2Q1HG44 320 aa6.44□□□□□ -1.38
HMGB3P20-201ENST00000417997 TMEM130Q8N3G9 435 aa6.44□□□□□ -1.38
HMGB3P20-201ENST00000417997 KLHL23Q8NBE8 558 aa6.44□□□□□ -1.38
HMGB3P20-201ENST00000417997 ADAM19Q9H013 955 aa6.44□□□□□ -1.38
HMGB3P20-201ENST00000417997 LATS2Q9NRM7 1088 aa6.44□□□□□ -1.38
HMGB3P20-201ENST00000417997 KCNK4Q9NYG8 393 aa6.44□□□□□ -1.38
HMGB3P20-201ENST00000417997 AMOTL2Q9Y2J4 779 aa6.44□□□□□ -1.38
HMGB3P20-201ENST00000417997 NFKBIEO00221 500 aa6.43□□□□□ -1.38
HMGB3P20-201ENST00000417997 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.43□□□□□ -1.38
HMGB3P20-201ENST00000417997 TMC1Q8TDI8 760 aa6.43□□□□□ -1.38
HMGB3P20-201ENST00000417997 KLHDC7BQ96G42 594 aa6.43□□□□□ -1.38
HMGB3P20-201ENST00000417997 ARL4DP49703 201 aa6.42□□□□□ -1.38
HMGB3P20-201ENST00000417997 NLRP12P59046 1061 aa6.42□□□□□ -1.38
HMGB3P20-201ENST00000417997 PIP4K2BP78356 416 aa6.42□□□□□ -1.38
HMGB3P20-201ENST00000417997 Q8N3U1 123 aa6.42□□□□□ -1.38
HMGB3P20-201ENST00000417997 TMEM102Q8N9M5 508 aaPredicted RBP6.42□□□□□ -1.38
HMGB3P20-201ENST00000417997 CCER1Q8TC90 406 aaPredicted RBP6.42□□□□□ -1.38
HMGB3P20-201ENST00000417997 UBASH3BQ8TF42 649 aa6.42□□□□□ -1.38
HMGB3P20-201ENST00000417997 NXPE3Q969Y0 559 aa6.42□□□□□ -1.38
HMGB3P20-201ENST00000417997 ZFYVE28Q9HCC9 887 aa6.42□□□□□ -1.38
HMGB3P20-201ENST00000417997 ARHGAP4P98171 946 aa6.41□□□□□ -1.38
HMGB3P20-201ENST00000417997 IKBKEQ14164 716 aa6.41□□□□□ -1.38
HMGB3P20-201ENST00000417997 FOXD4L4Q8WXT5 416 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms