RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 EFCAB8A8MWE9 144 aa11.65□□□□□ -0.54
SATB1-204ENST00000417717 SURF6O75683 361 aaKnown RBP11.65□□□□□ -0.54
SATB1-204ENST00000417717 TNNC1P63316 161 aa11.65□□□□□ -0.54
SATB1-204ENST00000417717 C8orf34Q49A92 452 aa11.65□□□□□ -0.54
SATB1-204ENST00000417717 GKAP1Q5VSY0 366 aaPredicted RBP11.65□□□□□ -0.54
SATB1-204ENST00000417717 CNNM3Q8NE01 707 aa11.65□□□□□ -0.54
SATB1-204ENST00000417717 Q9H521 79 aa11.65□□□□□ -0.54
SATB1-204ENST00000417717 BATF3Q9NR55 127 aa11.65□□□□□ -0.54
SATB1-204ENST00000417717 E7EVH7 732 aa11.65□□□□□ -0.54
SATB1-204ENST00000417717 MAP3K7CLP57077 242 aa11.65□□□□□ -0.54
SATB1-204ENST00000417717 ERCC6LQ2NKX8 1250 aa11.65□□□□□ -0.54
SATB1-204ENST00000417717 SMC1BQ8NDV3 1235 aa11.65□□□□□ -0.54
SATB1-204ENST00000417717 SMIM23A6NLE4 172 aa11.65□□□□□ -0.55
SATB1-204ENST00000417717 KRT18P05783 430 aaKnown RBP11.65□□□□□ -0.55
SATB1-204ENST00000417717 KIF5AQ12840 1032 aa11.65□□□□□ -0.55
SATB1-204ENST00000417717 SF3B2Q13435 895 aaKnown RBP11.65□□□□□ -0.55
SATB1-204ENST00000417717 RPAP2Q8IXW5 612 aaPredicted RBP11.65□□□□□ -0.55
SATB1-204ENST00000417717 WASF1Q92558 559 aa11.65□□□□□ -0.55
SATB1-204ENST00000417717 ZNF428Q96B54 188 aa11.65□□□□□ -0.55
SATB1-204ENST00000417717 BAG1Q99933 345 aaPredicted RBP11.65□□□□□ -0.55
SATB1-204ENST00000417717 PLVAPQ9BX97 442 aa11.65□□□□□ -0.55
SATB1-204ENST00000417717 CHMP2AO43633 222 aa11.64□□□□□ -0.55
SATB1-204ENST00000417717 ATP2A2P16615 1042 aaKnown RBP11.64□□□□□ -0.55
SATB1-204ENST00000417717 TEX11Q8IYF3 940 aa11.64□□□□□ -0.55
SATB1-204ENST00000417717 DNAJC25Q9H1X3 360 aa11.64□□□□□ -0.55
SATB1-204ENST00000417717 PTPRKQ15262 1439 aa11.64□□□□□ -0.55
SATB1-204ENST00000417717 TXNDC9O14530 226 aa11.64□□□□□ -0.55
SATB1-204ENST00000417717 CLTAP09496 248 aa11.64□□□□□ -0.55
SATB1-204ENST00000417717 CCDC96Q2M329 555 aa11.64□□□□□ -0.55
SATB1-204ENST00000417717 KANK3Q6NY19 840 aa11.64□□□□□ -0.55
SATB1-204ENST00000417717 XAB2Q9HCS7 855 aaKnown RBP11.64□□□□□ -0.55
SATB1-204ENST00000417717 ADGRL2O95490 1459 aa11.64□□□□□ -0.55
SATB1-204ENST00000417717 PRC1O43663 620 aa11.64□□□□□ -0.55
SATB1-204ENST00000417717 NBPF9Q3BBW0 867 aa11.64□□□□□ -0.55
SATB1-204ENST00000417717 CCDC63Q8NA47 563 aa11.64□□□□□ -0.55
SATB1-204ENST00000417717 RPGRIP1Q96KN7 1286 aa11.64□□□□□ -0.55
SATB1-204ENST00000417717 NPHP3Q7Z494 1330 aa11.64□□□□□ -0.55
SATB1-204ENST00000417717 GOLGA8KD6RF30 607 aa11.64□□□□□ -0.55
SATB1-204ENST00000417717 N4BP3O15049 544 aa11.64□□□□□ -0.55
SATB1-204ENST00000417717 VPS41P49754 854 aa11.64□□□□□ -0.55
SATB1-204ENST00000417717 TPD52P55327 224 aaPredicted RBP11.64□□□□□ -0.55
SATB1-204ENST00000417717 ISM2Q6H9L7 571 aa11.64□□□□□ -0.55
SATB1-204ENST00000417717 SPDL1Q96EA4 605 aa11.64□□□□□ -0.55
SATB1-204ENST00000417717 UBAC1Q9BSL1 405 aa11.64□□□□□ -0.55
SATB1-204ENST00000417717 MTRF1LQ9UGC7 380 aaKnown RBP11.64□□□□□ -0.55
SATB1-204ENST00000417717 ABCA8O94911 1581 aa11.63□□□□□ -0.55
SATB1-204ENST00000417717 DNMT1P26358 1616 aaKnown RBP11.63□□□□□ -0.55
SATB1-204ENST00000417717 SPECC1L-ADORA2AF8WAN1 911 aa11.63□□□□□ -0.55
SATB1-204ENST00000417717 ZWINTO95229 277 aa11.63□□□□□ -0.55
SATB1-204ENST00000417717 HNRNPCP07910 306 aaKnown RBP eCLIP11.63□□□□□ -0.55
SATB1-204ENST00000417717 GRAMD4Q6IC98 578 aa11.63□□□□□ -0.55
SATB1-204ENST00000417717 CAPRIN2Q6IMN6 1127 aaKnown RBP11.63□□□□□ -0.55
SATB1-204ENST00000417717 ZSCAN16Q9H4T2 348 aaPredicted RBP11.63□□□□□ -0.55
SATB1-204ENST00000417717 EVC2Q86UK5 1308 aa11.63□□□□□ -0.55
SATB1-204ENST00000417717 TLDC2A0PJX2 215 aa11.63□□□□□ -0.55
SATB1-204ENST00000417717 WASHC4Q2M389 1173 aa11.63□□□□□ -0.55
SATB1-204ENST00000417717 VPS52Q8N1B4 723 aa11.63□□□□□ -0.55
SATB1-204ENST00000417717 TCP11L2Q8N4U5 519 aa11.63□□□□□ -0.55
SATB1-204ENST00000417717 DONSONQ9NYP3 566 aa11.63□□□□□ -0.55
SATB1-204ENST00000417717 IMPACTQ9P2X3 320 aa11.63□□□□□ -0.55
SATB1-204ENST00000417717 UHRF1BP1LA0JNW5 1464 aa11.63□□□□□ -0.55
SATB1-204ENST00000417717 EIF3CLB5ME19 914 aaKnown RBP11.63□□□□□ -0.55
SATB1-204ENST00000417717 MAP3K21Q5TCX8 1036 aa11.63□□□□□ -0.55
SATB1-204ENST00000417717 SKAP1Q86WV1 359 aa11.63□□□□□ -0.55
SATB1-204ENST00000417717 EIF3CQ99613 913 aaKnown RBP11.63□□□□□ -0.55
SATB1-204ENST00000417717 NAPGQ99747 312 aaPredicted RBP11.63□□□□□ -0.55
SATB1-204ENST00000417717 DACT1Q9NYF0 836 aa11.63□□□□□ -0.55
SATB1-204ENST00000417717 BIN1O00499 593 aa11.62□□□□□ -0.55
SATB1-204ENST00000417717 DDX58O95786 925 aaKnown RBP11.62□□□□□ -0.55
SATB1-204ENST00000417717 SKIP12755 728 aa11.62□□□□□ -0.55
SATB1-204ENST00000417717 CCDC152Q4G0S7 254 aa11.62□□□□□ -0.55
SATB1-204ENST00000417717 SLC30A9Q6PML9 568 aa11.62□□□□□ -0.55
SATB1-204ENST00000417717 PPP1R21Q6ZMI0 780 aa11.62□□□□□ -0.55
SATB1-204ENST00000417717 AOPEPQ8N6M6 819 aa11.62□□□□□ -0.55
SATB1-204ENST00000417717 RABEP2Q9H5N1 569 aa11.62□□□□□ -0.55
SATB1-204ENST00000417717 DAAM1Q9Y4D1 1078 aa11.62□□□□□ -0.55
SATB1-204ENST00000417717 GNAI2P04899 355 aa11.62□□□□□ -0.55
SATB1-204ENST00000417717 FYB2Q5VWT5 728 aa11.62□□□□□ -0.55
SATB1-204ENST00000417717 C17orf53Q8N3J3 647 aaPredicted RBP11.62□□□□□ -0.55
SATB1-204ENST00000417717 DDX41Q9UJV9 622 aaKnown RBP11.62□□□□□ -0.55
SATB1-204ENST00000417717 RPRD2Q5VT52 1461 aaKnown RBP11.62□□□□□ -0.55
SATB1-204ENST00000417717 DIAPH1O60610 1272 aaKnown RBP11.62□□□□□ -0.55
SATB1-204ENST00000417717 GFAPP14136 432 aa11.62□□□□□ -0.55
SATB1-204ENST00000417717 CUL3Q13618 768 aa11.62□□□□□ -0.55
SATB1-204ENST00000417717 CCDC62Q6P9F0 684 aa11.62□□□□□ -0.55
SATB1-204ENST00000417717 YIPF3Q9GZM5 350 aa11.62□□□□□ -0.55
SATB1-204ENST00000417717 NOP53Q9NZM5 478 aaKnown RBP11.62□□□□□ -0.55
SATB1-204ENST00000417717 NOP2P46087 812 aaKnown RBP11.62□□□□□ -0.55
SATB1-204ENST00000417717 CCDC102BQ68D86 513 aa11.62□□□□□ -0.55
SATB1-204ENST00000417717 IFT81Q8WYA0 676 aa11.62□□□□□ -0.55
SATB1-204ENST00000417717 UTP14AQ9BVJ6 771 aaKnown RBP11.62□□□□□ -0.55
SATB1-204ENST00000417717 LZTFL1Q9NQ48 299 aa11.62□□□□□ -0.55
SATB1-204ENST00000417717 ATG3Q9NT62 314 aa11.62□□□□□ -0.55
SATB1-204ENST00000417717 SCAPERQ9BY12 1400 aa11.61□□□□□ -0.55
SATB1-204ENST00000417717 PRPHP41219 470 aa11.61□□□□□ -0.55
SATB1-204ENST00000417717 PRPF4BQ13523 1007 aaKnown RBP11.61□□□□□ -0.55
SATB1-204ENST00000417717 KARSQ15046 597 aaKnown RBP11.61□□□□□ -0.55
SATB1-204ENST00000417717 CYB5RLQ6IPT4 315 aa11.61□□□□□ -0.55
SATB1-204ENST00000417717 ARHGAP18Q8N392 663 aa11.61□□□□□ -0.55
SATB1-204ENST00000417717 TFIP11Q9UBB9 837 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms