RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 SLIT1O75093 1534 aa8.47□□□□□ -1.05
CSTF1-202ENST00000415828 SYCP2Q9BX26 1530 aa8.47□□□□□ -1.05
CSTF1-202ENST00000415828 TET3O43151 1660 aa8.46□□□□□ -1.05
CSTF1-202ENST00000415828 SHANK3Q9BYB0 1731 aa8.46□□□□□ -1.05
CSTF1-202ENST00000415828 NKTRP30414 1462 aaKnown RBP8.46□□□□□ -1.05
CSTF1-202ENST00000415828 EFSO43281 561 aa8.46□□□□□ -1.06
CSTF1-202ENST00000415828 SF3B2Q13435 895 aaKnown RBP8.46□□□□□ -1.06
CSTF1-202ENST00000415828 KLF15Q9UIH9 416 aa8.46□□□□□ -1.06
CSTF1-202ENST00000415828 MKL2Q9ULH7 1088 aa8.46□□□□□ -1.06
CSTF1-202ENST00000415828 PRR12Q9ULL5 1215 aa8.46□□□□□ -1.06
CSTF1-202ENST00000415828 PNPLA6Q8IY17 1366 aa8.46□□□□□ -1.06
CSTF1-202ENST00000415828 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.46□□□□□ -1.06
CSTF1-202ENST00000415828 SETD5Q9C0A6 1442 aa8.46□□□□□ -1.06
CSTF1-202ENST00000415828 PCBP4P57723 403 aaKnown RBP8.45□□□□□ -1.06
CSTF1-202ENST00000415828 ELOAQ14241 798 aaKnown RBP8.45□□□□□ -1.06
CSTF1-202ENST00000415828 TXNDC2Q86VQ3 553 aa8.45□□□□□ -1.06
CSTF1-202ENST00000415828 BTBD6Q96KE9 485 aa8.45□□□□□ -1.06
CSTF1-202ENST00000415828 CAMSAP2Q08AD1 1489 aa8.45□□□□□ -1.06
CSTF1-202ENST00000415828 NUP188Q5SRE5 1749 aa8.44□□□□□ -1.06
CSTF1-202ENST00000415828 C21orf2O43822 256 aa8.44□□□□□ -1.06
CSTF1-202ENST00000415828 PPP1R15AO75807 674 aaPredicted RBP8.44□□□□□ -1.06
CSTF1-202ENST00000415828 HOXB4P17483 251 aaPredicted RBP8.44□□□□□ -1.06
CSTF1-202ENST00000415828 ADH6P28332 368 aa8.44□□□□□ -1.06
CSTF1-202ENST00000415828 LAMC2Q13753 1193 aa8.44□□□□□ -1.06
CSTF1-202ENST00000415828 FCHSD1Q86WN1 690 aa8.44□□□□□ -1.06
CSTF1-202ENST00000415828 PHACTR1Q9C0D0 580 aa8.44□□□□□ -1.06
CSTF1-202ENST00000415828 GPC6Q9Y625 555 aaPredicted RBP8.44□□□□□ -1.06
CSTF1-202ENST00000415828 SPAG9O60271 1321 aaKnown RBP8.44□□□□□ -1.06
CSTF1-202ENST00000415828 ASXL1Q8IXJ9 1541 aa8.44□□□□□ -1.06
CSTF1-202ENST00000415828 GPATCH8Q9UKJ3 1502 aaKnown RBP8.44□□□□□ -1.06
CSTF1-202ENST00000415828 MYOM1P52179 1685 aa8.43□□□□□ -1.06
CSTF1-202ENST00000415828 HIRAP54198 1017 aaPredicted RBP8.43□□□□□ -1.06
CSTF1-202ENST00000415828 GRIN2CQ14957 1233 aa8.43□□□□□ -1.06
CSTF1-202ENST00000415828 PLA2G4EQ3MJ16 856 aa8.43□□□□□ -1.06
CSTF1-202ENST00000415828 TMEM164Q5U3C3 297 aa8.43□□□□□ -1.06
CSTF1-202ENST00000415828 ZNF468Q5VIY5 522 aaPredicted RBP8.43□□□□□ -1.06
CSTF1-202ENST00000415828 C1orf53Q5VUE5 145 aa8.43□□□□□ -1.06
CSTF1-202ENST00000415828 BRINP3Q76B58 766 aa8.43□□□□□ -1.06
CSTF1-202ENST00000415828 DDX17Q92841 729 aaKnown RBP8.43□□□□□ -1.06
CSTF1-202ENST00000415828 HSH2DQ96JZ2 352 aa8.43□□□□□ -1.06
CSTF1-202ENST00000415828 SLC26A8Q96RN1 970 aa8.43□□□□□ -1.06
CSTF1-202ENST00000415828 AVENQ9NQS1 362 aaPredicted RBP8.43□□□□□ -1.06
CSTF1-202ENST00000415828 ACIN1Q9UKV3 1341 aaKnown RBP8.43□□□□□ -1.06
CSTF1-202ENST00000415828 PIK3C2BO00750 1634 aa8.43□□□□□ -1.06
CSTF1-202ENST00000415828 MROH1Q8NDA8 1641 aa8.43□□□□□ -1.06
CSTF1-202ENST00000415828 PRMT3O60678 531 aa8.42□□□□□ -1.06
CSTF1-202ENST00000415828 RANGAP1P46060 587 aaPredicted RBP8.42□□□□□ -1.06
CSTF1-202ENST00000415828 SFSWAPQ12872 951 aaKnown RBP8.42□□□□□ -1.06
CSTF1-202ENST00000415828 LINC00114Q6XXX2 140 aa8.42□□□□□ -1.06
CSTF1-202ENST00000415828 PRIMPOLQ96LW4 560 aa8.42□□□□□ -1.06
CSTF1-202ENST00000415828 NINLQ9Y2I6 1382 aa8.42□□□□□ -1.06
CSTF1-202ENST00000415828 RREB1Q92766 1687 aa8.42□□□□□ -1.06
CSTF1-202ENST00000415828 CEP152O94986 1710 aa8.42□□□□□ -1.06
CSTF1-202ENST00000415828 IGHA1P01876 353 aa8.41□□□□□ -1.06
CSTF1-202ENST00000415828 IGFBP4P22692 258 aa8.41□□□□□ -1.06
CSTF1-202ENST00000415828 CHSY3Q70JA7 882 aa8.41□□□□□ -1.06
CSTF1-202ENST00000415828 ALDH16A1Q8IZ83 802 aa8.41□□□□□ -1.06
CSTF1-202ENST00000415828 ZNF280CQ8ND82 737 aa8.41□□□□□ -1.06
CSTF1-202ENST00000415828 VTI1AQ96AJ9 217 aa8.41□□□□□ -1.06
CSTF1-202ENST00000415828 NRKQ7Z2Y5 1582 aa8.4□□□□□ -1.06
CSTF1-202ENST00000415828 ITGB2P05107 769 aa8.4□□□□□ -1.06
CSTF1-202ENST00000415828 COL8A1P27658 744 aa8.4□□□□□ -1.06
CSTF1-202ENST00000415828 BAG6P46379 1132 aa8.4□□□□□ -1.06
CSTF1-202ENST00000415828 DGKGP49619 791 aa8.4□□□□□ -1.06
CSTF1-202ENST00000415828 SWI5Q1ZZU3 235 aa8.4□□□□□ -1.06
CSTF1-202ENST00000415828 SYT9Q86SS6 491 aa8.4□□□□□ -1.06
CSTF1-202ENST00000415828 SUSD3Q96L08 255 aa8.4□□□□□ -1.06
CSTF1-202ENST00000415828 CEP63Q96MT8 703 aa8.4□□□□□ -1.06
CSTF1-202ENST00000415828 C2orf49Q9BVC5 232 aaPredicted RBP8.4□□□□□ -1.06
CSTF1-202ENST00000415828 SUV39H2Q9H5I1 410 aa8.4□□□□□ -1.06
CSTF1-202ENST00000415828 ANKIB1Q9P2G1 1089 aa8.4□□□□□ -1.06
CSTF1-202ENST00000415828 PPP1R1BQ9UD71 204 aaPredicted RBP8.4□□□□□ -1.06
CSTF1-202ENST00000415828 MYO5BQ9ULV0 1848 aa8.4□□□□□ -1.07
CSTF1-202ENST00000415828 PRXQ9BXM0 1461 aa8.39□□□□□ -1.07
CSTF1-202ENST00000415828 HNRNPMP52272 730 aaKnown RBP eCLIP8.39□□□□□ -1.07
CSTF1-202ENST00000415828 SLC30A3Q99726 388 aa8.39□□□□□ -1.07
CSTF1-202ENST00000415828 BRD7Q9NPI1 651 aa8.39□□□□□ -1.07
CSTF1-202ENST00000415828 ERVK-7P63135 1459 aa8.38□□□□□ -1.07
CSTF1-202ENST00000415828 RALGAPBQ86X10 1494 aa8.38□□□□□ -1.07
CSTF1-202ENST00000415828 KRBA1A5PL33 1030 aa8.38□□□□□ -1.07
CSTF1-202ENST00000415828 GNB5O14775 395 aa8.38□□□□□ -1.07
CSTF1-202ENST00000415828 WEE1P30291 646 aa8.38□□□□□ -1.07
CSTF1-202ENST00000415828 RAB44Q7Z6P3 723 aaPredicted RBP8.38□□□□□ -1.07
CSTF1-202ENST00000415828 STAG2Q8N3U4 1231 aa8.38□□□□□ -1.07
CSTF1-202ENST00000415828 TROQ12816 1431 aaPredicted RBP8.37□□□□□ -1.07
CSTF1-202ENST00000415828 COL22A1Q8NFW1 1626 aaPredicted RBP8.37□□□□□ -1.07
CSTF1-202ENST00000415828 ELOA3CA0A087WX78 387 aaPredicted RBP8.37□□□□□ -1.07
CSTF1-202ENST00000415828 ELOA3DA6NLF2 546 aaPredicted RBP8.37□□□□□ -1.07
CSTF1-202ENST00000415828 MSTNO14793 375 aa8.37□□□□□ -1.07
CSTF1-202ENST00000415828 ELOA3BQ3SY89 546 aa8.37□□□□□ -1.07
CSTF1-202ENST00000415828 ELOA3Q8NG57 546 aa8.37□□□□□ -1.07
CSTF1-202ENST00000415828 LRRC59Q96AG4 307 aaKnown RBP8.37□□□□□ -1.07
CSTF1-202ENST00000415828 SPOCK3Q9BQ16 436 aa8.37□□□□□ -1.07
CSTF1-202ENST00000415828 WASHC2CQ9Y4E1 1318 aa8.36□□□□□ -1.07
CSTF1-202ENST00000415828 CARNS1A5YM72 827 aa8.36□□□□□ -1.07
CSTF1-202ENST00000415828 PIK3R2O00459 728 aa8.36□□□□□ -1.07
CSTF1-202ENST00000415828 FOXO3O43524 673 aa8.36□□□□□ -1.07
CSTF1-202ENST00000415828 TYRO3Q06418 890 aa8.36□□□□□ -1.07
CSTF1-202ENST00000415828 SPEM2Q0P670 501 aa8.36□□□□□ -1.07
CSTF1-202ENST00000415828 EZH2Q15910 746 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms