RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 FGFR2P21802 821 aa17.8■□□□□ 0.44
SGCE-202ENST00000415788 ATP2B3Q16720 1220 aa17.8■□□□□ 0.44
SGCE-202ENST00000415788 C15orf52Q6ZUT6 534 aaKnown RBP17.8■□□□□ 0.44
SGCE-202ENST00000415788 CLASRPQ8N2M8 674 aaKnown RBP17.8■□□□□ 0.44
SGCE-202ENST00000415788 APBB1O00213 710 aa17.79■□□□□ 0.44
SGCE-202ENST00000415788 NFKBIEO00221 500 aa17.79■□□□□ 0.44
SGCE-202ENST00000415788 ARHGAP27Q6ZUM4 889 aa17.79■□□□□ 0.44
SGCE-202ENST00000415788 MED23Q9ULK4 1368 aa17.79■□□□□ 0.44
SGCE-202ENST00000415788 DUOX1Q9NRD9 1551 aa17.79■□□□□ 0.44
SGCE-202ENST00000415788 TNNI3KQ59H18 835 aa17.78■□□□□ 0.44
SGCE-202ENST00000415788 FPGT-TNNI3KV9GXZ4 949 aa17.78■□□□□ 0.44
SGCE-202ENST00000415788 ZNF609O15014 1411 aa17.78■□□□□ 0.44
SGCE-202ENST00000415788 A0A1B0GUL7 405 aa17.78■□□□□ 0.44
SGCE-202ENST00000415788 WASHC4Q2M389 1173 aa17.78■□□□□ 0.44
SGCE-202ENST00000415788 ZC3H12CQ9C0D7 883 aaKnown RBP17.78■□□□□ 0.44
SGCE-202ENST00000415788 KIAA2012Q0VF49 1180 aa17.77■□□□□ 0.43
SGCE-202ENST00000415788 ANKRD45Q5TZF3 282 aa17.76■□□□□ 0.43
SGCE-202ENST00000415788 IL1RAPL2Q9NP60 686 aa17.76■□□□□ 0.43
SGCE-202ENST00000415788 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.76■□□□□ 0.43
SGCE-202ENST00000415788 FER1L6Q2WGJ9 1857 aa17.76■□□□□ 0.43
SGCE-202ENST00000415788 A0A1B0GUL6 1792 aa17.76■□□□□ 0.43
SGCE-202ENST00000415788 SNAP23O00161 211 aa17.75■□□□□ 0.43
SGCE-202ENST00000415788 IARSP41252 1262 aaKnown RBP17.75■□□□□ 0.43
SGCE-202ENST00000415788 CAVIN4Q5BKX8 364 aa17.75■□□□□ 0.43
SGCE-202ENST00000415788 PPIP5K2O43314 1243 aa17.75■□□□□ 0.43
SGCE-202ENST00000415788 TIMM10P62072 90 aa17.75■□□□□ 0.43
SGCE-202ENST00000415788 AACSQ86V21 672 aa17.75■□□□□ 0.43
SGCE-202ENST00000415788 EAF2Q96CJ1 260 aaPredicted RBP17.75■□□□□ 0.43
SGCE-202ENST00000415788 NEUROD6Q96NK8 337 aa17.75■□□□□ 0.43
SGCE-202ENST00000415788 ZNF277Q9NRM2 450 aaPredicted RBP17.75■□□□□ 0.43
SGCE-202ENST00000415788 IRS2Q9Y4H2 1338 aa17.75■□□□□ 0.43
SGCE-202ENST00000415788 WTIPA6NIX2 430 aaPredicted RBP17.74■□□□□ 0.43
SGCE-202ENST00000415788 IFIT2P09913 472 aaKnown RBP17.74■□□□□ 0.43
SGCE-202ENST00000415788 NUCB1Q02818 461 aa17.74■□□□□ 0.43
SGCE-202ENST00000415788 RASSF7Q02833 373 aa17.74■□□□□ 0.43
SGCE-202ENST00000415788 ZNF804AQ7Z570 1209 aa17.74■□□□□ 0.43
SGCE-202ENST00000415788 SRCAPQ6ZRS2 3230 aa17.74■□□□□ 0.43
SGCE-202ENST00000415788 SMARCA5O60264 1052 aaPredicted RBP17.73■□□□□ 0.43
SGCE-202ENST00000415788 LMNB1P20700 586 aa17.73■□□□□ 0.43
SGCE-202ENST00000415788 LARGE2Q8N3Y3 721 aa17.73■□□□□ 0.43
SGCE-202ENST00000415788 XAGE2Q96GT9 111 aa17.73■□□□□ 0.43
SGCE-202ENST00000415788 COA1Q9GZY4 146 aa17.73■□□□□ 0.43
SGCE-202ENST00000415788 KLRK1P26718 216 aa17.73■□□□□ 0.43
SGCE-202ENST00000415788 AOC3Q16853 763 aa17.73■□□□□ 0.43
SGCE-202ENST00000415788 CHD1LQ86WJ1 897 aa17.73■□□□□ 0.43
SGCE-202ENST00000415788 VPS37DQ86XT2 251 aa17.73■□□□□ 0.43
SGCE-202ENST00000415788 GPR101Q96P66 508 aaPredicted RBP17.73■□□□□ 0.43
SGCE-202ENST00000415788 G3V3G9 751 aa17.72■□□□□ 0.43
SGCE-202ENST00000415788 RIMBP2O15034 1052 aa17.72■□□□□ 0.43
SGCE-202ENST00000415788 HIBADHP31937 336 aaKnown RBP17.72■□□□□ 0.43
SGCE-202ENST00000415788 GORABQ5T7V8 394 aa17.72■□□□□ 0.43
SGCE-202ENST00000415788 DCAF8Q5TAQ9 597 aa17.72■□□□□ 0.43
SGCE-202ENST00000415788 FBXO33Q7Z6M2 555 aa17.72■□□□□ 0.43
SGCE-202ENST00000415788 TXNRD3Q86VQ6 643 aa17.72■□□□□ 0.43
SGCE-202ENST00000415788 JDP2Q8WYK2 163 aa17.72■□□□□ 0.43
SGCE-202ENST00000415788 FAM84BQ96KN1 310 aaPredicted RBP17.72■□□□□ 0.43
SGCE-202ENST00000415788 ZBTB22O15209 634 aa17.71■□□□□ 0.43
SGCE-202ENST00000415788 C8orf34Q49A92 452 aa17.71■□□□□ 0.43
SGCE-202ENST00000415788 RTN4Q9NQC3 1192 aaKnown RBP17.71■□□□□ 0.43
SGCE-202ENST00000415788 GNL3LQ9NVN8 582 aaKnown RBP17.71■□□□□ 0.43
SGCE-202ENST00000415788 DBNLQ9UJU6 430 aaKnown RBP17.71■□□□□ 0.43
SGCE-202ENST00000415788 ADORA1P30542 326 aa17.71■□□□□ 0.43
SGCE-202ENST00000415788 GYG1P46976 350 aa17.71■□□□□ 0.43
SGCE-202ENST00000415788 CCDC158Q5M9N0 1113 aa17.71■□□□□ 0.43
SGCE-202ENST00000415788 PODNQ7Z5L7 613 aa17.71■□□□□ 0.43
SGCE-202ENST00000415788 NIM1KQ8IY84 436 aa17.71■□□□□ 0.43
SGCE-202ENST00000415788 DBNDD2Q9BQY9 259 aa17.71■□□□□ 0.43
SGCE-202ENST00000415788 LNPKQ9C0E8 428 aa17.71■□□□□ 0.43
SGCE-202ENST00000415788 CCDC8Q9H0W5 538 aaPredicted RBP17.71■□□□□ 0.43
SGCE-202ENST00000415788 CCDC102BQ68D86 513 aa17.7■□□□□ 0.42
SGCE-202ENST00000415788 GPATCH3Q96I76 525 aa17.7■□□□□ 0.42
SGCE-202ENST00000415788 BCAMP50895 628 aa17.69■□□□□ 0.42
SGCE-202ENST00000415788 CD209Q9NNX6 404 aa17.69■□□□□ 0.42
SGCE-202ENST00000415788 ARAP2Q8WZ64 1704 aa17.69■□□□□ 0.42
SGCE-202ENST00000415788 SEMA3EO15041 775 aa17.69■□□□□ 0.42
SGCE-202ENST00000415788 UQCRFS1P1P0C7P4 283 aa17.69■□□□□ 0.42
SGCE-202ENST00000415788 IL1R1P14778 569 aa17.69■□□□□ 0.42
SGCE-202ENST00000415788 PRELPP51888 382 aa17.69■□□□□ 0.42
SGCE-202ENST00000415788 ZNF512BQ96KM6 892 aaPredicted RBP17.69■□□□□ 0.42
SGCE-202ENST00000415788 TLR7Q9NYK1 1049 aaKnown RBP17.69■□□□□ 0.42
SGCE-202ENST00000415788 ECE2O60344 883 aa17.68■□□□□ 0.42
SGCE-202ENST00000415788 DOK7Q18PE1 504 aa17.68■□□□□ 0.42
SGCE-202ENST00000415788 TTC39AQ5SRH9 613 aa17.68■□□□□ 0.42
SGCE-202ENST00000415788 DBNDD1Q9H9R9 158 aa17.68■□□□□ 0.42
SGCE-202ENST00000415788 ZNRF3Q9ULT6 936 aa17.68■□□□□ 0.42
SGCE-202ENST00000415788 ZC3H4Q9UPT8 1303 aaKnown RBP17.67■□□□□ 0.42
SGCE-202ENST00000415788 ARID4AP29374 1257 aaPredicted RBP17.67■□□□□ 0.42
SGCE-202ENST00000415788 PHKA1P46020 1223 aa17.67■□□□□ 0.42
SGCE-202ENST00000415788 TDRD7Q8NHU6 1098 aaKnown RBP17.67■□□□□ 0.42
SGCE-202ENST00000415788 RNF181Q9P0P0 153 aa17.67■□□□□ 0.42
SGCE-202ENST00000415788 TTC41PQ6P2S7 1318 aa17.67■□□□□ 0.42
SGCE-202ENST00000415788 C9orf131Q5VYM1 1079 aa17.67■□□□□ 0.42
SGCE-202ENST00000415788 ECHDC1Q9NTX5 307 aa17.67■□□□□ 0.42
SGCE-202ENST00000415788 FRAT2O75474 233 aaPredicted RBP17.66■□□□□ 0.42
SGCE-202ENST00000415788 MX1P20591 662 aa17.66■□□□□ 0.42
SGCE-202ENST00000415788 BRPF3Q9ULD4 1205 aa17.66■□□□□ 0.42
SGCE-202ENST00000415788 DENND2AQ9ULE3 1009 aa17.66■□□□□ 0.42
SGCE-202ENST00000415788 PDS5AQ29RF7 1337 aaKnown RBP17.65■□□□□ 0.42
SGCE-202ENST00000415788 SALL3Q9BXA9 1300 aa17.65■□□□□ 0.42
SGCE-202ENST00000415788 FZD9O00144 591 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms