RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 KRT27Q7Z3Y8 459 aa8.1□□□□□ -1.11
HDAC8-211ENST00000415409 AACSQ86V21 672 aa8.1□□□□□ -1.11
HDAC8-211ENST00000415409 ZNF34Q8IZ26 560 aa8.1□□□□□ -1.11
HDAC8-211ENST00000415409 LINC00116Q8NCU8 138 aa8.1□□□□□ -1.11
HDAC8-211ENST00000415409 FAM89AQ96GI7 184 aa8.1□□□□□ -1.11
HDAC8-211ENST00000415409 AK7Q96M32 723 aa8.1□□□□□ -1.11
HDAC8-211ENST00000415409 PLA2G12BQ9BX93 195 aa8.1□□□□□ -1.11
HDAC8-211ENST00000415409 C22orf23Q9BZE7 217 aa8.1□□□□□ -1.11
HDAC8-211ENST00000415409 IRX2Q9BZI1 471 aaPredicted RBP8.1□□□□□ -1.11
HDAC8-211ENST00000415409 CCNL1Q9UK58 526 aaPredicted RBP8.1□□□□□ -1.11
HDAC8-211ENST00000415409 UBR2Q8IWV8 1755 aa8.1□□□□□ -1.11
HDAC8-211ENST00000415409 IRS4O14654 1257 aaPredicted RBP8.09□□□□□ -1.11
HDAC8-211ENST00000415409 SASH1O94885 1247 aa8.09□□□□□ -1.11
HDAC8-211ENST00000415409 CAMTA2O94983 1202 aa8.09□□□□□ -1.11
HDAC8-211ENST00000415409 ITGBL1O95965 494 aaPredicted RBP8.09□□□□□ -1.11
HDAC8-211ENST00000415409 IL15P40933 162 aaPredicted RBP8.09□□□□□ -1.11
HDAC8-211ENST00000415409 BECN1Q14457 450 aa8.09□□□□□ -1.11
HDAC8-211ENST00000415409 TAF7LQ5H9L4 462 aa8.09□□□□□ -1.11
HDAC8-211ENST00000415409 FAM182BQ5T319 152 aa8.09□□□□□ -1.11
HDAC8-211ENST00000415409 TSHZ3Q63HK5 1081 aa8.09□□□□□ -1.11
HDAC8-211ENST00000415409 CLEC4GQ6UXB4 293 aa8.09□□□□□ -1.11
HDAC8-211ENST00000415409 HOMEZQ8IX15 550 aa8.09□□□□□ -1.11
HDAC8-211ENST00000415409 CNTROBQ8N137 903 aa8.09□□□□□ -1.11
HDAC8-211ENST00000415409 RILPL2Q969X0 211 aa8.09□□□□□ -1.11
HDAC8-211ENST00000415409 UTP14AQ9BVJ6 771 aaKnown RBP8.09□□□□□ -1.11
HDAC8-211ENST00000415409 ECHDC1Q9NTX5 307 aa8.09□□□□□ -1.11
HDAC8-211ENST00000415409 TSR3Q9UJK0 312 aaKnown RBP8.09□□□□□ -1.11
HDAC8-211ENST00000415409 LRP5O75197 1615 aa8.09□□□□□ -1.11
HDAC8-211ENST00000415409 LAMB4A4D0S4 1761 aa8.09□□□□□ -1.11
HDAC8-211ENST00000415409 CACNA1FO60840 1977 aa8.08□□□□□ -1.12
HDAC8-211ENST00000415409 PDE8AO60658 829 aa8.08□□□□□ -1.12
HDAC8-211ENST00000415409 RPS6KA4O75676 772 aa8.08□□□□□ -1.12
HDAC8-211ENST00000415409 CIAO1O76071 339 aa8.08□□□□□ -1.12
HDAC8-211ENST00000415409 REC8O95072 547 aa8.08□□□□□ -1.12
HDAC8-211ENST00000415409 CSF1RP07333 972 aa8.08□□□□□ -1.12
HDAC8-211ENST00000415409 KCNC4Q03721 635 aa8.08□□□□□ -1.12
HDAC8-211ENST00000415409 TFCP2Q12800 502 aa8.08□□□□□ -1.12
HDAC8-211ENST00000415409 IFIT5Q13325 482 aaKnown RBP8.08□□□□□ -1.12
HDAC8-211ENST00000415409 KLHDC4Q8TBB5 520 aa8.08□□□□□ -1.12
HDAC8-211ENST00000415409 GPR108Q9NPR9 543 aa8.08□□□□□ -1.12
HDAC8-211ENST00000415409 TSKSQ9UJT2 592 aa8.08□□□□□ -1.12
HDAC8-211ENST00000415409 SH3TC1Q8TE82 1336 aa8.07□□□□□ -1.12
HDAC8-211ENST00000415409 ANKRD18BA2A2Z9 1011 aa8.07□□□□□ -1.12
HDAC8-211ENST00000415409 EYA2O00167 538 aa8.07□□□□□ -1.12
HDAC8-211ENST00000415409 GNPATO15228 680 aa8.07□□□□□ -1.12
HDAC8-211ENST00000415409 ZPR1O75312 459 aa8.07□□□□□ -1.12
HDAC8-211ENST00000415409 RBM25P49756 843 aaKnown RBP8.07□□□□□ -1.12
HDAC8-211ENST00000415409 CTSWP56202 376 aa8.07□□□□□ -1.12
HDAC8-211ENST00000415409 SF3B2Q13435 895 aaKnown RBP8.07□□□□□ -1.12
HDAC8-211ENST00000415409 TNNI3KQ59H18 835 aa8.07□□□□□ -1.12
HDAC8-211ENST00000415409 PTF1AQ7RTS3 328 aa8.07□□□□□ -1.12
HDAC8-211ENST00000415409 PI4K2BQ8TCG2 481 aa8.07□□□□□ -1.12
HDAC8-211ENST00000415409 EAF2Q96CJ1 260 aaPredicted RBP8.07□□□□□ -1.12
HDAC8-211ENST00000415409 CCDC8Q9H0W5 538 aaPredicted RBP8.07□□□□□ -1.12
HDAC8-211ENST00000415409 CEP126Q9P2H0 1117 aa8.07□□□□□ -1.12
HDAC8-211ENST00000415409 NIP7Q9Y221 180 aaKnown RBP eCLIP8.07□□□□□ -1.12
HDAC8-211ENST00000415409 AKAP2Q9Y2D5 859 aa8.07□□□□□ -1.12
HDAC8-211ENST00000415409 RTCBQ9Y3I0 505 aaKnown RBP8.07□□□□□ -1.12
HDAC8-211ENST00000415409 FPGT-TNNI3KV9GXZ4 949 aa8.07□□□□□ -1.12
HDAC8-211ENST00000415409 WNK3Q9BYP7 1800 aa8.07□□□□□ -1.12
HDAC8-211ENST00000415409 THSD7AQ9UPZ6 1657 aa8.07□□□□□ -1.12
HDAC8-211ENST00000415409 N4BP2Q86UW6 1770 aaPredicted RBP8.07□□□□□ -1.12
HDAC8-211ENST00000415409 UBN2Q6ZU65 1347 aa8.06□□□□□ -1.12
HDAC8-211ENST00000415409 CHMLP26374 656 aa8.06□□□□□ -1.12
HDAC8-211ENST00000415409 KCNQ4P56696 695 aa8.06□□□□□ -1.12
HDAC8-211ENST00000415409 PPP4CP60510 307 aa8.06□□□□□ -1.12
HDAC8-211ENST00000415409 SLC27A3Q5K4L6 730 aa8.06□□□□□ -1.12
HDAC8-211ENST00000415409 SUSD4Q5VX71 490 aa8.06□□□□□ -1.12
HDAC8-211ENST00000415409 ATG9AQ7Z3C6 839 aa8.06□□□□□ -1.12
HDAC8-211ENST00000415409 TTLL11Q8NHH1 800 aa8.06□□□□□ -1.12
HDAC8-211ENST00000415409 EVI5LQ96CN4 794 aa8.06□□□□□ -1.12
HDAC8-211ENST00000415409 NARFQ9UHQ1 456 aa8.06□□□□□ -1.12
HDAC8-211ENST00000415409 DOT1LQ8TEK3 1739 aa8.06□□□□□ -1.12
HDAC8-211ENST00000415409 TNS1Q9HBL0 1735 aaKnown RBP8.06□□□□□ -1.12
HDAC8-211ENST00000415409 FAM177BA6PVY3 158 aa8.05□□□□□ -1.12
HDAC8-211ENST00000415409 SMAPO00193 183 aa8.05□□□□□ -1.12
HDAC8-211ENST00000415409 HIP1O00291 1037 aa8.05□□□□□ -1.12
HDAC8-211ENST00000415409 MAP4K4O95819 1239 aaPredicted RBP8.05□□□□□ -1.12
HDAC8-211ENST00000415409 ITGA6P23229 1130 aa8.05□□□□□ -1.12
HDAC8-211ENST00000415409 MCCP23508 829 aa8.05□□□□□ -1.12
HDAC8-211ENST00000415409 PRSS12P56730 875 aa8.05□□□□□ -1.12
HDAC8-211ENST00000415409 CCDC152Q4G0S7 254 aa8.05□□□□□ -1.12
HDAC8-211ENST00000415409 TRAPPC3LQ5T215 181 aa8.05□□□□□ -1.12
HDAC8-211ENST00000415409 SYNE4Q8N205 404 aa8.05□□□□□ -1.12
HDAC8-211ENST00000415409 RUFY2Q8WXA3 655 aa8.05□□□□□ -1.12
HDAC8-211ENST00000415409 ZNF594Q96JF6 807 aaPredicted RBP8.05□□□□□ -1.12
HDAC8-211ENST00000415409 CCDC85AQ96PX6 553 aaPredicted RBP8.05□□□□□ -1.12
HDAC8-211ENST00000415409 ESYT1Q9BSJ8 1104 aa8.05□□□□□ -1.12
HDAC8-211ENST00000415409 NYXQ9GZU5 481 aa8.05□□□□□ -1.12
HDAC8-211ENST00000415409 SBF2Q86WG5 1849 aa8.05□□□□□ -1.12
HDAC8-211ENST00000415409 VIRMAQ69YN4 1812 aaKnown RBP8.04□□□□□ -1.12
HDAC8-211ENST00000415409 EPB41L2O43491 1005 aaKnown RBP8.04□□□□□ -1.12
HDAC8-211ENST00000415409 RNF40O75150 1001 aa8.04□□□□□ -1.12
HDAC8-211ENST00000415409 TRIM37O94972 964 aa8.04□□□□□ -1.12
HDAC8-211ENST00000415409 NTSR2O95665 410 aa8.04□□□□□ -1.12
HDAC8-211ENST00000415409 HCLS1P14317 486 aaPredicted RBP8.04□□□□□ -1.12
HDAC8-211ENST00000415409 ATP5JP18859 108 aa8.04□□□□□ -1.12
HDAC8-211ENST00000415409 GTF2E1P29083 439 aaPredicted RBP8.04□□□□□ -1.12
HDAC8-211ENST00000415409 RFC4P35249 363 aa8.04□□□□□ -1.12
HDAC8-211ENST00000415409 LRRC24Q50LG9 513 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms