RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 CCNL1Q9UK58 526 aaPredicted RBP23.96■■□□□ 1.43
AP1S3-205ENST00000415298 FBXO38Q6PIJ6 1188 aa23.95■■□□□ 1.43
AP1S3-205ENST00000415298 SMIM5Q71RC9 77 aa23.95■■□□□ 1.43
AP1S3-205ENST00000415298 TBC1D22AQ8WUA7 517 aa23.95■■□□□ 1.43
AP1S3-205ENST00000415298 API5Q9BZZ5 524 aaKnown RBP23.95■■□□□ 1.43
AP1S3-205ENST00000415298 MBD3O95983 291 aa23.95■■□□□ 1.42
AP1S3-205ENST00000415298 CYP2E1P05181 493 aaPredicted RBP23.95■■□□□ 1.42
AP1S3-205ENST00000415298 ZNF513Q8N8E2 541 aaPredicted RBP23.95■■□□□ 1.42
AP1S3-205ENST00000415298 FBXO18Q8NFZ0 1043 aa23.95■■□□□ 1.42
AP1S3-205ENST00000415298 APBA3O96018 575 aa23.94■■□□□ 1.42
AP1S3-205ENST00000415298 CRKLP46109 303 aaKnown RBP23.94■■□□□ 1.42
AP1S3-205ENST00000415298 INTS5Q6P9B9 1019 aaKnown RBP23.94■■□□□ 1.42
AP1S3-205ENST00000415298 TTLL7Q6ZT98 887 aa23.94■■□□□ 1.42
AP1S3-205ENST00000415298 USP25Q9UHP3 1055 aa23.94■■□□□ 1.42
AP1S3-205ENST00000415298 MYH14Q7Z406 1995 aaKnown RBP23.94■■□□□ 1.42
AP1S3-205ENST00000415298 ITPRIPQ8IWB1 547 aa23.94■■□□□ 1.42
AP1S3-205ENST00000415298 PROM2Q8N271 834 aa23.94■■□□□ 1.42
AP1S3-205ENST00000415298 ABCC4O15439 1325 aa23.94■■□□□ 1.42
AP1S3-205ENST00000415298 H0YHG0 523 aa23.93■■□□□ 1.42
AP1S3-205ENST00000415298 TPM4P67936 248 aa23.93■■□□□ 1.42
AP1S3-205ENST00000415298 SARNPP82979 210 aaKnown RBP23.93■■□□□ 1.42
AP1S3-205ENST00000415298 CASC1Q6TDU7 716 aa23.93■■□□□ 1.42
AP1S3-205ENST00000415298 GOLGA5Q8TBA6 731 aa23.93■■□□□ 1.42
AP1S3-205ENST00000415298 ZC3H12AQ5D1E8 599 aaKnown RBP23.93■■□□□ 1.42
AP1S3-205ENST00000415298 NBPF3Q9H094 633 aa23.93■■□□□ 1.42
AP1S3-205ENST00000415298 FAM210AQ96ND0 272 aa23.92■■□□□ 1.42
AP1S3-205ENST00000415298 KIF2CQ99661 725 aa23.92■■□□□ 1.42
AP1S3-205ENST00000415298 KCNF1Q9H3M0 494 aa23.92■■□□□ 1.42
AP1S3-205ENST00000415298 ADCY9O60503 1353 aa23.92■■□□□ 1.42
AP1S3-205ENST00000415298 MAFGO15525 162 aa23.91■■□□□ 1.42
AP1S3-205ENST00000415298 MVPQ14764 893 aaKnown RBP23.91■■□□□ 1.42
AP1S3-205ENST00000415298 MAP3K2Q9Y2U5 619 aa23.91■■□□□ 1.42
AP1S3-205ENST00000415298 AK9Q5TCS8 1911 aa23.91■■□□□ 1.42
AP1S3-205ENST00000415298 CD2BP2O95400 341 aaKnown RBP23.9■■□□□ 1.42
AP1S3-205ENST00000415298 MMS22LQ6ZRQ5 1243 aa23.9■■□□□ 1.42
AP1S3-205ENST00000415298 GTF3C6Q969F1 213 aa23.9■■□□□ 1.42
AP1S3-205ENST00000415298 LY75O60449 1722 aa23.9■■□□□ 1.42
AP1S3-205ENST00000415298 PPM1EQ8WY54 764 aa23.9■■□□□ 1.42
AP1S3-205ENST00000415298 CCDC87Q9NVE4 849 aa23.9■■□□□ 1.42
AP1S3-205ENST00000415298 KSR2Q6VAB6 950 aa23.89■■□□□ 1.42
AP1S3-205ENST00000415298 ANKRD13DQ6ZTN6 518 aa23.89■■□□□ 1.42
AP1S3-205ENST00000415298 IQUBQ8NA54 791 aa23.89■■□□□ 1.41
AP1S3-205ENST00000415298 RIC3Q7Z5B4 369 aa23.88■■□□□ 1.41
AP1S3-205ENST00000415298 DNAAF4Q8WXU2 420 aa23.88■■□□□ 1.41
AP1S3-205ENST00000415298 AMIGO3Q86WK7 504 aa23.88■■□□□ 1.41
AP1S3-205ENST00000415298 ZBTB3Q9H5J0 574 aa23.88■■□□□ 1.41
AP1S3-205ENST00000415298 TXNRD1Q16881 649 aa23.87■■□□□ 1.41
AP1S3-205ENST00000415298 V9GYY5 206 aaPredicted RBP23.87■■□□□ 1.41
AP1S3-205ENST00000415298 INTS3Q68E01 1043 aaKnown RBP23.87■■□□□ 1.41
AP1S3-205ENST00000415298 SYAP1Q96A49 352 aaPredicted RBP23.87■■□□□ 1.41
AP1S3-205ENST00000415298 TBC1D2BQ9UPU7 963 aa23.87■■□□□ 1.41
AP1S3-205ENST00000415298 FHOD1Q9Y613 1164 aa23.87■■□□□ 1.41
AP1S3-205ENST00000415298 COL5A3P25940 1745 aaPredicted RBP23.86■■□□□ 1.41
AP1S3-205ENST00000415298 SMARCE1Q969G3 411 aa23.86■■□□□ 1.41
AP1S3-205ENST00000415298 RWDD1Q9H446 243 aaPredicted RBP23.86■■□□□ 1.41
AP1S3-205ENST00000415298 RNF20Q5VTR2 975 aa23.86■■□□□ 1.41
AP1S3-205ENST00000415298 NSFL1CQ9UNZ2 370 aaKnown RBP23.86■■□□□ 1.41
AP1S3-205ENST00000415298 ZBTB7BO15156 539 aaPredicted RBP23.85■■□□□ 1.41
AP1S3-205ENST00000415298 PLSCR1O15162 318 aa23.85■■□□□ 1.41
AP1S3-205ENST00000415298 DDX58O95786 925 aaKnown RBP23.85■■□□□ 1.41
AP1S3-205ENST00000415298 EIF5P55010 431 aaKnown RBP23.85■■□□□ 1.41
AP1S3-205ENST00000415298 CWF19L2Q2TBE0 894 aaKnown RBP23.85■■□□□ 1.41
AP1S3-205ENST00000415298 IL6STP40189 918 aaPredicted RBP23.84■■□□□ 1.41
AP1S3-205ENST00000415298 PLA2G4AP47712 749 aa23.84■■□□□ 1.41
AP1S3-205ENST00000415298 INHBEP58166 350 aa23.84■■□□□ 1.41
AP1S3-205ENST00000415298 BEND3Q5T5X7 828 aa23.84■■□□□ 1.41
AP1S3-205ENST00000415298 CTAGE5O15320 804 aa23.84■■□□□ 1.41
AP1S3-205ENST00000415298 ANKRD33BA6NCL7 494 aa23.83■■□□□ 1.41
AP1S3-205ENST00000415298 EN1Q05925 392 aaPredicted RBP23.83■■□□□ 1.41
AP1S3-205ENST00000415298 TAF1LQ8IZX4 1826 aa23.83■■□□□ 1.41
AP1S3-205ENST00000415298 ZNF831Q5JPB2 1677 aa23.83■■□□□ 1.41
AP1S3-205ENST00000415298 ST5P78524 1137 aa23.83■■□□□ 1.41
AP1S3-205ENST00000415298 PLBD2Q8NHP8 589 aa23.83■■□□□ 1.41
AP1S3-205ENST00000415298 ERO1AQ96HE7 468 aa23.83■■□□□ 1.41
AP1S3-205ENST00000415298 DDX19BQ9UMR2 479 aa23.83■■□□□ 1.41
AP1S3-205ENST00000415298 PCDHB15Q9Y5E8 787 aa23.83■■□□□ 1.41
AP1S3-205ENST00000415298 ATP5J2-PTCD1G3V325 749 aa23.82■■□□□ 1.4
AP1S3-205ENST00000415298 HLFQ16534 295 aa23.82■■□□□ 1.4
AP1S3-205ENST00000415298 C16orf45Q96MC5 204 aaPredicted RBP23.82■■□□□ 1.4
AP1S3-205ENST00000415298 MYD88Q99836 296 aa23.82■■□□□ 1.4
AP1S3-205ENST00000415298 TNS1Q9HBL0 1735 aaKnown RBP23.82■■□□□ 1.4
AP1S3-205ENST00000415298 CICQ96RK0 1608 aaPredicted RBP23.82■■□□□ 1.4
AP1S3-205ENST00000415298 GNPATO15228 680 aa23.82■■□□□ 1.4
AP1S3-205ENST00000415298 MEIS3Q99687 375 aa23.82■■□□□ 1.4
AP1S3-205ENST00000415298 C1orf115Q9H7X2 142 aa23.82■■□□□ 1.4
AP1S3-205ENST00000415298 CPP00450 1065 aa23.81■■□□□ 1.4
AP1S3-205ENST00000415298 IGKV5-2P06315 115 aa23.81■■□□□ 1.4
AP1S3-205ENST00000415298 IPO7O95373 1038 aaKnown RBP23.81■■□□□ 1.4
AP1S3-205ENST00000415298 CCT4P50991 539 aaKnown RBP23.81■■□□□ 1.4
AP1S3-205ENST00000415298 EZH2Q15910 746 aaKnown RBP23.81■■□□□ 1.4
AP1S3-205ENST00000415298 DEFB132Q7Z7B7 95 aa23.81■■□□□ 1.4
AP1S3-205ENST00000415298 DZIP3Q86Y13 1208 aaKnown RBP23.81■■□□□ 1.4
AP1S3-205ENST00000415298 ZNF215Q9UL58 517 aaPredicted RBP23.81■■□□□ 1.4
AP1S3-205ENST00000415298 CNTNAP4Q9C0A0 1308 aa23.8■■□□□ 1.4
AP1S3-205ENST00000415298 KDM4AO75164 1064 aa23.8■■□□□ 1.4
AP1S3-205ENST00000415298 PNMA6AP0CW24 399 aaPredicted RBP23.8■■□□□ 1.4
AP1S3-205ENST00000415298 SLC27A3Q5K4L6 730 aa23.8■■□□□ 1.4
AP1S3-205ENST00000415298 PAIP2Q9BPZ3 127 aaKnown RBP23.8■■□□□ 1.4
AP1S3-205ENST00000415298 METTL22Q9BUU2 404 aaPredicted RBP23.8■■□□□ 1.4
AP1S3-205ENST00000415298 SRCIN1Q9C0H9 1055 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms