RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 TBC1D10BQ4KMP7 808 aaPredicted RBP21.24■□□□□ 0.99
SCAMP4-204ENST00000414057 RSBN1LQ6PCB5 846 aaPredicted RBP21.24■□□□□ 0.99
SCAMP4-204ENST00000414057 DCPSQ96C86 337 aaKnown RBP21.24■□□□□ 0.99
SCAMP4-204ENST00000414057 PCNTO95613 3336 aa21.24■□□□□ 0.99
SCAMP4-204ENST00000414057 USP17L3A6NCW0 530 aa21.23■□□□□ 0.99
SCAMP4-204ENST00000414057 USP17L4A6NCW7 530 aa21.23■□□□□ 0.99
SCAMP4-204ENST00000414057 MAP2K1Q02750 393 aaPredicted RBP21.23■□□□□ 0.99
SCAMP4-204ENST00000414057 RBM26Q5T8P6 1007 aaKnown RBP21.23■□□□□ 0.99
SCAMP4-204ENST00000414057 USP17L1Q7RTZ2 530 aa21.23■□□□□ 0.99
SCAMP4-204ENST00000414057 MRPL50Q8N5N7 158 aaKnown RBP21.23■□□□□ 0.99
SCAMP4-204ENST00000414057 MYH3P11055 1940 aa21.22■□□□□ 0.99
SCAMP4-204ENST00000414057 ZNF609O15014 1411 aa21.22■□□□□ 0.99
SCAMP4-204ENST00000414057 GRM8O00222 908 aa21.22■□□□□ 0.99
SCAMP4-204ENST00000414057 ALDH1L1O75891 902 aa21.22■□□□□ 0.99
SCAMP4-204ENST00000414057 IFIT5Q13325 482 aaKnown RBP21.22■□□□□ 0.99
SCAMP4-204ENST00000414057 AAMPQ13685 434 aa21.22■□□□□ 0.99
SCAMP4-204ENST00000414057 KIF4BQ2VIQ3 1234 aa21.22■□□□□ 0.99
SCAMP4-204ENST00000414057 ATF7IPQ6VMQ6 1270 aa21.22■□□□□ 0.99
SCAMP4-204ENST00000414057 C9orf78Q9NZ63 289 aaPredicted RBP21.22■□□□□ 0.99
SCAMP4-204ENST00000414057 C20orf194Q5TEA3 1177 aa21.21■□□□□ 0.99
SCAMP4-204ENST00000414057 EXOC6Q8TAG9 804 aa21.21■□□□□ 0.99
SCAMP4-204ENST00000414057 HHIPL1Q96JK4 782 aa21.21■□□□□ 0.99
SCAMP4-204ENST00000414057 COA1Q9GZY4 146 aa21.21■□□□□ 0.99
SCAMP4-204ENST00000414057 ZNF408Q9H9D4 720 aa21.21■□□□□ 0.99
SCAMP4-204ENST00000414057 CHMP3Q9Y3E7 222 aa21.21■□□□□ 0.99
SCAMP4-204ENST00000414057 KCNJ4P48050 445 aa21.2■□□□□ 0.98
SCAMP4-204ENST00000414057 SLC4A10Q6U841 1118 aa21.2■□□□□ 0.98
SCAMP4-204ENST00000414057 KRT26Q7Z3Y9 468 aa21.2■□□□□ 0.98
SCAMP4-204ENST00000414057 SAPCD2Q86UD0 394 aa21.2■□□□□ 0.98
SCAMP4-204ENST00000414057 USP48Q86UV5 1035 aa21.2■□□□□ 0.98
SCAMP4-204ENST00000414057 CAPNS2Q96L46 248 aa21.2■□□□□ 0.98
SCAMP4-204ENST00000414057 CRBNQ96SW2 442 aa21.2■□□□□ 0.98
SCAMP4-204ENST00000414057 SRCIN1Q9C0H9 1055 aa21.2■□□□□ 0.98
SCAMP4-204ENST00000414057 ZNF804BA4D1E1 1349 aa21.2■□□□□ 0.98
SCAMP4-204ENST00000414057 USP17L8P0C7I0 530 aa21.2■□□□□ 0.98
SCAMP4-204ENST00000414057 CTCFP49711 727 aaPredicted RBP21.2■□□□□ 0.98
SCAMP4-204ENST00000414057 DZIP1LQ8IYY4 767 aaKnown RBP21.2■□□□□ 0.98
SCAMP4-204ENST00000414057 TNS4Q8IZW8 715 aa21.2■□□□□ 0.98
SCAMP4-204ENST00000414057 WBP1LQ9NX94 342 aa21.2■□□□□ 0.98
SCAMP4-204ENST00000414057 NOB1Q9ULX3 412 aaKnown RBP21.2■□□□□ 0.98
SCAMP4-204ENST00000414057 ZNF280AP59817 542 aaPredicted RBP21.19■□□□□ 0.98
SCAMP4-204ENST00000414057 FOXO4P98177 505 aa21.19■□□□□ 0.98
SCAMP4-204ENST00000414057 CCDC57Q2TAC2 916 aa21.19■□□□□ 0.98
SCAMP4-204ENST00000414057 SULF1Q8IWU6 871 aa21.19■□□□□ 0.98
SCAMP4-204ENST00000414057 FTSJ3Q8IY81 847 aaKnown RBP21.19■□□□□ 0.98
SCAMP4-204ENST00000414057 MYO3BQ8WXR4 1341 aa21.19■□□□□ 0.98
SCAMP4-204ENST00000414057 TRPM7Q96QT4 1865 aa21.18■□□□□ 0.98
SCAMP4-204ENST00000414057 FOXN1O15353 648 aa21.18■□□□□ 0.98
SCAMP4-204ENST00000414057 TRIM27P14373 513 aa21.18■□□□□ 0.98
SCAMP4-204ENST00000414057 MMP14P50281 582 aa21.18■□□□□ 0.98
SCAMP4-204ENST00000414057 CHRNDQ07001 517 aa21.18■□□□□ 0.98
SCAMP4-204ENST00000414057 STRIP1Q5VSL9 837 aa21.18■□□□□ 0.98
SCAMP4-204ENST00000414057 CYP4F22Q6NT55 531 aa21.18■□□□□ 0.98
SCAMP4-204ENST00000414057 OGFOD1Q8N543 542 aa21.18■□□□□ 0.98
SCAMP4-204ENST00000414057 BEGAINQ9BUH8 593 aa21.18■□□□□ 0.98
SCAMP4-204ENST00000414057 EGFRP00533 1210 aa21.17■□□□□ 0.98
SCAMP4-204ENST00000414057 GRM1Q13255 1194 aa21.17■□□□□ 0.98
SCAMP4-204ENST00000414057 TAF7LQ5H9L4 462 aa21.17■□□□□ 0.98
SCAMP4-204ENST00000414057 LMBR1LQ6UX01 489 aa21.17■□□□□ 0.98
SCAMP4-204ENST00000414057 API5Q9BZZ5 524 aaKnown RBP21.17■□□□□ 0.98
SCAMP4-204ENST00000414057 PRDM10Q9NQV6 1147 aa21.17■□□□□ 0.98
SCAMP4-204ENST00000414057 PTPRCP08575 1304 aa21.17■□□□□ 0.98
SCAMP4-204ENST00000414057 MAP2K2P36507 400 aa21.16■□□□□ 0.98
SCAMP4-204ENST00000414057 GMLQ99445 158 aa21.16■□□□□ 0.98
SCAMP4-204ENST00000414057 MYOZ2Q9NPC6 264 aa21.16■□□□□ 0.98
SCAMP4-204ENST00000414057 WTIPA6NIX2 430 aaPredicted RBP21.15■□□□□ 0.98
SCAMP4-204ENST00000414057 C2orf69Q8N8R5 385 aa21.15■□□□□ 0.98
SCAMP4-204ENST00000414057 FBXW7Q969H0 707 aa21.15■□□□□ 0.98
SCAMP4-204ENST00000414057 GGA3Q9NZ52 723 aa21.15■□□□□ 0.98
SCAMP4-204ENST00000414057 SCN9AQ15858 1988 aa21.14■□□□□ 0.98
SCAMP4-204ENST00000414057 SCARF1Q14162 830 aa21.14■□□□□ 0.98
SCAMP4-204ENST00000414057 DACT2Q5SW24 774 aa21.14■□□□□ 0.98
SCAMP4-204ENST00000414057 PANK1Q8TE04 598 aa21.14■□□□□ 0.98
SCAMP4-204ENST00000414057 MVPQ14764 893 aaKnown RBP21.13■□□□□ 0.97
SCAMP4-204ENST00000414057 TTLL5Q6EMB2 1281 aa21.13■□□□□ 0.97
SCAMP4-204ENST00000414057 LDHAL6AQ6ZMR3 332 aa21.13■□□□□ 0.97
SCAMP4-204ENST00000414057 PITPNM2Q9BZ72 1349 aa21.13■□□□□ 0.97
SCAMP4-204ENST00000414057 HUNKP57058 714 aa21.13■□□□□ 0.97
SCAMP4-204ENST00000414057 ANGEL2Q5VTE6 544 aaKnown RBP21.13■□□□□ 0.97
SCAMP4-204ENST00000414057 C15orf52Q6ZUT6 534 aaKnown RBP21.13■□□□□ 0.97
SCAMP4-204ENST00000414057 TXNRD3Q86VQ6 643 aa21.13■□□□□ 0.97
SCAMP4-204ENST00000414057 CCDC136Q96JN2 1154 aa21.13■□□□□ 0.97
SCAMP4-204ENST00000414057 CHMP4BQ9H444 224 aaKnown RBP21.13■□□□□ 0.97
SCAMP4-204ENST00000414057 GBA2Q9HCG7 927 aaPredicted RBP21.13■□□□□ 0.97
SCAMP4-204ENST00000414057 CNNM1Q9NRU3 951 aa21.13■□□□□ 0.97
SCAMP4-204ENST00000414057 SPEF2Q9C093 1822 aa21.12■□□□□ 0.97
SCAMP4-204ENST00000414057 ADM5C9JUS6 153 aa21.12■□□□□ 0.97
SCAMP4-204ENST00000414057 HDAC9Q9UKV0 1011 aa21.12■□□□□ 0.97
SCAMP4-204ENST00000414057 DDX19BQ9UMR2 479 aa21.12■□□□□ 0.97
SCAMP4-204ENST00000414057 TAF5LO75529 589 aa21.11■□□□□ 0.97
SCAMP4-204ENST00000414057 RLBP1P12271 317 aa21.11■□□□□ 0.97
SCAMP4-204ENST00000414057 EPHA10Q5JZY3 1008 aa21.11■□□□□ 0.97
SCAMP4-204ENST00000414057 ZNF804AQ7Z570 1209 aa21.11■□□□□ 0.97
SCAMP4-204ENST00000414057 CLUAP1Q96AJ1 413 aa21.11■□□□□ 0.97
SCAMP4-204ENST00000414057 CD209Q9NNX6 404 aa21.11■□□□□ 0.97
SCAMP4-204ENST00000414057 COG6Q9Y2V7 657 aa21.11■□□□□ 0.97
SCAMP4-204ENST00000414057 UTYO14607 1347 aa21.1■□□□□ 0.97
SCAMP4-204ENST00000414057 PSME4Q14997 1843 aa21.1■□□□□ 0.97
SCAMP4-204ENST00000414057 NOGQ13253 232 aa21.1■□□□□ 0.97
SCAMP4-204ENST00000414057 HELBQ8NG08 1087 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms