RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 DALRD3Q5D0E6 543 aaKnown RBP14.26□□□□□ -0.13
HDAC9-206ENST00000413380 SOGA3Q5TF21 947 aa14.26□□□□□ -0.13
HDAC9-206ENST00000413380 NLGN2Q8NFZ4 835 aa14.26□□□□□ -0.13
HDAC9-206ENST00000413380 SYT17Q9BSW7 474 aa14.26□□□□□ -0.13
HDAC9-206ENST00000413380 RTFDC1Q9BY42 306 aaPredicted RBP14.26□□□□□ -0.13
HDAC9-206ENST00000413380 DBNLQ9UJU6 430 aaKnown RBP14.26□□□□□ -0.13
HDAC9-206ENST00000413380 PSME4Q14997 1843 aa14.26□□□□□ -0.13
HDAC9-206ENST00000413380 AK9Q5TCS8 1911 aa14.25□□□□□ -0.13
HDAC9-206ENST00000413380 MED23Q9ULK4 1368 aa14.25□□□□□ -0.13
HDAC9-206ENST00000413380 TAF5LO75529 589 aa14.25□□□□□ -0.13
HDAC9-206ENST00000413380 ATP2B4P23634 1241 aa14.25□□□□□ -0.13
HDAC9-206ENST00000413380 GPSM2P81274 684 aa14.25□□□□□ -0.13
HDAC9-206ENST00000413380 SLC51AQ86UW1 340 aa14.25□□□□□ -0.13
HDAC9-206ENST00000413380 AACSQ86V21 672 aa14.25□□□□□ -0.13
HDAC9-206ENST00000413380 SPDYE1Q8NFV5 336 aaPredicted RBP14.25□□□□□ -0.13
HDAC9-206ENST00000413380 HELBQ8NG08 1087 aaPredicted RBP14.25□□□□□ -0.13
HDAC9-206ENST00000413380 ZNF646O15015 1829 aaPredicted RBP14.25□□□□□ -0.13
HDAC9-206ENST00000413380 ZNF804BA4D1E1 1349 aa14.24□□□□□ -0.13
HDAC9-206ENST00000413380 TTC41PQ6P2S7 1318 aa14.24□□□□□ -0.13
HDAC9-206ENST00000413380 CHD4Q14839 1912 aa14.24□□□□□ -0.13
HDAC9-206ENST00000413380 DICER1Q9UPY3 1922 aaKnown RBP14.24□□□□□ -0.13
HDAC9-206ENST00000413380 IFIT1P09914 478 aaKnown RBP14.24□□□□□ -0.13
HDAC9-206ENST00000413380 SLC5A1P13866 664 aa14.24□□□□□ -0.13
HDAC9-206ENST00000413380 CCDC93Q567U6 631 aa14.24□□□□□ -0.13
HDAC9-206ENST00000413380 PLEKHM2Q8IWE5 1019 aa14.24□□□□□ -0.13
HDAC9-206ENST00000413380 C16orf71Q8IYS4 520 aaPredicted RBP14.24□□□□□ -0.13
HDAC9-206ENST00000413380 TBC1D16Q8TBP0 767 aa14.24□□□□□ -0.13
HDAC9-206ENST00000413380 OTUD7AQ8TE49 926 aaPredicted RBP14.24□□□□□ -0.13
HDAC9-206ENST00000413380 ZNF512BQ96KM6 892 aaPredicted RBP14.24□□□□□ -0.13
HDAC9-206ENST00000413380 PSMD1Q99460 953 aa14.24□□□□□ -0.13
HDAC9-206ENST00000413380 PPP1R1BQ9UD71 204 aaPredicted RBP14.24□□□□□ -0.13
HDAC9-206ENST00000413380 GGA1Q9UJY5 639 aa14.24□□□□□ -0.13
HDAC9-206ENST00000413380 SBF1O95248 1867 aa14.23□□□□□ -0.13
HDAC9-206ENST00000413380 DOCK2Q92608 1830 aa14.23□□□□□ -0.13
HDAC9-206ENST00000413380 IFIT2P09913 472 aaKnown RBP14.23□□□□□ -0.13
HDAC9-206ENST00000413380 MX1P20591 662 aa14.23□□□□□ -0.13
HDAC9-206ENST00000413380 PDE1AP54750 535 aa14.23□□□□□ -0.13
HDAC9-206ENST00000413380 TIMM10P62072 90 aa14.23□□□□□ -0.13
HDAC9-206ENST00000413380 RTKN2Q8IZC4 609 aa14.23□□□□□ -0.13
HDAC9-206ENST00000413380 MPNDQ8N594 471 aa14.23□□□□□ -0.13
HDAC9-206ENST00000413380 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.23□□□□□ -0.13
HDAC9-206ENST00000413380 XAGE2Q96GT9 111 aa14.23□□□□□ -0.13
HDAC9-206ENST00000413380 DBNDD2Q9BQY9 259 aa14.23□□□□□ -0.13
HDAC9-206ENST00000413380 TMX4Q9H1E5 349 aaPredicted RBP14.23□□□□□ -0.13
HDAC9-206ENST00000413380 TLR7Q9NYK1 1049 aaKnown RBP14.23□□□□□ -0.13
HDAC9-206ENST00000413380 ANKIB1Q9P2G1 1089 aa14.23□□□□□ -0.13
HDAC9-206ENST00000413380 POLLQ9UGP5 575 aa14.23□□□□□ -0.13
HDAC9-206ENST00000413380 NSFL1CQ9UNZ2 370 aaKnown RBP14.23□□□□□ -0.13
HDAC9-206ENST00000413380 CCDC88AQ3V6T2 1871 aa14.23□□□□□ -0.13
HDAC9-206ENST00000413380 LTBP3Q9NS15 1303 aa14.22□□□□□ -0.13
HDAC9-206ENST00000413380 MYH7P12883 1935 aa14.22□□□□□ -0.13
HDAC9-206ENST00000413380 SNAP23O00161 211 aa14.22□□□□□ -0.13
HDAC9-206ENST00000413380 UFL1O94874 794 aa14.22□□□□□ -0.13
HDAC9-206ENST00000413380 OLFM4Q6UX06 510 aa14.22□□□□□ -0.13
HDAC9-206ENST00000413380 FBXO33Q7Z6M2 555 aa14.22□□□□□ -0.13
HDAC9-206ENST00000413380 KLHL34Q8N239 644 aa14.22□□□□□ -0.13
HDAC9-206ENST00000413380 PI4K2BQ8TCG2 481 aa14.22□□□□□ -0.13
HDAC9-206ENST00000413380 CCDC8Q9H0W5 538 aaPredicted RBP14.22□□□□□ -0.13
HDAC9-206ENST00000413380 WTIPA6NIX2 430 aaPredicted RBP14.21□□□□□ -0.13
HDAC9-206ENST00000413380 C21orf2O43822 256 aa14.21□□□□□ -0.13
HDAC9-206ENST00000413380 ATP5JP18859 108 aa14.21□□□□□ -0.13
HDAC9-206ENST00000413380 ARID4AP29374 1257 aaPredicted RBP14.21□□□□□ -0.13
HDAC9-206ENST00000413380 ADORA1P30542 326 aa14.21□□□□□ -0.13
HDAC9-206ENST00000413380 DPP8Q6V1X1 898 aaPredicted RBP14.21□□□□□ -0.13
HDAC9-206ENST00000413380 GPATCH3Q96I76 525 aa14.21□□□□□ -0.13
HDAC9-206ENST00000413380 VPS33BQ9H267 617 aa14.21□□□□□ -0.13
HDAC9-206ENST00000413380 ECHDC1Q9NTX5 307 aa14.21□□□□□ -0.13
HDAC9-206ENST00000413380 UTRNP46939 3433 aa14.21□□□□□ -0.14
HDAC9-206ENST00000413380 PDS5AQ29RF7 1337 aaKnown RBP14.2□□□□□ -0.14
HDAC9-206ENST00000413380 SCN9AQ15858 1988 aa14.2□□□□□ -0.14
HDAC9-206ENST00000413380 KCNJ4P48050 445 aa14.2□□□□□ -0.14
HDAC9-206ENST00000413380 CCDC102BQ68D86 513 aa14.2□□□□□ -0.14
HDAC9-206ENST00000413380 SUPT20HQ8NEM7 779 aa14.2□□□□□ -0.14
HDAC9-206ENST00000413380 FAM84BQ96KN1 310 aaPredicted RBP14.2□□□□□ -0.14
HDAC9-206ENST00000413380 NEUROD6Q96NK8 337 aa14.2□□□□□ -0.14
HDAC9-206ENST00000413380 MYO5AQ9Y4I1 1855 aaKnown RBP14.2□□□□□ -0.14
HDAC9-206ENST00000413380 SEMA3EO15041 775 aa14.19□□□□□ -0.14
HDAC9-206ENST00000413380 ERC2O15083 957 aa14.19□□□□□ -0.14
HDAC9-206ENST00000413380 GLRX3O76003 335 aaKnown RBP14.19□□□□□ -0.14
HDAC9-206ENST00000413380 KLRK1P26718 216 aa14.19□□□□□ -0.14
HDAC9-206ENST00000413380 FKBP4Q02790 459 aaKnown RBP eCLIP14.19□□□□□ -0.14
HDAC9-206ENST00000413380 CCDC158Q5M9N0 1113 aa14.19□□□□□ -0.14
HDAC9-206ENST00000413380 TXNRD3Q86VQ6 643 aa14.19□□□□□ -0.14
HDAC9-206ENST00000413380 SKAP1Q86WV1 359 aa14.19□□□□□ -0.14
HDAC9-206ENST00000413380 EYA3Q99504 573 aa14.19□□□□□ -0.14
HDAC9-206ENST00000413380 BCS1LQ9Y276 419 aa14.19□□□□□ -0.14
HDAC9-206ENST00000413380 NFKBIEO00221 500 aa14.18□□□□□ -0.14
HDAC9-206ENST00000413380 PITPNM1O00562 1244 aa14.18□□□□□ -0.14
HDAC9-206ENST00000413380 UQCRFS1P1P0C7P4 283 aa14.18□□□□□ -0.14
HDAC9-206ENST00000413380 PHKA1P46020 1223 aa14.18□□□□□ -0.14
HDAC9-206ENST00000413380 KIAA2012Q0VF49 1180 aa14.18□□□□□ -0.14
HDAC9-206ENST00000413380 CAVIN4Q5BKX8 364 aa14.18□□□□□ -0.14
HDAC9-206ENST00000413380 COL1A1P02452 1464 aaPredicted RBP14.18□□□□□ -0.14
HDAC9-206ENST00000413380 C6orf229H3BNL8 230 aa14.17□□□□□ -0.14
HDAC9-206ENST00000413380 IL1R1P14778 569 aa14.17□□□□□ -0.14
HDAC9-206ENST00000413380 HIBADHP31937 336 aaKnown RBP14.17□□□□□ -0.14
HDAC9-206ENST00000413380 BCAMP50895 628 aa14.17□□□□□ -0.14
HDAC9-206ENST00000413380 BMP2KLQ5H9B9 411 aa14.17□□□□□ -0.14
HDAC9-206ENST00000413380 TTC22Q5TAA0 569 aa14.17□□□□□ -0.14
HDAC9-206ENST00000413380 ZNF804AQ7Z570 1209 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms