RNA–Protein interactions for RNA: ENST00000413197.5

COPS7B-210, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 2,442 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-210ENST00000413197 HDAC5Q9UQL6 1122 aa16.23■□□□□ 0.19
COPS7B-210ENST00000413197 AFF2P51816 1311 aa16.23■□□□□ 0.19
COPS7B-210ENST00000413197 SPATA31A5Q5VU36 1347 aa16.23■□□□□ 0.19
COPS7B-210ENST00000413197 SPATA31A7Q8IWB4 1347 aa16.23■□□□□ 0.19
COPS7B-210ENST00000413197 DISP2A7MBM2 1401 aa16.22■□□□□ 0.19
COPS7B-210ENST00000413197 KCNQ3O43525 872 aa16.22■□□□□ 0.19
COPS7B-210ENST00000413197 ANXA1P04083 346 aa16.22■□□□□ 0.19
COPS7B-210ENST00000413197 AMOTQ4VCS5 1084 aa16.22■□□□□ 0.19
COPS7B-210ENST00000413197 GTF3C6Q969F1 213 aa16.22■□□□□ 0.19
COPS7B-210ENST00000413197 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.22■□□□□ 0.19
COPS7B-210ENST00000413197 FAM98CQ17RN3 349 aaKnown RBP16.21■□□□□ 0.19
COPS7B-210ENST00000413197 ZCRB1Q8TBF4 217 aaKnown RBP16.21■□□□□ 0.19
COPS7B-210ENST00000413197 KCND1Q9NSA2 647 aa16.21■□□□□ 0.19
COPS7B-210ENST00000413197 C9orf78Q9NZ63 289 aaPredicted RBP16.21■□□□□ 0.19
COPS7B-210ENST00000413197 PKD1L3Q7Z443 1732 aa16.21■□□□□ 0.19
COPS7B-210ENST00000413197 MMP14P50281 582 aa16.21■□□□□ 0.19
COPS7B-210ENST00000413197 C1orf141Q5JVX7 400 aa16.21■□□□□ 0.19
COPS7B-210ENST00000413197 TAF3Q5VWG9 929 aa16.21■□□□□ 0.19
COPS7B-210ENST00000413197 USPL1Q5W0Q7 1092 aa16.21■□□□□ 0.19
COPS7B-210ENST00000413197 ZSCAN16Q9H4T2 348 aaPredicted RBP16.21■□□□□ 0.19
COPS7B-210ENST00000413197 NWD2Q9ULI1 1742 aa16.21■□□□□ 0.18
COPS7B-210ENST00000413197 USP27XA6NNY8 438 aa16.2■□□□□ 0.18
COPS7B-210ENST00000413197 RNMTO43148 476 aaKnown RBP16.2■□□□□ 0.18
COPS7B-210ENST00000413197 SLFN14P0C7P3 912 aa16.2■□□□□ 0.18
COPS7B-210ENST00000413197 FAM53CQ9NYF3 392 aa16.2■□□□□ 0.18
COPS7B-210ENST00000413197 DBF4Q9UBU7 674 aaPredicted RBP16.2■□□□□ 0.18
COPS7B-210ENST00000413197 GOLGA6L19H0YKK7 550 aa16.2■□□□□ 0.18
COPS7B-210ENST00000413197 CTAGE5O15320 804 aa16.2■□□□□ 0.18
COPS7B-210ENST00000413197 JAK2O60674 1132 aa16.2■□□□□ 0.18
COPS7B-210ENST00000413197 STK3Q13188 491 aa16.2■□□□□ 0.18
COPS7B-210ENST00000413197 C11orf57Q6ZUT1 292 aaPredicted RBP16.2■□□□□ 0.18
COPS7B-210ENST00000413197 ZNF589Q86UQ0 364 aaPredicted RBP16.2■□□□□ 0.18
COPS7B-210ENST00000413197 ZNF397Q8NF99 534 aaPredicted RBP16.2■□□□□ 0.18
COPS7B-210ENST00000413197 BRF1Q92994 677 aa16.2■□□□□ 0.18
COPS7B-210ENST00000413197 CFAP45Q9UL16 551 aa16.2■□□□□ 0.18
COPS7B-210ENST00000413197 MAP3K2Q9Y2U5 619 aa16.2■□□□□ 0.18
COPS7B-210ENST00000413197 UTYO14607 1347 aa16.19■□□□□ 0.18
COPS7B-210ENST00000413197 KAZALD1Q96I82 304 aa16.19■□□□□ 0.18
COPS7B-210ENST00000413197 FSD1Q9BTV5 496 aa16.19■□□□□ 0.18
COPS7B-210ENST00000413197 PARP4Q9UKK3 1724 aaKnown RBP16.19■□□□□ 0.18
COPS7B-210ENST00000413197 TAF5LO75529 589 aa16.19■□□□□ 0.18
COPS7B-210ENST00000413197 CCZ1BP86790 482 aa16.19■□□□□ 0.18
COPS7B-210ENST00000413197 CCZ1P86791 482 aaPredicted RBP16.19■□□□□ 0.18
COPS7B-210ENST00000413197 KRT32Q14532 448 aa16.19■□□□□ 0.18
COPS7B-210ENST00000413197 ARID5BQ14865 1188 aa16.19■□□□□ 0.18
COPS7B-210ENST00000413197 STX1AQ16623 288 aa16.19■□□□□ 0.18
COPS7B-210ENST00000413197 KSR2Q6VAB6 950 aa16.19■□□□□ 0.18
COPS7B-210ENST00000413197 CCDC8Q9H0W5 538 aaPredicted RBP16.19■□□□□ 0.18
COPS7B-210ENST00000413197 TLR7Q9NYK1 1049 aaKnown RBP16.19■□□□□ 0.18
COPS7B-210ENST00000413197 ZNF215Q9UL58 517 aaPredicted RBP16.19■□□□□ 0.18
COPS7B-210ENST00000413197 ADD1P35611 737 aaKnown RBP16.18■□□□□ 0.18
COPS7B-210ENST00000413197 PTPN14Q15678 1187 aa16.18■□□□□ 0.18
COPS7B-210ENST00000413197 KMT5BQ4FZB7 885 aa16.18■□□□□ 0.18
COPS7B-210ENST00000413197 ZNF771Q7L3S4 317 aaPredicted RBP16.18■□□□□ 0.18
COPS7B-210ENST00000413197 MRC1P22897 1456 aa16.18■□□□□ 0.18
COPS7B-210ENST00000413197 SKILP12757 684 aa16.18■□□□□ 0.18
COPS7B-210ENST00000413197 SLFNL1Q499Z3 407 aa16.18■□□□□ 0.18
COPS7B-210ENST00000413197 FAM182BQ5T319 152 aa16.18■□□□□ 0.18
COPS7B-210ENST00000413197 IFNL2Q8IZJ0 200 aa16.18■□□□□ 0.18
COPS7B-210ENST00000413197 BOLA2Q9H3K6 86 aa16.18■□□□□ 0.18
COPS7B-210ENST00000413197 G3BP1Q13283 466 aaKnown RBP eCLIP16.17■□□□□ 0.18
COPS7B-210ENST00000413197 SLC39A6Q13433 755 aa16.17■□□□□ 0.18
COPS7B-210ENST00000413197 NFATC2IPQ8NCF5 419 aa16.17■□□□□ 0.18
COPS7B-210ENST00000413197 SMARCC2Q8TAQ2 1214 aa16.17■□□□□ 0.18
COPS7B-210ENST00000413197 ERO1AQ96HE7 468 aa16.17■□□□□ 0.18
COPS7B-210ENST00000413197 SUCLG2Q96I99 432 aa16.17■□□□□ 0.18
COPS7B-210ENST00000413197 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.17■□□□□ 0.188e-10■■■□□ 14.8
COPS7B-210ENST00000413197 RCOR1Q9UKL0 485 aa16.17■□□□□ 0.18
COPS7B-210ENST00000413197 KAT6BQ8WYB5 2073 aa16.17■□□□□ 0.18
COPS7B-210ENST00000413197 CWF19L2Q2TBE0 894 aaKnown RBP16.17■□□□□ 0.18
COPS7B-210ENST00000413197 DHX40Q8IX18 779 aaKnown RBP16.17■□□□□ 0.18
COPS7B-210ENST00000413197 KRT222Q8N1A0 295 aa16.17■□□□□ 0.18
COPS7B-210ENST00000413197 CCDC69A6NI79 296 aa16.16■□□□□ 0.18
COPS7B-210ENST00000413197 GRM8O00222 908 aa16.16■□□□□ 0.18
COPS7B-210ENST00000413197 SNW1Q13573 536 aaKnown RBP16.16■□□□□ 0.18
COPS7B-210ENST00000413197 TERF2Q15554 542 aa16.16■□□□□ 0.18
COPS7B-210ENST00000413197 VPS72Q15906 364 aa16.16■□□□□ 0.18
COPS7B-210ENST00000413197 CCAR2Q8N163 923 aaKnown RBP16.16■□□□□ 0.18
COPS7B-210ENST00000413197 NEK1Q96PY6 1258 aa16.16■□□□□ 0.18
COPS7B-210ENST00000413197 COL15A1P39059 1388 aa16.16■□□□□ 0.18
COPS7B-210ENST00000413197 BTBD11A6QL63 1104 aa16.16■□□□□ 0.18
COPS7B-210ENST00000413197 FBXO41Q8TF61 875 aa16.16■□□□□ 0.18
COPS7B-210ENST00000413197 DDX11Q96FC9 970 aa16.16■□□□□ 0.18
COPS7B-210ENST00000413197 BICC1Q9H694 974 aaKnown RBP16.16■□□□□ 0.18
COPS7B-210ENST00000413197 USP16Q9Y5T5 823 aa16.16■□□□□ 0.18
COPS7B-210ENST00000413197 HEG1Q9ULI3 1381 aa16.16■□□□□ 0.18
COPS7B-210ENST00000413197 PCDH11XQ9BZA7 1347 aa16.15■□□□□ 0.18
COPS7B-210ENST00000413197 PCDH11YQ9BZA8 1340 aa16.15■□□□□ 0.18
COPS7B-210ENST00000413197 H3BQV1 296 aa16.15■□□□□ 0.18
COPS7B-210ENST00000413197 PROSER3Q2NL68 480 aa16.15■□□□□ 0.18
COPS7B-210ENST00000413197 IFFO2Q5TF58 517 aa16.15■□□□□ 0.18
COPS7B-210ENST00000413197 LINS1Q8NG48 757 aa16.15■□□□□ 0.18
COPS7B-210ENST00000413197 GOLPH3LQ9H4A5 285 aa16.15■□□□□ 0.18
COPS7B-210ENST00000413197 WNK3Q9BYP7 1800 aa16.15■□□□□ 0.18
COPS7B-210ENST00000413197 GLI3P10071 1580 aa16.15■□□□□ 0.18
COPS7B-210ENST00000413197 PRAMEF22A3QJZ6 481 aa16.15■□□□□ 0.18
COPS7B-210ENST00000413197 NAA16Q6N069 864 aaPredicted RBP16.15■□□□□ 0.18
COPS7B-210ENST00000413197 CCAR1Q8IX12 1150 aaKnown RBP16.15■□□□□ 0.18
COPS7B-210ENST00000413197 PLCD3Q8N3E9 789 aa16.15■□□□□ 0.18
COPS7B-210ENST00000413197 ENGASEQ8NFI3 743 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms