RNA–Protein interactions for RNA: ENST00000412913.1

SMARCAL1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 538 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-204ENST00000412913 ZBTB47Q9UFB7 747 aaPredicted RBP12.97□□□□□ -0.33
SMARCAL1-204ENST00000412913 MED23Q9ULK4 1368 aa12.96□□□□□ -0.33
SMARCAL1-204ENST00000412913 ZNF804BA4D1E1 1349 aa12.96□□□□□ -0.33
SMARCAL1-204ENST00000412913 SLC5A1P13866 664 aa12.96□□□□□ -0.33
SMARCAL1-204ENST00000412913 UBE4AQ14139 1066 aa12.96□□□□□ -0.33
SMARCAL1-204ENST00000412913 TTC22Q5TAA0 569 aa12.96□□□□□ -0.33
SMARCAL1-204ENST00000412913 TTLL6Q8N841 843 aa12.96□□□□□ -0.33
SMARCAL1-204ENST00000412913 FHDC1Q9C0D6 1143 aaPredicted RBP12.96□□□□□ -0.33
SMARCAL1-204ENST00000412913 SCN9AQ15858 1988 aa12.96□□□□□ -0.34
SMARCAL1-204ENST00000412913 C15orf52Q6ZUT6 534 aaKnown RBP12.95□□□□□ -0.34
SMARCAL1-204ENST00000412913 KLHL34Q8N239 644 aa12.95□□□□□ -0.34
SMARCAL1-204ENST00000412913 NEUROD6Q96NK8 337 aa12.95□□□□□ -0.34
SMARCAL1-204ENST00000412913 GPR101Q96P66 508 aaPredicted RBP12.95□□□□□ -0.34
SMARCAL1-204ENST00000412913 ECHDC1Q9NTX5 307 aa12.95□□□□□ -0.34
SMARCAL1-204ENST00000412913 PPP1R1BQ9UD71 204 aaPredicted RBP12.95□□□□□ -0.34
SMARCAL1-204ENST00000412913 POLLQ9UGP5 575 aa12.95□□□□□ -0.34
SMARCAL1-204ENST00000412913 LEMD3Q9Y2U8 911 aa12.95□□□□□ -0.34
SMARCAL1-204ENST00000412913 CCDC88AQ3V6T2 1871 aa12.95□□□□□ -0.34
SMARCAL1-204ENST00000412913 UFL1O94874 794 aa12.94□□□□□ -0.34
SMARCAL1-204ENST00000412913 IFIT1P09914 478 aaKnown RBP12.94□□□□□ -0.34
SMARCAL1-204ENST00000412913 ARID4AP29374 1257 aaPredicted RBP12.94□□□□□ -0.34
SMARCAL1-204ENST00000412913 PHKA1P46020 1223 aa12.94□□□□□ -0.34
SMARCAL1-204ENST00000412913 TXNRD3Q86VQ6 643 aa12.94□□□□□ -0.34
SMARCAL1-204ENST00000412913 TBC1D16Q8TBP0 767 aa12.94□□□□□ -0.34
SMARCAL1-204ENST00000412913 PIM2Q9P1W9 311 aa12.94□□□□□ -0.34
SMARCAL1-204ENST00000412913 ANKIB1Q9P2G1 1089 aa12.94□□□□□ -0.34
SMARCAL1-204ENST00000412913 DICER1Q9UPY3 1922 aaKnown RBP12.94□□□□□ -0.34
SMARCAL1-204ENST00000412913 TIAM2Q8IVF5 1701 aa12.93□□□□□ -0.34
SMARCAL1-204ENST00000412913 C21orf2O43822 256 aa12.93□□□□□ -0.34
SMARCAL1-204ENST00000412913 ATP5JP18859 108 aa12.93□□□□□ -0.34
SMARCAL1-204ENST00000412913 ATP2B4P23634 1241 aa12.93□□□□□ -0.34
SMARCAL1-204ENST00000412913 SCARF1Q14162 830 aa12.93□□□□□ -0.34
SMARCAL1-204ENST00000412913 CCDC102BQ68D86 513 aa12.93□□□□□ -0.34
SMARCAL1-204ENST00000412913 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.93□□□□□ -0.34
SMARCAL1-204ENST00000412913 ZNF512BQ96KM6 892 aaPredicted RBP12.93□□□□□ -0.34
SMARCAL1-204ENST00000412913 RTFDC1Q9BY42 306 aaPredicted RBP12.93□□□□□ -0.34
SMARCAL1-204ENST00000412913 GGA1Q9UJY5 639 aa12.93□□□□□ -0.34
SMARCAL1-204ENST00000412913 NSFL1CQ9UNZ2 370 aaKnown RBP12.93□□□□□ -0.34
SMARCAL1-204ENST00000412913 SBF1O95248 1867 aa12.93□□□□□ -0.34
SMARCAL1-204ENST00000412913 ZBTB22O15209 634 aa12.92□□□□□ -0.34
SMARCAL1-204ENST00000412913 GLRX3O76003 335 aaKnown RBP12.92□□□□□ -0.34
SMARCAL1-204ENST00000412913 MCAMP43121 646 aa12.92□□□□□ -0.34
SMARCAL1-204ENST00000412913 GYG1P46976 350 aa12.92□□□□□ -0.34
SMARCAL1-204ENST00000412913 DALRD3Q5D0E6 543 aaKnown RBP12.92□□□□□ -0.34
SMARCAL1-204ENST00000412913 BMP2KLQ5H9B9 411 aa12.92□□□□□ -0.34
SMARCAL1-204ENST00000412913 MPNDQ8N594 471 aa12.92□□□□□ -0.34
SMARCAL1-204ENST00000412913 GPATCH3Q96I76 525 aa12.92□□□□□ -0.34
SMARCAL1-204ENST00000412913 FAM84BQ96KN1 310 aaPredicted RBP12.92□□□□□ -0.34
SMARCAL1-204ENST00000412913 ZNF219Q9P2Y4 722 aaPredicted RBP12.92□□□□□ -0.34
SMARCAL1-204ENST00000412913 WWC3Q9ULE0 1092 aa12.92□□□□□ -0.34
SMARCAL1-204ENST00000412913 KCNJ4P48050 445 aa12.91□□□□□ -0.34
SMARCAL1-204ENST00000412913 BCAMP50895 628 aa12.91□□□□□ -0.34
SMARCAL1-204ENST00000412913 CCDC93Q567U6 631 aa12.91□□□□□ -0.34
SMARCAL1-204ENST00000412913 CC2D2BQ6DHV5 1058 aa12.91□□□□□ -0.34
SMARCAL1-204ENST00000412913 PI16Q6UXB8 463 aa12.91□□□□□ -0.34
SMARCAL1-204ENST00000412913 DPP8Q6V1X1 898 aaPredicted RBP12.91□□□□□ -0.34
SMARCAL1-204ENST00000412913 FBXO33Q7Z6M2 555 aa12.91□□□□□ -0.34
SMARCAL1-204ENST00000412913 SYT17Q9BSW7 474 aa12.91□□□□□ -0.34
SMARCAL1-204ENST00000412913 NDUFB9Q9Y6M9 179 aa12.91□□□□□ -0.34
SMARCAL1-204ENST00000412913 ADAMTSL1Q8N6G6 1762 aa12.91□□□□□ -0.34
SMARCAL1-204ENST00000412913 ERC2O15083 957 aa12.9□□□□□ -0.34
SMARCAL1-204ENST00000412913 RASGRF1Q13972 1273 aa12.9□□□□□ -0.34
SMARCAL1-204ENST00000412913 TTC39AQ5SRH9 613 aa12.9□□□□□ -0.34
SMARCAL1-204ENST00000412913 PSMD1Q99460 953 aa12.9□□□□□ -0.34
SMARCAL1-204ENST00000412913 HAUS7Q99871 368 aa12.9□□□□□ -0.34
SMARCAL1-204ENST00000412913 BOLA2Q9H3K6 86 aa12.9□□□□□ -0.34
SMARCAL1-204ENST00000412913 NFKBIEO00221 500 aa12.89□□□□□ -0.35
SMARCAL1-204ENST00000412913 MAP4K4O95819 1239 aaPredicted RBP12.89□□□□□ -0.35
SMARCAL1-204ENST00000412913 SDSP20132 328 aa12.89□□□□□ -0.35
SMARCAL1-204ENST00000412913 CCDC158Q5M9N0 1113 aa12.89□□□□□ -0.35
SMARCAL1-204ENST00000412913 EDC3Q96F86 508 aaKnown RBP12.89□□□□□ -0.35
SMARCAL1-204ENST00000412913 BCS1LQ9Y276 419 aa12.89□□□□□ -0.35
SMARCAL1-204ENST00000412913 RFX7Q2KHR2 1363 aa12.89□□□□□ -0.35
SMARCAL1-204ENST00000412913 PDS5AQ29RF7 1337 aaKnown RBP12.88□□□□□ -0.35
SMARCAL1-204ENST00000412913 C6orf229H3BNL8 230 aa12.88□□□□□ -0.35
SMARCAL1-204ENST00000412913 UQCRFS1P1P0C7P4 283 aa12.88□□□□□ -0.35
SMARCAL1-204ENST00000412913 ZAP70P43403 619 aa12.88□□□□□ -0.35
SMARCAL1-204ENST00000412913 FKBP4Q02790 459 aaKnown RBP eCLIP12.88□□□□□ -0.35
SMARCAL1-204ENST00000412913 GRIPAP1Q4V328 841 aa12.88□□□□□ -0.35
SMARCAL1-204ENST00000412913 GORABQ5T7V8 394 aa12.88□□□□□ -0.35
SMARCAL1-204ENST00000412913 SOGA3Q5TF21 947 aa12.88□□□□□ -0.35
SMARCAL1-204ENST00000412913 ANTXR1Q9H6X2 564 aa12.88□□□□□ -0.35
SMARCAL1-204ENST00000412913 HMG20BQ9P0W2 317 aa12.88□□□□□ -0.35
SMARCAL1-204ENST00000412913 LTBP3Q9NS15 1303 aa12.88□□□□□ -0.35
SMARCAL1-204ENST00000412913 IL1R1P14778 569 aa12.87□□□□□ -0.35
SMARCAL1-204ENST00000412913 HIBADHP31937 336 aaKnown RBP12.87□□□□□ -0.35
SMARCAL1-204ENST00000412913 KIAA2012Q0VF49 1180 aa12.87□□□□□ -0.35
SMARCAL1-204ENST00000412913 C8orf34Q49A92 452 aa12.87□□□□□ -0.35
SMARCAL1-204ENST00000412913 CAVIN4Q5BKX8 364 aa12.87□□□□□ -0.35
SMARCAL1-204ENST00000412913 ZNF804AQ7Z570 1209 aa12.87□□□□□ -0.35
SMARCAL1-204ENST00000412913 RTKN2Q8IZC4 609 aa12.87□□□□□ -0.35
SMARCAL1-204ENST00000412913 TDRD7Q8NHU6 1098 aaKnown RBP12.87□□□□□ -0.35
SMARCAL1-204ENST00000412913 EYA3Q99504 573 aa12.87□□□□□ -0.35
SMARCAL1-204ENST00000412913 DNAJC2Q99543 621 aaKnown RBP12.87□□□□□ -0.35
SMARCAL1-204ENST00000412913 CD209Q9NNX6 404 aa12.87□□□□□ -0.35
SMARCAL1-204ENST00000412913 IQSEC3Q9UPP2 1182 aaPredicted RBP12.87□□□□□ -0.35
SMARCAL1-204ENST00000412913 GOLGB1Q14789 3259 aaKnown RBP12.86□□□□□ -0.35
SMARCAL1-204ENST00000412913 SEMA3EO15041 775 aa12.86□□□□□ -0.35
SMARCAL1-204ENST00000412913 CYP2E1P05181 493 aaPredicted RBP12.86□□□□□ -0.35
SMARCAL1-204ENST00000412913 PRELPP51888 382 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms