RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 MCAMP43121 646 aa29.22■■■□□ 2.27
VRK2-202ENST00000412104 STOX1Q6ZVD7 989 aa29.22■■■□□ 2.27
VRK2-202ENST00000412104 FOXD4L6Q3SYB3 417 aaPredicted RBP29.21■■■□□ 2.27
VRK2-202ENST00000412104 FOXD4L3Q6VB84 417 aaPredicted RBP29.21■■■□□ 2.27
VRK2-202ENST00000412104 ZNF512BQ96KM6 892 aaPredicted RBP29.21■■■□□ 2.27
VRK2-202ENST00000412104 NIP7Q9Y221 180 aaKnown RBP eCLIP29.21■■■□□ 2.27
VRK2-202ENST00000412104 MROH5Q6ZUA9 1318 aa29.2■■■□□ 2.27
VRK2-202ENST00000412104 DTNBO60941 627 aa29.2■■■□□ 2.26
VRK2-202ENST00000412104 NTSR2O95665 410 aa29.2■■■□□ 2.26
VRK2-202ENST00000412104 TCHHQ07283 1943 aa29.19■■■□□ 2.26
VRK2-202ENST00000412104 F13A1P00488 732 aa29.19■■■□□ 2.26
VRK2-202ENST00000412104 MBD3O95983 291 aa29.18■■■□□ 2.26
VRK2-202ENST00000412104 PUM3Q15397 648 aaKnown RBP29.18■■■□□ 2.26
VRK2-202ENST00000412104 ZSCAN23Q3MJ62 389 aa29.18■■■□□ 2.26
VRK2-202ENST00000412104 LINC00116Q8NCU8 138 aa29.18■■■□□ 2.26
VRK2-202ENST00000412104 PANK2Q9BZ23 570 aa29.18■■■□□ 2.26
VRK2-202ENST00000412104 WASHC4Q2M389 1173 aa29.18■■■□□ 2.26
VRK2-202ENST00000412104 Q6ZUG5 572 aa29.18■■■□□ 2.26
VRK2-202ENST00000412104 MTMR6Q9Y217 621 aa29.18■■■□□ 2.26
VRK2-202ENST00000412104 HMGB1P09429 215 aaKnown RBP29.17■■■□□ 2.26
VRK2-202ENST00000412104 FNBP4Q8N3X1 1017 aaPredicted RBP29.17■■■□□ 2.26
VRK2-202ENST00000412104 APPBP2Q92624 585 aa29.17■■■□□ 2.26
VRK2-202ENST00000412104 NSFL1CQ9UNZ2 370 aaKnown RBP29.17■■■□□ 2.26
VRK2-202ENST00000412104 ZNF652Q9Y2D9 606 aa29.17■■■□□ 2.26
VRK2-202ENST00000412104 ZNF445P59923 1031 aa29.16■■■□□ 2.26
VRK2-202ENST00000412104 A0A0G2JLW4 131 aa29.16■■■□□ 2.26
VRK2-202ENST00000412104 FGFR2P21802 821 aa29.16■■■□□ 2.26
VRK2-202ENST00000412104 LPIN2Q92539 896 aa29.16■■■□□ 2.26
VRK2-202ENST00000412104 GDPD2Q9HCC8 539 aa29.16■■■□□ 2.26
VRK2-202ENST00000412104 SEC31BQ9NQW1 1179 aa29.16■■■□□ 2.26
VRK2-202ENST00000412104 RBM27Q9P2N5 1060 aaKnown RBP29.16■■■□□ 2.26
VRK2-202ENST00000412104 ARID4AP29374 1257 aaPredicted RBP29.15■■■□□ 2.26
VRK2-202ENST00000412104 CCDC152Q4G0S7 254 aa29.15■■■□□ 2.26
VRK2-202ENST00000412104 CCDC102BQ68D86 513 aa29.15■■■□□ 2.26
VRK2-202ENST00000412104 HELBQ8NG08 1087 aaPredicted RBP29.15■■■□□ 2.26
VRK2-202ENST00000412104 RTL9Q8NET4 1388 aa29.15■■■□□ 2.26
VRK2-202ENST00000412104 HSP90B1P14625 803 aaKnown RBP29.14■■■□□ 2.26
VRK2-202ENST00000412104 PHKA1P46020 1223 aa29.14■■■□□ 2.26
VRK2-202ENST00000412104 STK3Q13188 491 aa29.14■■■□□ 2.26
VRK2-202ENST00000412104 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.14■■■□□ 2.26
VRK2-202ENST00000412104 ATP6V1DQ9Y5K8 247 aa29.14■■■□□ 2.26
VRK2-202ENST00000412104 THSD7AQ9UPZ6 1657 aa29.14■■■□□ 2.26
VRK2-202ENST00000412104 DHX32Q7L7V1 743 aaKnown RBP29.14■■■□□ 2.25
VRK2-202ENST00000412104 TMEM87AQ8NBN3 555 aa29.14■■■□□ 2.25
VRK2-202ENST00000412104 MPHOSPH8Q99549 860 aa29.14■■■□□ 2.25
VRK2-202ENST00000412104 MYO5AQ9Y4I1 1855 aaKnown RBP29.13■■■□□ 2.25
VRK2-202ENST00000412104 E7EWF7 191 aa29.13■■■□□ 2.25
VRK2-202ENST00000412104 FOXP2O15409 715 aa29.13■■■□□ 2.25
VRK2-202ENST00000412104 USP48Q86UV5 1035 aa29.13■■■□□ 2.25
VRK2-202ENST00000412104 GTF3C6Q969F1 213 aa29.13■■■□□ 2.25
VRK2-202ENST00000412104 PUS7LQ9H0K6 701 aaKnown RBP29.13■■■□□ 2.25
VRK2-202ENST00000412104 UQCRFS1P1P0C7P4 283 aa29.12■■■□□ 2.25
VRK2-202ENST00000412104 TTF1Q15361 905 aaPredicted RBP29.12■■■□□ 2.25
VRK2-202ENST00000412104 CLEC4GQ6UXB4 293 aa29.12■■■□□ 2.25
VRK2-202ENST00000412104 LRRC2Q9BYS8 371 aa29.12■■■□□ 2.25
VRK2-202ENST00000412104 TMEM63CQ9P1W3 806 aa29.12■■■□□ 2.25
VRK2-202ENST00000412104 CNPY2Q9Y2B0 182 aa29.12■■■□□ 2.25
VRK2-202ENST00000412104 SCN7AQ01118 1682 aa29.12■■■□□ 2.25
VRK2-202ENST00000412104 BTAF1O14981 1849 aa29.12■■■□□ 2.25
VRK2-202ENST00000412104 TTLL5Q6EMB2 1281 aa29.12■■■□□ 2.25
VRK2-202ENST00000412104 CNTNAP4Q9C0A0 1308 aa29.11■■■□□ 2.25
VRK2-202ENST00000412104 VPS37CA5D8V6 355 aaPredicted RBP29.11■■■□□ 2.25
VRK2-202ENST00000412104 PDIA4P13667 645 aaKnown RBP29.11■■■□□ 2.25
VRK2-202ENST00000412104 SLC5A1P13866 664 aa29.11■■■□□ 2.25
VRK2-202ENST00000412104 KCNQ4P56696 695 aa29.11■■■□□ 2.25
VRK2-202ENST00000412104 LARP1BQ659C4 914 aaKnown RBP29.11■■■□□ 2.25
VRK2-202ENST00000412104 ZSCAN25Q6NSZ9 544 aa29.11■■■□□ 2.25
VRK2-202ENST00000412104 PTF1AQ7RTS3 328 aa29.11■■■□□ 2.25
VRK2-202ENST00000412104 BRF1Q92994 677 aa29.11■■■□□ 2.25
VRK2-202ENST00000412104 ATRNO75882 1429 aa29.11■■■□□ 2.25
VRK2-202ENST00000412104 ADD2P35612 726 aa29.1■■■□□ 2.25
VRK2-202ENST00000412104 PIH1D3Q9NQM4 214 aaKnown RBP29.1■■■□□ 2.25
VRK2-202ENST00000412104 CTNNA3Q9UI47 895 aa29.1■■■□□ 2.25
VRK2-202ENST00000412104 USP21Q9UK80 565 aa29.1■■■□□ 2.25
VRK2-202ENST00000412104 NHSQ6T4R5 1651 aa29.1■■■□□ 2.25
VRK2-202ENST00000412104 PDCP20941 246 aa29.1■■■□□ 2.25
VRK2-202ENST00000412104 FGD1P98174 961 aa29.1■■■□□ 2.25
VRK2-202ENST00000412104 EXOSC10Q01780 885 aaKnown RBP29.1■■■□□ 2.25
VRK2-202ENST00000412104 GPAA1O43292 621 aa29.09■■■□□ 2.25
VRK2-202ENST00000412104 GADD45BO75293 160 aaPredicted RBP29.09■■■□□ 2.25
VRK2-202ENST00000412104 IGHMBP2P38935 993 aaKnown RBP29.09■■■□□ 2.25
VRK2-202ENST00000412104 SPATA31A6Q5VVP1 1343 aa29.09■■■□□ 2.25
VRK2-202ENST00000412104 CASZ1Q86V15 1759 aa29.09■■■□□ 2.25
VRK2-202ENST00000412104 SLC9C2Q5TAH2 1124 aa29.08■■■□□ 2.25
VRK2-202ENST00000412104 AGXT2Q9BYV1 514 aa29.08■■■□□ 2.25
VRK2-202ENST00000412104 COL4A1P02462 1669 aa29.07■■■□□ 2.24
VRK2-202ENST00000412104 DOCK2Q92608 1830 aa29.07■■■□□ 2.24
VRK2-202ENST00000412104 IDH1O75874 414 aaKnown RBP29.06■■■□□ 2.24
VRK2-202ENST00000412104 IMMTQ16891 758 aaKnown RBP29.06■■■□□ 2.24
VRK2-202ENST00000412104 CDC37L1Q7L3B6 337 aa29.06■■■□□ 2.24
VRK2-202ENST00000412104 SNAP23O00161 211 aa29.06■■■□□ 2.24
VRK2-202ENST00000412104 FGAP02671 866 aa29.06■■■□□ 2.24
VRK2-202ENST00000412104 UBE3CQ15386 1083 aa29.06■■■□□ 2.24
VRK2-202ENST00000412104 PFKFB2O60825 505 aa29.04■■■□□ 2.24
VRK2-202ENST00000412104 SCRN1Q12765 414 aa29.04■■■□□ 2.24
VRK2-202ENST00000412104 ERFEQ4G0M1 354 aa29.04■■■□□ 2.24
VRK2-202ENST00000412104 SPATA5Q8NB90 893 aa29.04■■■□□ 2.24
VRK2-202ENST00000412104 FIBPO43427 364 aa29.04■■■□□ 2.24
VRK2-202ENST00000412104 JAK2O60674 1132 aa29.04■■■□□ 2.24
VRK2-202ENST00000412104 HAND2P61296 217 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms