RNA–Protein interactions for RNA: ENST00000411463.2

R3HCC1-202, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS P5 TSL 5 BASIC

Gene R3HCC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-202ENST00000411463 SMC1BQ8NDV3 1235 aa29.36■■■□□ 2.29
R3HCC1-202ENST00000411463 ZBTB12Q9Y330 459 aaPredicted RBP29.36■■■□□ 2.29
R3HCC1-202ENST00000411463 IRS2Q9Y4H2 1338 aa29.36■■■□□ 2.29
R3HCC1-202ENST00000411463 SRGAP3O43295 1099 aa29.36■■■□□ 2.29
R3HCC1-202ENST00000411463 FSTL1Q12841 308 aa29.36■■■□□ 2.29
R3HCC1-202ENST00000411463 FBXO3Q9UK99 471 aa29.36■■■□□ 2.29
R3HCC1-202ENST00000411463 VIL1P09327 827 aaKnown RBP29.35■■■□□ 2.29
R3HCC1-202ENST00000411463 POTEIP0CG38 1075 aa29.35■■■□□ 2.29
R3HCC1-202ENST00000411463 POTEJP0CG39 1038 aa29.35■■■□□ 2.29
R3HCC1-202ENST00000411463 EAPPQ56P03 285 aaPredicted RBP29.35■■■□□ 2.29
R3HCC1-202ENST00000411463 PDE8BO95263 885 aa29.34■■■□□ 2.29
R3HCC1-202ENST00000411463 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.34■■■□□ 2.29
R3HCC1-202ENST00000411463 DPF2Q92785 391 aa29.34■■■□□ 2.29
R3HCC1-202ENST00000411463 SIL1Q9H173 461 aa29.34■■■□□ 2.29
R3HCC1-202ENST00000411463 COPRSQ9NQ92 184 aa29.34■■■□□ 2.29
R3HCC1-202ENST00000411463 USP17L3A6NCW0 530 aa29.33■■■□□ 2.29
R3HCC1-202ENST00000411463 USP17L4A6NCW7 530 aa29.33■■■□□ 2.29
R3HCC1-202ENST00000411463 CIAO1O76071 339 aa29.33■■■□□ 2.29
R3HCC1-202ENST00000411463 RPS12P25398 132 aaKnown RBP29.33■■■□□ 2.29
R3HCC1-202ENST00000411463 USP17L1Q7RTZ2 530 aa29.33■■■□□ 2.29
R3HCC1-202ENST00000411463 VGLL2Q8N8G2 317 aa29.33■■■□□ 2.29
R3HCC1-202ENST00000411463 ATG9AQ7Z3C6 839 aa29.32■■■□□ 2.28
R3HCC1-202ENST00000411463 ZNF804AQ7Z570 1209 aa29.32■■■□□ 2.28
R3HCC1-202ENST00000411463 LDHDQ86WU2 507 aa29.32■■■□□ 2.28
R3HCC1-202ENST00000411463 CD209Q9NNX6 404 aa29.32■■■□□ 2.28
R3HCC1-202ENST00000411463 ADARB2Q9NS39 739 aaKnown RBP29.32■■■□□ 2.28
R3HCC1-202ENST00000411463 CNOT7Q9UIV1 285 aaKnown RBP29.32■■■□□ 2.28
R3HCC1-202ENST00000411463 PA2G4Q9UQ80 394 aaKnown RBP29.32■■■□□ 2.28
R3HCC1-202ENST00000411463 A0A1B0GUL6 1792 aa29.31■■■□□ 2.28
R3HCC1-202ENST00000411463 MVPQ14764 893 aaKnown RBP29.3■■■□□ 2.28
R3HCC1-202ENST00000411463 CHADLQ6NUI6 762 aa29.3■■■□□ 2.28
R3HCC1-202ENST00000411463 RSBN1LQ6PCB5 846 aaPredicted RBP29.3■■■□□ 2.28
R3HCC1-202ENST00000411463 CLEC11AQ9Y240 323 aa29.3■■■□□ 2.28
R3HCC1-202ENST00000411463 H7C1D1 291 aa29.29■■■□□ 2.28
R3HCC1-202ENST00000411463 USP50Q70EL3 339 aaPredicted RBP29.29■■■□□ 2.28
R3HCC1-202ENST00000411463 MICALL2Q8IY33 904 aa29.29■■■□□ 2.28
R3HCC1-202ENST00000411463 C1orf115Q9H7X2 142 aa29.29■■■□□ 2.28
R3HCC1-202ENST00000411463 IL15P40933 162 aaPredicted RBP29.29■■■□□ 2.28
R3HCC1-202ENST00000411463 STRIP1Q5VSL9 837 aa29.29■■■□□ 2.28
R3HCC1-202ENST00000411463 COG6Q9Y2V7 657 aa29.29■■■□□ 2.28
R3HCC1-202ENST00000411463 SCN9AQ15858 1988 aa29.28■■■□□ 2.28
R3HCC1-202ENST00000411463 PNMA6EA0A0J9YXQ4 647 aa29.28■■■□□ 2.28
R3HCC1-202ENST00000411463 PDE3AQ14432 1141 aa29.28■■■□□ 2.28
R3HCC1-202ENST00000411463 PUM3Q15397 648 aaKnown RBP29.28■■■□□ 2.28
R3HCC1-202ENST00000411463 AGBL3Q8NEM8 1001 aa29.28■■■□□ 2.28
R3HCC1-202ENST00000411463 FBXW7Q969H0 707 aa29.28■■■□□ 2.28
R3HCC1-202ENST00000411463 CEP126Q9P2H0 1117 aa29.28■■■□□ 2.28
R3HCC1-202ENST00000411463 DDX19BQ9UMR2 479 aa29.28■■■□□ 2.28
R3HCC1-202ENST00000411463 SHTN1A0MZ66 631 aa29.27■■■□□ 2.28
R3HCC1-202ENST00000411463 IL1R1P14778 569 aa29.27■■■□□ 2.28
R3HCC1-202ENST00000411463 DACT2Q5SW24 774 aa29.27■■■□□ 2.28
R3HCC1-202ENST00000411463 TTLL5Q6EMB2 1281 aa29.27■■■□□ 2.28
R3HCC1-202ENST00000411463 FAM84BQ96KN1 310 aaPredicted RBP29.27■■■□□ 2.28
R3HCC1-202ENST00000411463 HIBADHP31937 336 aaKnown RBP29.26■■■□□ 2.27
R3HCC1-202ENST00000411463 GYG1P46976 350 aa29.26■■■□□ 2.27
R3HCC1-202ENST00000411463 ATP8B2P98198 1209 aa29.26■■■□□ 2.27
R3HCC1-202ENST00000411463 HSPA6P17066 643 aa29.25■■■□□ 2.27
R3HCC1-202ENST00000411463 FGFR2P21802 821 aa29.25■■■□□ 2.27
R3HCC1-202ENST00000411463 GTF2IP78347 998 aa29.25■■■□□ 2.27
R3HCC1-202ENST00000411463 ZNF609O15014 1411 aa29.25■■■□□ 2.27
R3HCC1-202ENST00000411463 IFIT1P09914 478 aaKnown RBP29.24■■■□□ 2.27
R3HCC1-202ENST00000411463 C20orf194Q5TEA3 1177 aa29.24■■■□□ 2.27
R3HCC1-202ENST00000411463 GMLQ99445 158 aa29.24■■■□□ 2.27
R3HCC1-202ENST00000411463 CAVIN4Q5BKX8 364 aa29.23■■■□□ 2.27
R3HCC1-202ENST00000411463 LPIN2Q92539 896 aa29.23■■■□□ 2.27
R3HCC1-202ENST00000411463 MXD3Q9BW11 206 aa29.23■■■□□ 2.27
R3HCC1-202ENST00000411463 MYO3BQ8WXR4 1341 aa29.23■■■□□ 2.27
R3HCC1-202ENST00000411463 POLA2Q14181 598 aa29.23■■■□□ 2.27
R3HCC1-202ENST00000411463 VPS37DQ86XT2 251 aa29.23■■■□□ 2.27
R3HCC1-202ENST00000411463 SSH3Q8TE77 659 aa29.23■■■□□ 2.27
R3HCC1-202ENST00000411463 CHMP4BQ9H444 224 aaKnown RBP29.23■■■□□ 2.27
R3HCC1-202ENST00000411463 SASH1O94885 1247 aa29.22■■■□□ 2.27
R3HCC1-202ENST00000411463 USP17L8P0C7I0 530 aa29.22■■■□□ 2.27
R3HCC1-202ENST00000411463 SLC5A1P13866 664 aa29.22■■■□□ 2.27
R3HCC1-202ENST00000411463 SAMD7Q7Z3H4 446 aa29.22■■■□□ 2.27
R3HCC1-202ENST00000411463 FBXO33Q7Z6M2 555 aa29.22■■■□□ 2.27
R3HCC1-202ENST00000411463 TDRD7Q8NHU6 1098 aaKnown RBP29.22■■■□□ 2.27
R3HCC1-202ENST00000411463 TRPM4Q8TD43 1214 aa29.22■■■□□ 2.27
R3HCC1-202ENST00000411463 HIRAP54198 1017 aaPredicted RBP29.21■■■□□ 2.27
R3HCC1-202ENST00000411463 ATP2B3Q16720 1220 aa29.21■■■□□ 2.27
R3HCC1-202ENST00000411463 MAP1SQ66K74 1059 aaPredicted RBP29.21■■■□□ 2.27
R3HCC1-202ENST00000411463 ADAMTSL1Q8N6G6 1762 aa29.21■■■□□ 2.27
R3HCC1-202ENST00000411463 ZNF280AP59817 542 aaPredicted RBP29.2■■■□□ 2.26
R3HCC1-202ENST00000411463 TBC1D10BQ4KMP7 808 aaPredicted RBP29.2■■■□□ 2.26
R3HCC1-202ENST00000411463 ZBTB40Q9NUA8 1239 aa29.2■■■□□ 2.26
R3HCC1-202ENST00000411463 G3BP1Q13283 466 aaKnown RBP eCLIP29.19■■■□□ 2.26
R3HCC1-202ENST00000411463 RBM26Q5T8P6 1007 aaKnown RBP29.19■■■□□ 2.26
R3HCC1-202ENST00000411463 CEP85Q6P2H3 762 aa29.19■■■□□ 2.26
R3HCC1-202ENST00000411463 CNTROBQ8N137 903 aa29.19■■■□□ 2.26
R3HCC1-202ENST00000411463 PSME4Q14997 1843 aa29.19■■■□□ 2.26
R3HCC1-202ENST00000411463 EGFRP00533 1210 aa29.18■■■□□ 2.26
R3HCC1-202ENST00000411463 BCAMP50895 628 aa29.18■■■□□ 2.26
R3HCC1-202ENST00000411463 ZC3H15Q8WU90 426 aaKnown RBP29.18■■■□□ 2.26
R3HCC1-202ENST00000411463 TFCP2Q12800 502 aa29.17■■■□□ 2.26
R3HCC1-202ENST00000411463 OGFOD1Q8N543 542 aa29.17■■■□□ 2.26
R3HCC1-202ENST00000411463 ITGBL1O95965 494 aaPredicted RBP29.17■■■□□ 2.26
R3HCC1-202ENST00000411463 KIF4BQ2VIQ3 1234 aa29.17■■■□□ 2.26
R3HCC1-202ENST00000411463 PGAP2Q9UHJ9 254 aa29.17■■■□□ 2.26
R3HCC1-202ENST00000411463 JAG2Q9Y219 1238 aa29.17■■■□□ 2.26
R3HCC1-202ENST00000411463 FAM205AQ6ZU69 1335 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms