RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 SETDB1Q15047 1291 aa6.63□□□□□ -1.35
RNU4-55P-201ENST00000410731 CCER1Q8TC90 406 aaPredicted RBP6.63□□□□□ -1.35
RNU4-55P-201ENST00000410731 LACRTQ9GZZ8 138 aa6.63□□□□□ -1.35
RNU4-55P-201ENST00000410731 TPSG1Q9NRR2 321 aa6.63□□□□□ -1.35
RNU4-55P-201ENST00000410731 DZANK1Q9NVP4 752 aa6.63□□□□□ -1.35
RNU4-55P-201ENST00000410731 FOXD3Q9UJU5 478 aaPredicted RBP6.63□□□□□ -1.35
RNU4-55P-201ENST00000410731 BRPF3Q9ULD4 1205 aa6.63□□□□□ -1.35
RNU4-55P-201ENST00000410731 EREGO14944 169 aa6.62□□□□□ -1.35
RNU4-55P-201ENST00000410731 NDUFB5O43674 189 aa6.62□□□□□ -1.35
RNU4-55P-201ENST00000410731 ACPPP15309 386 aa6.62□□□□□ -1.35
RNU4-55P-201ENST00000410731 PTPRAP18433 802 aa6.62□□□□□ -1.35
RNU4-55P-201ENST00000410731 ADAMTSL4Q6UY14 1074 aa6.62□□□□□ -1.35
RNU4-55P-201ENST00000410731 POP1Q99575 1024 aaKnown RBP6.62□□□□□ -1.35
RNU4-55P-201ENST00000410731 ADAM19Q9H013 955 aa6.62□□□□□ -1.35
RNU4-55P-201ENST00000410731 NFKBIEO00221 500 aa6.61□□□□□ -1.35
RNU4-55P-201ENST00000410731 BRD1O95696 1058 aa6.61□□□□□ -1.35
RNU4-55P-201ENST00000410731 EDN3P14138 238 aa6.61□□□□□ -1.35
RNU4-55P-201ENST00000410731 TMEM102Q8N9M5 508 aaPredicted RBP6.61□□□□□ -1.35
RNU4-55P-201ENST00000410731 GNEQ9Y223 722 aaKnown RBP6.61□□□□□ -1.35
RNU4-55P-201ENST00000410731 AMOTL2Q9Y2J4 779 aa6.61□□□□□ -1.35
RNU4-55P-201ENST00000410731 FAM177BA6PVY3 158 aa6.6□□□□□ -1.35
RNU4-55P-201ENST00000410731 LINC01387J3KSC0 135 aa6.6□□□□□ -1.35
RNU4-55P-201ENST00000410731 PDE2AO00408 941 aaPredicted RBP6.6□□□□□ -1.35
RNU4-55P-201ENST00000410731 EPHA1P21709 976 aa6.6□□□□□ -1.35
RNU4-55P-201ENST00000410731 RSPO4Q2I0M5 234 aaPredicted RBP6.6□□□□□ -1.35
RNU4-55P-201ENST00000410731 NKAPLQ5M9Q1 402 aa6.6□□□□□ -1.35
RNU4-55P-201ENST00000410731 FAM129BQ96TA1 746 aa6.6□□□□□ -1.35
RNU4-55P-201ENST00000410731 SSBP4Q9BWG4 385 aaPredicted RBP6.6□□□□□ -1.35
RNU4-55P-201ENST00000410731 MRPL18Q9H0U6 180 aaKnown RBP6.6□□□□□ -1.35
RNU4-55P-201ENST00000410731 SOWAHDA6NJG2 315 aa6.59□□□□□ -1.35
RNU4-55P-201ENST00000410731 H3BRJ5 948 aa6.59□□□□□ -1.35
RNU4-55P-201ENST00000410731 TM4SF5O14894 197 aa6.59□□□□□ -1.35
RNU4-55P-201ENST00000410731 NOS3P29474 1203 aa6.59□□□□□ -1.35
RNU4-55P-201ENST00000410731 PDE3BQ13370 1112 aa6.59□□□□□ -1.35
RNU4-55P-201ENST00000410731 FAM117BQ6P1L5 589 aa6.59□□□□□ -1.35
RNU4-55P-201ENST00000410731 TXNDC11Q6PKC3 985 aa6.59□□□□□ -1.35
RNU4-55P-201ENST00000410731 GALNT11Q8NCW6 608 aa6.59□□□□□ -1.35
RNU4-55P-201ENST00000410731 WFDC12Q8WWY7 111 aa6.59□□□□□ -1.35
RNU4-55P-201ENST00000410731 HHIPQ96QV1 700 aa6.59□□□□□ -1.35
RNU4-55P-201ENST00000410731 CITED4Q96RK1 184 aa6.59□□□□□ -1.35
RNU4-55P-201ENST00000410731 OSMRQ99650 979 aa6.59□□□□□ -1.35
RNU4-55P-201ENST00000410731 ZKSCAN3Q9BRR0 538 aa6.59□□□□□ -1.35
RNU4-55P-201ENST00000410731 ZFYVE28Q9HCC9 887 aa6.59□□□□□ -1.35
RNU4-55P-201ENST00000410731 SH2B1Q9NRF2 756 aaPredicted RBP6.59□□□□□ -1.35
RNU4-55P-201ENST00000410731 FSCN2O14926 492 aa6.58□□□□□ -1.36
RNU4-55P-201ENST00000410731 TMEM130Q8N3G9 435 aa6.58□□□□□ -1.36
RNU4-55P-201ENST00000410731 KLHL23Q8NBE8 558 aa6.58□□□□□ -1.36
RNU4-55P-201ENST00000410731 WNT8BQ93098 351 aa6.58□□□□□ -1.36
RNU4-55P-201ENST00000410731 AKTIPQ9H8T0 292 aa6.58□□□□□ -1.36
RNU4-55P-201ENST00000410731 SOX13Q9UN79 622 aa6.58□□□□□ -1.36
RNU4-55P-201ENST00000410731 F8W735 103 aaPredicted RBP6.57□□□□□ -1.36
RNU4-55P-201ENST00000410731 DYRK3O43781 588 aa6.57□□□□□ -1.36
RNU4-55P-201ENST00000410731 TRPA1O75762 1119 aa6.57□□□□□ -1.36
RNU4-55P-201ENST00000410731 NEFLP07196 543 aa6.57□□□□□ -1.36
RNU4-55P-201ENST00000410731 IREB2P48200 963 aaKnown RBP6.57□□□□□ -1.36
RNU4-55P-201ENST00000410731 CABP4P57796 275 aa6.57□□□□□ -1.36
RNU4-55P-201ENST00000410731 PIP4K2BP78356 416 aa6.57□□□□□ -1.36
RNU4-55P-201ENST00000410731 FOXD4L6Q3SYB3 417 aaPredicted RBP6.57□□□□□ -1.36
RNU4-55P-201ENST00000410731 PEAR1Q5VY43 1037 aaPredicted RBP6.57□□□□□ -1.36
RNU4-55P-201ENST00000410731 FOXD4L3Q6VB84 417 aaPredicted RBP6.57□□□□□ -1.36
RNU4-55P-201ENST00000410731 Q6ZS46 218 aa6.57□□□□□ -1.36
RNU4-55P-201ENST00000410731 NXPE3Q969Y0 559 aa6.57□□□□□ -1.36
RNU4-55P-201ENST00000410731 BHLHE41Q9C0J9 482 aaPredicted RBP6.57□□□□□ -1.36
RNU4-55P-201ENST00000410731 SEMA6BQ9H3T3 888 aa6.57□□□□□ -1.36
RNU4-55P-201ENST00000410731 IGHA2P01877 340 aa6.56□□□□□ -1.36
RNU4-55P-201ENST00000410731 H2AFB1P0C5Y9 115 aa6.56□□□□□ -1.36
RNU4-55P-201ENST00000410731 H2AFB2P0C5Z0 115 aa6.56□□□□□ -1.36
RNU4-55P-201ENST00000410731 ITGB7P26010 798 aa6.56□□□□□ -1.36
RNU4-55P-201ENST00000410731 CDC25BP30305 580 aa6.56□□□□□ -1.36
RNU4-55P-201ENST00000410731 CD68P34810 354 aaPredicted RBP6.56□□□□□ -1.36
RNU4-55P-201ENST00000410731 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.56□□□□□ -1.36
RNU4-55P-201ENST00000410731 GALNT12Q8IXK2 581 aa6.56□□□□□ -1.36
RNU4-55P-201ENST00000410731 BSNDQ8WZ55 320 aa6.56□□□□□ -1.36
RNU4-55P-201ENST00000410731 MEGF10Q96KG7 1140 aa6.56□□□□□ -1.36
RNU4-55P-201ENST00000410731 CARD10Q9BWT7 1032 aa6.56□□□□□ -1.36
RNU4-55P-201ENST00000410731 SEC31BQ9NQW1 1179 aa6.56□□□□□ -1.36
RNU4-55P-201ENST00000410731 LATS2Q9NRM7 1088 aa6.56□□□□□ -1.36
RNU4-55P-201ENST00000410731 GPR182O15218 404 aa6.55□□□□□ -1.36
RNU4-55P-201ENST00000410731 TP53INP1Q96A56 240 aa6.55□□□□□ -1.36
RNU4-55P-201ENST00000410731 RBCK1Q9BYM8 510 aa6.55□□□□□ -1.36
RNU4-55P-201ENST00000410731 OSGEPQ9NPF4 335 aa6.55□□□□□ -1.36
RNU4-55P-201ENST00000410731 WISP1O95388 367 aa6.54□□□□□ -1.36
RNU4-55P-201ENST00000410731 POLR3DP05423 398 aaPredicted RBP6.54□□□□□ -1.36
RNU4-55P-201ENST00000410731 VN1R5Q7Z5H4 357 aa6.54□□□□□ -1.36
RNU4-55P-201ENST00000410731 DZIP1LQ8IYY4 767 aaKnown RBP6.54□□□□□ -1.36
RNU4-55P-201ENST00000410731 FOXD4L4Q8WXT5 416 aaPredicted RBP6.54□□□□□ -1.36
RNU4-55P-201ENST00000410731 ALKBH8Q96BT7 664 aaKnown RBP6.54□□□□□ -1.36
RNU4-55P-201ENST00000410731 DMRTB1Q96MA1 342 aa6.54□□□□□ -1.36
RNU4-55P-201ENST00000410731 KCNK4Q9NYG8 393 aa6.54□□□□□ -1.36
RNU4-55P-201ENST00000410731 A0A1W2PP55 124 aa6.53□□□□□ -1.36
RNU4-55P-201ENST00000410731 ADAM11O75078 769 aa6.53□□□□□ -1.36
RNU4-55P-201ENST00000410731 CPNE3O75131 537 aaKnown RBP6.53□□□□□ -1.36
RNU4-55P-201ENST00000410731 ALX3O95076 343 aa6.53□□□□□ -1.36
RNU4-55P-201ENST00000410731 KCNA1Q09470 495 aa6.53□□□□□ -1.36
RNU4-55P-201ENST00000410731 ORC1Q13415 861 aa6.53□□□□□ -1.36
RNU4-55P-201ENST00000410731 USPL1Q5W0Q7 1092 aa6.53□□□□□ -1.36
RNU4-55P-201ENST00000410731 ACAD11Q709F0 780 aa6.53□□□□□ -1.36
RNU4-55P-201ENST00000410731 AGGF1Q8N302 714 aaeCLIP6.53□□□□□ -1.36
RNU4-55P-201ENST00000410731 KLHDC7BQ96G42 594 aa6.53□□□□□ -1.36
RNU4-55P-201ENST00000410731 DNAJC25Q9H1X3 360 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms