RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 METTL22Q9BUU2 404 aaPredicted RBP4.69□□□□□ -1.66
RNU6-1140P-201ENST00000410517 KLK14Q9P0G3 267 aa4.69□□□□□ -1.66
RNU6-1140P-201ENST00000410517 JAG2Q9Y219 1238 aa4.69□□□□□ -1.66
RNU6-1140P-201ENST00000410517 TM4SF5O14894 197 aa4.68□□□□□ -1.66
RNU6-1140P-201ENST00000410517 MMP20O60882 483 aa4.68□□□□□ -1.66
RNU6-1140P-201ENST00000410517 ADAM11O75078 769 aa4.68□□□□□ -1.66
RNU6-1140P-201ENST00000410517 CFPP27918 469 aa4.68□□□□□ -1.66
RNU6-1140P-201ENST00000410517 CDC27P30260 824 aa4.68□□□□□ -1.66
RNU6-1140P-201ENST00000410517 ZNF792Q3KQV3 632 aa4.68□□□□□ -1.66
RNU6-1140P-201ENST00000410517 FAM117BQ6P1L5 589 aa4.68□□□□□ -1.66
RNU6-1140P-201ENST00000410517 LCNL1Q6ZST4 164 aa4.68□□□□□ -1.66
RNU6-1140P-201ENST00000410517 STAG2Q8N3U4 1231 aa4.68□□□□□ -1.66
RNU6-1140P-201ENST00000410517 KLHL23Q8NBE8 558 aa4.68□□□□□ -1.66
RNU6-1140P-201ENST00000410517 POM121Q96HA1 1249 aa4.68□□□□□ -1.66
RNU6-1140P-201ENST00000410517 ZNF777Q9ULD5 760 aaPredicted RBP4.68□□□□□ -1.66
RNU6-1140P-201ENST00000410517 USP20Q9Y2K6 914 aa4.68□□□□□ -1.66
RNU6-1140P-201ENST00000410517 ARID3CA6NKF2 412 aa4.67□□□□□ -1.66
RNU6-1140P-201ENST00000410517 XYLBO75191 536 aa4.67□□□□□ -1.66
RNU6-1140P-201ENST00000410517 PDIA4P13667 645 aaKnown RBP4.67□□□□□ -1.66
RNU6-1140P-201ENST00000410517 NFKBIBQ15653 356 aa4.67□□□□□ -1.66
RNU6-1140P-201ENST00000410517 ZSCAN18Q8TBC5 510 aaPredicted RBP4.67□□□□□ -1.66
RNU6-1140P-201ENST00000410517 TMEM40Q8WWA1 233 aa4.67□□□□□ -1.66
RNU6-1140P-201ENST00000410517 GLMNQ92990 594 aa4.67□□□□□ -1.66
RNU6-1140P-201ENST00000410517 KLHDC7BQ96G42 594 aa4.67□□□□□ -1.66
RNU6-1140P-201ENST00000410517 FAM84AQ96KN4 292 aa4.67□□□□□ -1.66
RNU6-1140P-201ENST00000410517 RNF208Q9H0X6 261 aa4.67□□□□□ -1.66
RNU6-1140P-201ENST00000410517 USP17L5A8MUK1 530 aa4.66□□□□□ -1.66
RNU6-1140P-201ENST00000410517 M0R2N6 131 aa4.66□□□□□ -1.66
RNU6-1140P-201ENST00000410517 MICAL2O94851 1124 aa4.66□□□□□ -1.66
RNU6-1140P-201ENST00000410517 RASA1P20936 1047 aa4.66□□□□□ -1.66
RNU6-1140P-201ENST00000410517 RAP1GAPP47736 663 aa4.66□□□□□ -1.66
RNU6-1140P-201ENST00000410517 ATP1A2P50993 1020 aa4.66□□□□□ -1.66
RNU6-1140P-201ENST00000410517 CEP135Q66GS9 1140 aa4.66□□□□□ -1.66
RNU6-1140P-201ENST00000410517 CILP2Q8IUL8 1156 aa4.66□□□□□ -1.66
RNU6-1140P-201ENST00000410517 RUSC1Q9BVN2 902 aa4.66□□□□□ -1.66
RNU6-1140P-201ENST00000410517 LMCD1Q9NZU5 365 aa4.66□□□□□ -1.66
RNU6-1140P-201ENST00000410517 RTCBQ9Y3I0 505 aaKnown RBP4.66□□□□□ -1.66
RNU6-1140P-201ENST00000410517 FAM95CA0A1B0GW59 222 aa4.65□□□□□ -1.67
RNU6-1140P-201ENST00000410517 CLDN10P78369 228 aa4.65□□□□□ -1.67
RNU6-1140P-201ENST00000410517 MESP2Q0VG99 397 aa4.65□□□□□ -1.67
RNU6-1140P-201ENST00000410517 PAOXQ6QHF9 649 aa4.65□□□□□ -1.67
RNU6-1140P-201ENST00000410517 TTLL10Q6ZVT0 673 aa4.65□□□□□ -1.67
RNU6-1140P-201ENST00000410517 ATG4DQ86TL0 474 aaPredicted RBP4.65□□□□□ -1.67
RNU6-1140P-201ENST00000410517 LRRC56Q8IYG6 542 aaPredicted RBP4.65□□□□□ -1.67
RNU6-1140P-201ENST00000410517 CMTR1Q8N1G2 835 aaKnown RBP4.65□□□□□ -1.67
RNU6-1140P-201ENST00000410517 NFATC2IPQ8NCF5 419 aa4.65□□□□□ -1.67
RNU6-1140P-201ENST00000410517 GAS2L2Q8NHY3 880 aa4.65□□□□□ -1.67
RNU6-1140P-201ENST00000410517 LRRC4CQ9HCJ2 640 aa4.65□□□□□ -1.67
RNU6-1140P-201ENST00000410517 SLC5A6Q9Y289 635 aa4.65□□□□□ -1.67
RNU6-1140P-201ENST00000410517 SMNDC1O75940 238 aaKnown RBP eCLIP4.64□□□□□ -1.67
RNU6-1140P-201ENST00000410517 EGFRP00533 1210 aa4.64□□□□□ -1.67
RNU6-1140P-201ENST00000410517 ZSCAN22P10073 491 aaPredicted RBP4.64□□□□□ -1.67
RNU6-1140P-201ENST00000410517 HOXD8P13378 290 aaPredicted RBP4.64□□□□□ -1.67
RNU6-1140P-201ENST00000410517 SOX18P35713 384 aa4.64□□□□□ -1.67
RNU6-1140P-201ENST00000410517 ATP11AP98196 1134 aa4.64□□□□□ -1.67
RNU6-1140P-201ENST00000410517 DGKZQ13574 1117 aa4.64□□□□□ -1.67
RNU6-1140P-201ENST00000410517 ECM1Q16610 540 aa4.64□□□□□ -1.67
RNU6-1140P-201ENST00000410517 B4GALNT3Q6L9W6 998 aa4.64□□□□□ -1.67
RNU6-1140P-201ENST00000410517 ZNF574Q6ZN55 896 aaPredicted RBP4.64□□□□□ -1.67
RNU6-1140P-201ENST00000410517 C1QL4Q86Z23 238 aa4.64□□□□□ -1.67
RNU6-1140P-201ENST00000410517 SIAH1Q8IUQ4 282 aa4.64□□□□□ -1.67
RNU6-1140P-201ENST00000410517 BHLHE22Q8NFJ8 381 aaPredicted RBP4.64□□□□□ -1.67
RNU6-1140P-201ENST00000410517 TBC1D32Q96NH3 1257 aa4.64□□□□□ -1.67
RNU6-1140P-201ENST00000410517 SEC31BQ9NQW1 1179 aa4.64□□□□□ -1.67
RNU6-1140P-201ENST00000410517 ZC3H7BQ9UGR2 993 aaKnown RBP4.64□□□□□ -1.67
RNU6-1140P-201ENST00000410517 RBM19Q9Y4C8 960 aaKnown RBP4.64□□□□□ -1.67
RNU6-1140P-201ENST00000410517 ZBTB7CA1YPR0 619 aa4.63□□□□□ -1.67
RNU6-1140P-201ENST00000410517 FAM170BA6NMN3 283 aa4.63□□□□□ -1.67
RNU6-1140P-201ENST00000410517 ADMP35318 185 aa4.63□□□□□ -1.67
RNU6-1140P-201ENST00000410517 NLRP12P59046 1061 aa4.63□□□□□ -1.67
RNU6-1140P-201ENST00000410517 RGL4Q8IZJ4 473 aa4.63□□□□□ -1.67
RNU6-1140P-201ENST00000410517 C12orf50Q8NA57 414 aaPredicted RBP4.63□□□□□ -1.67
RNU6-1140P-201ENST00000410517 PBXIP1Q96AQ6 731 aa4.63□□□□□ -1.67
RNU6-1140P-201ENST00000410517 SH2B1Q9NRF2 756 aaPredicted RBP4.63□□□□□ -1.67
RNU6-1140P-201ENST00000410517 PALM3A6NDB9 673 aaPredicted RBP4.62□□□□□ -1.67
RNU6-1140P-201ENST00000410517 LRRC10BA6NIK2 292 aa4.62□□□□□ -1.67
RNU6-1140P-201ENST00000410517 OPLAHO14841 1288 aa4.62□□□□□ -1.67
RNU6-1140P-201ENST00000410517 EPHA1P21709 976 aa4.62□□□□□ -1.67
RNU6-1140P-201ENST00000410517 HDGFL1Q5TGJ6 251 aa4.62□□□□□ -1.67
RNU6-1140P-201ENST00000410517 DUSP27Q5VZP5 1158 aa4.62□□□□□ -1.67
RNU6-1140P-201ENST00000410517 SPRED2Q7Z698 418 aa4.62□□□□□ -1.67
RNU6-1140P-201ENST00000410517 ZAR1Q86SH2 424 aa4.62□□□□□ -1.67
RNU6-1140P-201ENST00000410517 LARGE2Q8N3Y3 721 aa4.62□□□□□ -1.67
RNU6-1140P-201ENST00000410517 OGFOD1Q8N543 542 aa4.62□□□□□ -1.67
RNU6-1140P-201ENST00000410517 GLIS3Q8NEA6 775 aa4.62□□□□□ -1.67
RNU6-1140P-201ENST00000410517 BCL7CQ8WUZ0 217 aaPredicted RBP4.62□□□□□ -1.67
RNU6-1140P-201ENST00000410517 SPACA7Q96KW9 195 aa4.62□□□□□ -1.67
RNU6-1140P-201ENST00000410517 RC3H2Q9HBD1 1191 aaKnown RBP4.62□□□□□ -1.67
RNU6-1140P-201ENST00000410517 FAM177BA6PVY3 158 aa4.61□□□□□ -1.67
RNU6-1140P-201ENST00000410517 USP11P51784 963 aa4.61□□□□□ -1.67
RNU6-1140P-201ENST00000410517 NUTM2GQ5VZR2 741 aa4.61□□□□□ -1.67
RNU6-1140P-201ENST00000410517 ADAMTSL4Q6UY14 1074 aa4.61□□□□□ -1.67
RNU6-1140P-201ENST00000410517 FBLIM1Q8WUP2 373 aa4.61□□□□□ -1.67
RNU6-1140P-201ENST00000410517 ZNF594Q96JF6 807 aaPredicted RBP4.61□□□□□ -1.67
RNU6-1140P-201ENST00000410517 CSRNP1Q96S65 589 aa4.61□□□□□ -1.67
RNU6-1140P-201ENST00000410517 RAPGEFL1Q9UHV5 662 aa4.61□□□□□ -1.67
RNU6-1140P-201ENST00000410517 USTQ9Y2C2 406 aa4.61□□□□□ -1.67
RNU6-1140P-201ENST00000410517 ANKLE2Q86XL3 938 aa4.6□□□□□ -1.67
RNU6-1140P-201ENST00000410517 ADAM19Q9H013 955 aa4.6□□□□□ -1.67
RNU6-1140P-201ENST00000410517 RASSF4Q9H2L5 321 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms