RNA–Protein interactions for RNA: ENST00000409889.1

CCDC148-203, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best) BASIC

Gene CCDC148, Length 1,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-203ENST00000409889 RTL5Q5HYW3 569 aaPredicted RBP13.87□□□□□ -0.19
CCDC148-203ENST00000409889 TMEM106CQ9BVX2 250 aa13.87□□□□□ -0.19
CCDC148-203ENST00000409889 LAMA3Q16787 3333 aa13.87□□□□□ -0.19
CCDC148-203ENST00000409889 USP17L3A6NCW0 530 aa13.86□□□□□ -0.19
CCDC148-203ENST00000409889 USP17L4A6NCW7 530 aa13.86□□□□□ -0.19
CCDC148-203ENST00000409889 H0YGN5 161 aa13.86□□□□□ -0.19
CCDC148-203ENST00000409889 WNT10BO00744 389 aa13.86□□□□□ -0.19
CCDC148-203ENST00000409889 NFE2L2Q16236 605 aa13.86□□□□□ -0.19
CCDC148-203ENST00000409889 USP17L1Q7RTZ2 530 aa13.86□□□□□ -0.19
CCDC148-203ENST00000409889 SLC17A8Q8NDX2 589 aa13.86□□□□□ -0.19
CCDC148-203ENST00000409889 OTUD5Q96G74 571 aa13.86□□□□□ -0.19
CCDC148-203ENST00000409889 EFCC1Q9HA90 598 aa13.86□□□□□ -0.19
CCDC148-203ENST00000409889 ANGEL1Q9UNK9 670 aaKnown RBP13.86□□□□□ -0.19
CCDC148-203ENST00000409889 SPEF2Q9C093 1822 aa13.85□□□□□ -0.19
CCDC148-203ENST00000409889 IGF2BP3O00425 579 aaKnown RBP eCLIP13.85□□□□□ -0.19
CCDC148-203ENST00000409889 INHBEP58166 350 aa13.85□□□□□ -0.19
CCDC148-203ENST00000409889 LDLRAD1Q5T700 205 aa13.85□□□□□ -0.19
CCDC148-203ENST00000409889 ZNF333Q96JL9 665 aa13.85□□□□□ -0.19
CCDC148-203ENST00000409889 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.85□□□□□ -0.19
CCDC148-203ENST00000409889 FZD1Q9UP38 647 aa13.85□□□□□ -0.19
CCDC148-203ENST00000409889 ATP5J2-PTCD1G3V325 749 aa13.84□□□□□ -0.19
CCDC148-203ENST00000409889 IRS4O14654 1257 aaPredicted RBP13.84□□□□□ -0.19
CCDC148-203ENST00000409889 SASH1O94885 1247 aa13.84□□□□□ -0.19
CCDC148-203ENST00000409889 ZBTB48P10074 688 aaPredicted RBP13.84□□□□□ -0.19
CCDC148-203ENST00000409889 CHRDL2Q6WN34 429 aa13.84□□□□□ -0.19
CCDC148-203ENST00000409889 PODNQ7Z5L7 613 aa13.84□□□□□ -0.19
CCDC148-203ENST00000409889 OGFOD1Q8N543 542 aa13.84□□□□□ -0.19
CCDC148-203ENST00000409889 ISCA1Q9BUE6 129 aa13.84□□□□□ -0.19
CCDC148-203ENST00000409889 SEC31BQ9NQW1 1179 aa13.84□□□□□ -0.19
CCDC148-203ENST00000409889 ECM29Q5VYK3 1845 aa13.84□□□□□ -0.19
CCDC148-203ENST00000409889 COL1A1P02452 1464 aaPredicted RBP13.83□□□□□ -0.2
CCDC148-203ENST00000409889 CRHR2Q13324 411 aa13.83□□□□□ -0.2
CCDC148-203ENST00000409889 APOBEC3FQ8IUX4 373 aaKnown RBP13.83□□□□□ -0.2
CCDC148-203ENST00000409889 PLEKHF1Q96S99 279 aa13.83□□□□□ -0.2
CCDC148-203ENST00000409889 MXD3Q9BW11 206 aa13.83□□□□□ -0.2
CCDC148-203ENST00000409889 PCGF6Q9BYE7 350 aa13.83□□□□□ -0.2
CCDC148-203ENST00000409889 XDHP47989 1333 aa13.83□□□□□ -0.2
CCDC148-203ENST00000409889 CAP1Q01518 475 aa13.82□□□□□ -0.2
CCDC148-203ENST00000409889 SP3Q02447 781 aa13.82□□□□□ -0.2
CCDC148-203ENST00000409889 SLC4A8Q2Y0W8 1093 aa13.82□□□□□ -0.2
CCDC148-203ENST00000409889 SLC9C1Q4G0N8 1177 aa13.82□□□□□ -0.2
CCDC148-203ENST00000409889 PLBD2Q8NHP8 589 aa13.82□□□□□ -0.2
CCDC148-203ENST00000409889 FBXW7Q969H0 707 aa13.82□□□□□ -0.2
CCDC148-203ENST00000409889 SLC10A4Q96EP9 437 aa13.82□□□□□ -0.2
CCDC148-203ENST00000409889 WNK4Q96J92 1243 aa13.82□□□□□ -0.2
CCDC148-203ENST00000409889 CHPF2Q9P2E5 772 aa13.82□□□□□ -0.2
CCDC148-203ENST00000409889 RBM27Q9P2N5 1060 aaKnown RBP13.82□□□□□ -0.2
CCDC148-203ENST00000409889 OTOFQ9HC10 1997 aa13.82□□□□□ -0.2
CCDC148-203ENST00000409889 UNC80Q8N2C7 3258 aa13.81□□□□□ -0.2
CCDC148-203ENST00000409889 SSC5DA1L4H1 1573 aa13.81□□□□□ -0.2
CCDC148-203ENST00000409889 TRIM26Q12899 539 aaPredicted RBP13.81□□□□□ -0.2
CCDC148-203ENST00000409889 DACT2Q5SW24 774 aa13.81□□□□□ -0.2
CCDC148-203ENST00000409889 ANKRD13DQ6ZTN6 518 aa13.81□□□□□ -0.2
CCDC148-203ENST00000409889 CLMNQ96JQ2 1002 aa13.81□□□□□ -0.2
CCDC148-203ENST00000409889 MYO3BQ8WXR4 1341 aa13.81□□□□□ -0.2
CCDC148-203ENST00000409889 MAPK8IP3Q9UPT6 1336 aa13.81□□□□□ -0.2
CCDC148-203ENST00000409889 OTUD7BQ6GQQ9 843 aa13.8□□□□□ -0.2
CCDC148-203ENST00000409889 POTEHQ6S545 545 aa13.8□□□□□ -0.2
CCDC148-203ENST00000409889 NBPF11Q86T75 865 aa13.8□□□□□ -0.2
CCDC148-203ENST00000409889 PTCH2Q9Y6C5 1203 aa13.8□□□□□ -0.2
CCDC148-203ENST00000409889 ZSWIM8A7E2V4 1837 aa13.8□□□□□ -0.2
CCDC148-203ENST00000409889 MED23Q9ULK4 1368 aa13.8□□□□□ -0.2
CCDC148-203ENST00000409889 MYCP01106 439 aaPredicted RBP13.79□□□□□ -0.2
CCDC148-203ENST00000409889 ATP2B4P23634 1241 aa13.79□□□□□ -0.2
CCDC148-203ENST00000409889 MAP3K11Q16584 847 aa13.79□□□□□ -0.2
CCDC148-203ENST00000409889 CCDC152Q4G0S7 254 aa13.79□□□□□ -0.2
CCDC148-203ENST00000409889 BABAM1Q9NWV8 329 aa13.79□□□□□ -0.2
CCDC148-203ENST00000409889 MYH3P11055 1940 aa13.78□□□□□ -0.2
CCDC148-203ENST00000409889 KRT24Q2M2I5 525 aa13.78□□□□□ -0.2
CCDC148-203ENST00000409889 STRIP1Q5VSL9 837 aa13.78□□□□□ -0.2
CCDC148-203ENST00000409889 CCDC85AQ96PX6 553 aaPredicted RBP13.78□□□□□ -0.2
CCDC148-203ENST00000409889 WTIPA6NIX2 430 aaPredicted RBP13.77□□□□□ -0.21
CCDC148-203ENST00000409889 PPP1R12BO60237 982 aaPredicted RBP13.77□□□□□ -0.21
CCDC148-203ENST00000409889 GJA5P36382 358 aa13.77□□□□□ -0.21
CCDC148-203ENST00000409889 KIAA0825Q8IV33 1275 aa13.77□□□□□ -0.21
CCDC148-203ENST00000409889 ANKRD18AQ8IVF6 992 aa13.77□□□□□ -0.21
CCDC148-203ENST00000409889 ZBTB38Q8NAP3 1195 aaPredicted RBP13.77□□□□□ -0.21
CCDC148-203ENST00000409889 PTPN18Q99952 460 aa13.77□□□□□ -0.21
CCDC148-203ENST00000409889 DEFB129Q9H1M3 183 aa13.77□□□□□ -0.21
CCDC148-203ENST00000409889 HSP90B1P14625 803 aaKnown RBP13.76□□□□□ -0.21
CCDC148-203ENST00000409889 MMP14P50281 582 aa13.76□□□□□ -0.21
CCDC148-203ENST00000409889 TRIM28Q13263 835 aaKnown RBP13.76□□□□□ -0.21
CCDC148-203ENST00000409889 HDGFL1Q5TGJ6 251 aa13.76□□□□□ -0.21
CCDC148-203ENST00000409889 DPF3Q92784 378 aa13.76□□□□□ -0.21
CCDC148-203ENST00000409889 UNCXA6NJT0 531 aa13.75□□□□□ -0.21
CCDC148-203ENST00000409889 PDE8AO60658 829 aa13.75□□□□□ -0.21
CCDC148-203ENST00000409889 RIPK4P57078 832 aa13.75□□□□□ -0.21
CCDC148-203ENST00000409889 ARHGEF6Q15052 776 aa13.75□□□□□ -0.21
CCDC148-203ENST00000409889 SH3TC2Q8TF17 1288 aa13.75□□□□□ -0.21
CCDC148-203ENST00000409889 ZBED3Q96IU2 234 aaPredicted RBP13.75□□□□□ -0.21
CCDC148-203ENST00000409889 PNNQ9H307 717 aaKnown RBP13.75□□□□□ -0.21
CCDC148-203ENST00000409889 TESPA1A2RU30 521 aaPredicted RBP13.74□□□□□ -0.21
CCDC148-203ENST00000409889 COA1Q9GZY4 146 aa13.74□□□□□ -0.21
CCDC148-203ENST00000409889 DBF4Q9UBU7 674 aaPredicted RBP13.74□□□□□ -0.21
CCDC148-203ENST00000409889 PPP2R3BQ9Y5P8 575 aa13.74□□□□□ -0.21
CCDC148-203ENST00000409889 IREB2P48200 963 aaKnown RBP13.73□□□□□ -0.21
CCDC148-203ENST00000409889 MNX1P50219 401 aaPredicted RBP13.73□□□□□ -0.21
CCDC148-203ENST00000409889 CCT4P50991 539 aaKnown RBP13.73□□□□□ -0.21
CCDC148-203ENST00000409889 TTLL5Q6EMB2 1281 aa13.73□□□□□ -0.21
CCDC148-203ENST00000409889 SHISA4Q96DD7 197 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms