RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 HDAC9Q9UKV0 1011 aa21.84■■□□□ 1.09
SCRN1-203ENST00000409570 CTSWP56202 376 aa21.83■■□□□ 1.09
SCRN1-203ENST00000409570 C8orf58Q8NAV2 365 aa21.83■■□□□ 1.09
SCRN1-203ENST00000409570 CDC5LQ99459 802 aaKnown RBP21.83■■□□□ 1.09
SCRN1-203ENST00000409570 MINPP1Q9UNW1 487 aa21.83■■□□□ 1.09
SCRN1-203ENST00000409570 WNT10BO00744 389 aa21.82■■□□□ 1.08
SCRN1-203ENST00000409570 GNAI1P63096 354 aa21.82■■□□□ 1.08
SCRN1-203ENST00000409570 TTLL12Q14166 644 aaPredicted RBP21.82■■□□□ 1.08
SCRN1-203ENST00000409570 TTLL11Q8NHH1 800 aa21.82■■□□□ 1.08
SCRN1-203ENST00000409570 BSDC1Q9NW68 430 aaPredicted RBP21.82■■□□□ 1.08
SCRN1-203ENST00000409570 GPR25O00155 361 aa21.81■■□□□ 1.08
SCRN1-203ENST00000409570 DDX58O95786 925 aaKnown RBP21.81■■□□□ 1.08
SCRN1-203ENST00000409570 NOM1Q5C9Z4 860 aaKnown RBP21.81■■□□□ 1.08
SCRN1-203ENST00000409570 MAP3K2Q9Y2U5 619 aa21.81■■□□□ 1.08
SCRN1-203ENST00000409570 IGKV5-2P06315 115 aa21.8■■□□□ 1.08
SCRN1-203ENST00000409570 CCT4P50991 539 aaKnown RBP21.8■■□□□ 1.08
SCRN1-203ENST00000409570 MKRN3Q13064 507 aaKnown RBP21.8■■□□□ 1.08
SCRN1-203ENST00000409570 DDX10Q13206 875 aaKnown RBP21.8■■□□□ 1.08
SCRN1-203ENST00000409570 STRIP1Q5VSL9 837 aa21.8■■□□□ 1.08
SCRN1-203ENST00000409570 GREM2Q9H772 168 aa21.8■■□□□ 1.08
SCRN1-203ENST00000409570 ECM29Q5VYK3 1845 aa21.8■■□□□ 1.08
SCRN1-203ENST00000409570 MYO3BQ8WXR4 1341 aa21.8■■□□□ 1.08
SCRN1-203ENST00000409570 PTPN12Q05209 780 aaKnown RBP21.79■■□□□ 1.08
SCRN1-203ENST00000409570 TXNRD3Q86VQ6 643 aa21.79■■□□□ 1.08
SCRN1-203ENST00000409570 OGFOD1Q8N543 542 aa21.79■■□□□ 1.08
SCRN1-203ENST00000409570 FBXW7Q969H0 707 aa21.79■■□□□ 1.08
SCRN1-203ENST00000409570 LAMB1P07942 1786 aa21.79■■□□□ 1.08
SCRN1-203ENST00000409570 APAF1O14727 1248 aa21.78■■□□□ 1.08
SCRN1-203ENST00000409570 SASH1O94885 1247 aa21.78■■□□□ 1.08
SCRN1-203ENST00000409570 NF2P35240 595 aa21.78■■□□□ 1.08
SCRN1-203ENST00000409570 CCDC30Q5VVM6 783 aa21.78■■□□□ 1.08
SCRN1-203ENST00000409570 FBXO46Q6PJ61 603 aaPredicted RBP21.78■■□□□ 1.08
SCRN1-203ENST00000409570 COA1Q9GZY4 146 aa21.78■■□□□ 1.08
SCRN1-203ENST00000409570 R3HDMLQ9H3Y0 253 aa21.78■■□□□ 1.08
SCRN1-203ENST00000409570 KSR2Q6VAB6 950 aa21.77■■□□□ 1.08
SCRN1-203ENST00000409570 CFHR5Q9BXR6 569 aa21.77■■□□□ 1.08
SCRN1-203ENST00000409570 PI4KAP2A4QPH2 592 aa21.76■■□□□ 1.07
SCRN1-203ENST00000409570 CALD1Q05682 793 aaKnown RBP21.76■■□□□ 1.07
SCRN1-203ENST00000409570 SREBF2Q12772 1141 aa21.76■■□□□ 1.07
SCRN1-203ENST00000409570 ARMC9Q7Z3E5 817 aa21.76■■□□□ 1.07
SCRN1-203ENST00000409570 TSPYL6Q8N831 410 aa21.76■■□□□ 1.07
SCRN1-203ENST00000409570 PI4KAP1Q8N8J0 262 aa21.76■■□□□ 1.07
SCRN1-203ENST00000409570 ZBED3Q96IU2 234 aaPredicted RBP21.76■■□□□ 1.07
SCRN1-203ENST00000409570 LEMD3Q9Y2U8 911 aa21.76■■□□□ 1.07
SCRN1-203ENST00000409570 HTTP42858 3142 aa21.75■■□□□ 1.07
SCRN1-203ENST00000409570 A0A1B0GUL6 1792 aa21.75■■□□□ 1.07
SCRN1-203ENST00000409570 FKTNO75072 461 aa21.75■■□□□ 1.07
SCRN1-203ENST00000409570 MMP14P50281 582 aa21.75■■□□□ 1.07
SCRN1-203ENST00000409570 PRKG1Q13976 671 aa21.75■■□□□ 1.07
SCRN1-203ENST00000409570 LDLRAD1Q5T700 205 aa21.75■■□□□ 1.07
SCRN1-203ENST00000409570 KLRK1P26718 216 aa21.74■■□□□ 1.07
SCRN1-203ENST00000409570 CWF19L2Q2TBE0 894 aaKnown RBP21.74■■□□□ 1.07
SCRN1-203ENST00000409570 SPRYD7Q5W111 196 aa21.74■■□□□ 1.07
SCRN1-203ENST00000409570 TTLL5Q6EMB2 1281 aa21.74■■□□□ 1.07
SCRN1-203ENST00000409570 APOBEC3FQ8IUX4 373 aaKnown RBP21.74■■□□□ 1.07
SCRN1-203ENST00000409570 KIAA0825Q8IV33 1275 aa21.74■■□□□ 1.07
SCRN1-203ENST00000409570 KIAA0100Q14667 2235 aaKnown RBP21.74■■□□□ 1.07
SCRN1-203ENST00000409570 NEURL1BA8MQ27 555 aa21.73■■□□□ 1.07
SCRN1-203ENST00000409570 CHMP4AQ9BY43 222 aa21.73■■□□□ 1.07
SCRN1-203ENST00000409570 ZNF804BA4D1E1 1349 aa21.73■■□□□ 1.07
SCRN1-203ENST00000409570 MKI67P46013 3256 aaKnown RBP21.72■■□□□ 1.07
SCRN1-203ENST00000409570 CACNA1FO60840 1977 aa21.72■■□□□ 1.07
SCRN1-203ENST00000409570 H7C1W4 665 aa21.72■■□□□ 1.07
SCRN1-203ENST00000409570 IGHMBP2P38935 993 aaKnown RBP21.72■■□□□ 1.07
SCRN1-203ENST00000409570 NEXNQ0ZGT2 675 aa21.72■■□□□ 1.07
SCRN1-203ENST00000409570 ANGEL1Q9UNK9 670 aaKnown RBP21.72■■□□□ 1.07
SCRN1-203ENST00000409570 FZD1Q9UP38 647 aa21.72■■□□□ 1.07
SCRN1-203ENST00000409570 COL1A1P02452 1464 aaPredicted RBP21.71■■□□□ 1.07
SCRN1-203ENST00000409570 GTF2IP78347 998 aa21.71■■□□□ 1.07
SCRN1-203ENST00000409570 UBE3BQ7Z3V4 1068 aa21.71■■□□□ 1.07
SCRN1-203ENST00000409570 CENPFP49454 3210 aa21.71■■□□□ 1.07
SCRN1-203ENST00000409570 RBBP6Q7Z6E9 1792 aaKnown RBP21.7■■□□□ 1.06
SCRN1-203ENST00000409570 PLA2G12BQ9BX93 195 aa21.7■■□□□ 1.06
SCRN1-203ENST00000409570 ANKRD2Q9GZV1 360 aa21.7■■□□□ 1.06
SCRN1-203ENST00000409570 ALDH1A1P00352 501 aa21.69■■□□□ 1.06
SCRN1-203ENST00000409570 ITGA6P23229 1130 aa21.69■■□□□ 1.06
SCRN1-203ENST00000409570 G2E3Q7L622 706 aa21.69■■□□□ 1.06
SCRN1-203ENST00000409570 SSC5DA1L4H1 1573 aa21.69■■□□□ 1.06
SCRN1-203ENST00000409570 MAP3K11Q16584 847 aa21.68■■□□□ 1.06
SCRN1-203ENST00000409570 DEFB129Q9H1M3 183 aa21.68■■□□□ 1.06
SCRN1-203ENST00000409570 PRKRIP1Q9H875 184 aaPredicted RBP21.68■■□□□ 1.06
SCRN1-203ENST00000409570 CD209Q9NNX6 404 aa21.68■■□□□ 1.06
SCRN1-203ENST00000409570 IRS2Q9Y4H2 1338 aa21.67■■□□□ 1.06
SCRN1-203ENST00000409570 MANSC4A6NHS7 340 aaPredicted RBP21.67■■□□□ 1.06
SCRN1-203ENST00000409570 CASP7P55210 303 aa21.67■■□□□ 1.06
SCRN1-203ENST00000409570 IFNL1Q8IU54 200 aa21.67■■□□□ 1.06
SCRN1-203ENST00000409570 CERS5Q8N5B7 392 aa21.67■■□□□ 1.06
SCRN1-203ENST00000409570 TSR2Q969E8 191 aaKnown RBP21.67■■□□□ 1.06
SCRN1-203ENST00000409570 SLC10A4Q96EP9 437 aa21.67■■□□□ 1.06
SCRN1-203ENST00000409570 MPHOSPH8Q99549 860 aa21.67■■□□□ 1.06
SCRN1-203ENST00000409570 STK31Q9BXU1 1019 aa21.67■■□□□ 1.06
SCRN1-203ENST00000409570 CSF1RP07333 972 aa21.66■■□□□ 1.06
SCRN1-203ENST00000409570 INHBEP58166 350 aa21.66■■□□□ 1.06
SCRN1-203ENST00000409570 CHRNDQ07001 517 aa21.66■■□□□ 1.06
SCRN1-203ENST00000409570 GCKRQ14397 625 aa21.66■■□□□ 1.06
SCRN1-203ENST00000409570 DLGAP5Q15398 846 aa21.66■■□□□ 1.06
SCRN1-203ENST00000409570 MTMR14Q8NCE2 650 aa21.66■■□□□ 1.06
SCRN1-203ENST00000409570 WNK4Q96J92 1243 aa21.66■■□□□ 1.06
SCRN1-203ENST00000409570 CLMNQ96JQ2 1002 aa21.66■■□□□ 1.06
SCRN1-203ENST00000409570 TRIM17Q9Y577 477 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms