RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 ANKRD18AQ8IVF6 992 aa16.31■□□□□ 0.2
CHRNA1-205ENST00000409542 CCDC191Q8NCU4 936 aa16.31■□□□□ 0.2
CHRNA1-205ENST00000409542 ZNF296Q8WUU4 475 aaPredicted RBP16.31■□□□□ 0.2
CHRNA1-205ENST00000409542 PITPNM2Q9BZ72 1349 aa16.31■□□□□ 0.2
CHRNA1-205ENST00000409542 ATP2B4P23634 1241 aa16.3■□□□□ 0.2
CHRNA1-205ENST00000409542 FKBP1BP68106 108 aa16.3■□□□□ 0.2
CHRNA1-205ENST00000409542 MKRN3Q13064 507 aaKnown RBP16.3■□□□□ 0.2
CHRNA1-205ENST00000409542 REM2Q8IYK8 340 aaPredicted RBP16.3■□□□□ 0.2
CHRNA1-205ENST00000409542 C8orf58Q8NAV2 365 aa16.3■□□□□ 0.2
CHRNA1-205ENST00000409542 WDR43Q15061 677 aaKnown RBP eCLIP16.29■□□□□ 0.2
CHRNA1-205ENST00000409542 PODNQ7Z5L7 613 aa16.29■□□□□ 0.2
CHRNA1-205ENST00000409542 METTL22Q9BUU2 404 aaPredicted RBP16.29■□□□□ 0.2
CHRNA1-205ENST00000409542 R3HDMLQ9H3Y0 253 aa16.29■□□□□ 0.2
CHRNA1-205ENST00000409542 CWC25Q9NXE8 425 aaPredicted RBP16.29■□□□□ 0.2
CHRNA1-205ENST00000409542 DACT2Q5SW24 774 aa16.29■□□□□ 0.2
CHRNA1-205ENST00000409542 TXNRD3Q86VQ6 643 aa16.29■□□□□ 0.2
CHRNA1-205ENST00000409542 MINPP1Q9UNW1 487 aa16.29■□□□□ 0.2
CHRNA1-205ENST00000409542 SPEF2Q9C093 1822 aa16.28■□□□□ 0.2
CHRNA1-205ENST00000409542 WNT10BO00744 389 aa16.28■□□□□ 0.2
CHRNA1-205ENST00000409542 IGKV5-2P06315 115 aa16.28■□□□□ 0.2
CHRNA1-205ENST00000409542 TM4SF4P48230 202 aa16.28■□□□□ 0.2
CHRNA1-205ENST00000409542 TTLL11Q8NHH1 800 aa16.28■□□□□ 0.2
CHRNA1-205ENST00000409542 HSP90B1P14625 803 aaKnown RBP16.27■□□□□ 0.19
CHRNA1-205ENST00000409542 CTSWP56202 376 aa16.27■□□□□ 0.19
CHRNA1-205ENST00000409542 PTPN12Q05209 780 aaKnown RBP16.27■□□□□ 0.19
CHRNA1-205ENST00000409542 TTLL12Q14166 644 aaPredicted RBP16.27■□□□□ 0.19
CHRNA1-205ENST00000409542 GREM2Q9H772 168 aa16.27■□□□□ 0.19
CHRNA1-205ENST00000409542 HDAC9Q9UKV0 1011 aa16.27■□□□□ 0.19
CHRNA1-205ENST00000409542 FZD1Q9UP38 647 aa16.27■□□□□ 0.19
CHRNA1-205ENST00000409542 MAP3K2Q9Y2U5 619 aa16.27■□□□□ 0.19
CHRNA1-205ENST00000409542 MED23Q9ULK4 1368 aa16.26■□□□□ 0.19
CHRNA1-205ENST00000409542 GPR25O00155 361 aa16.26■□□□□ 0.19
CHRNA1-205ENST00000409542 APAF1O14727 1248 aa16.26■□□□□ 0.19
CHRNA1-205ENST00000409542 SASH1O94885 1247 aa16.26■□□□□ 0.19
CHRNA1-205ENST00000409542 PRKG1Q13976 671 aa16.26■□□□□ 0.19
CHRNA1-205ENST00000409542 PRPF38BQ5VTL8 546 aaKnown RBP16.26■□□□□ 0.19
CHRNA1-205ENST00000409542 TSPYL6Q8N831 410 aa16.26■□□□□ 0.19
CHRNA1-205ENST00000409542 FBXW7Q969H0 707 aa16.26■□□□□ 0.19
CHRNA1-205ENST00000409542 BSDC1Q9NW68 430 aaPredicted RBP16.26■□□□□ 0.19
CHRNA1-205ENST00000409542 IFT57Q9NWB7 429 aa16.26■□□□□ 0.19
CHRNA1-205ENST00000409542 KLRK1P26718 216 aa16.25■□□□□ 0.19
CHRNA1-205ENST00000409542 CCT4P50991 539 aaKnown RBP16.25■□□□□ 0.19
CHRNA1-205ENST00000409542 PKN2Q16513 984 aaKnown RBP16.24■□□□□ 0.19
CHRNA1-205ENST00000409542 CDC5LQ99459 802 aaKnown RBP16.24■□□□□ 0.19
CHRNA1-205ENST00000409542 PI4KAP2A4QPH2 592 aa16.23■□□□□ 0.19
CHRNA1-205ENST00000409542 GNAI1P63096 354 aa16.23■□□□□ 0.19
CHRNA1-205ENST00000409542 CWF19L2Q2TBE0 894 aaKnown RBP16.23■□□□□ 0.19
CHRNA1-205ENST00000409542 STRIP1Q5VSL9 837 aa16.23■□□□□ 0.19
CHRNA1-205ENST00000409542 PI4KAP1Q8N8J0 262 aa16.23■□□□□ 0.19
CHRNA1-205ENST00000409542 HTTP42858 3142 aa16.23■□□□□ 0.19
CHRNA1-205ENST00000409542 MYH3P11055 1940 aa16.23■□□□□ 0.19
CHRNA1-205ENST00000409542 ZBED3Q96IU2 234 aaPredicted RBP16.22■□□□□ 0.19
CHRNA1-205ENST00000409542 PPP4R2Q9NY27 417 aa16.22■□□□□ 0.19
CHRNA1-205ENST00000409542 MKI67P46013 3256 aaKnown RBP16.22■□□□□ 0.19
CHRNA1-205ENST00000409542 DDX58O95786 925 aaKnown RBP16.22■□□□□ 0.19
CHRNA1-205ENST00000409542 TTLL5Q6EMB2 1281 aa16.22■□□□□ 0.19
CHRNA1-205ENST00000409542 FBXO46Q6PJ61 603 aaPredicted RBP16.22■□□□□ 0.19
CHRNA1-205ENST00000409542 KSR2Q6VAB6 950 aa16.22■□□□□ 0.19
CHRNA1-205ENST00000409542 KIAA0825Q8IV33 1275 aa16.22■□□□□ 0.19
CHRNA1-205ENST00000409542 OGFOD1Q8N543 542 aa16.22■□□□□ 0.19
CHRNA1-205ENST00000409542 COA1Q9GZY4 146 aa16.22■□□□□ 0.19
CHRNA1-205ENST00000409542 PCDHAC2Q9Y5I4 1007 aa16.22■□□□□ 0.19
CHRNA1-205ENST00000409542 H7C1W4 665 aa16.21■□□□□ 0.19
CHRNA1-205ENST00000409542 NOM1Q5C9Z4 860 aaKnown RBP16.21■□□□□ 0.19
CHRNA1-205ENST00000409542 LDLRAD1Q5T700 205 aa16.21■□□□□ 0.19
CHRNA1-205ENST00000409542 CCDC30Q5VVM6 783 aa16.21■□□□□ 0.19
CHRNA1-205ENST00000409542 SPRYD7Q5W111 196 aa16.21■□□□□ 0.19
CHRNA1-205ENST00000409542 G2E3Q7L622 706 aa16.21■□□□□ 0.19
CHRNA1-205ENST00000409542 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.21■□□□□ 0.19
CHRNA1-205ENST00000409542 NEURL1BA8MQ27 555 aa16.2■□□□□ 0.18
CHRNA1-205ENST00000409542 SNAP23O00161 211 aa16.2■□□□□ 0.18
CHRNA1-205ENST00000409542 FKTNO75072 461 aa16.2■□□□□ 0.18
CHRNA1-205ENST00000409542 NF2P35240 595 aa16.2■□□□□ 0.18
CHRNA1-205ENST00000409542 GTF2IP78347 998 aa16.2■□□□□ 0.18
CHRNA1-205ENST00000409542 ARMC9Q7Z3E5 817 aa16.2■□□□□ 0.18
CHRNA1-205ENST00000409542 CFHR5Q9BXR6 569 aa16.2■□□□□ 0.18
CHRNA1-205ENST00000409542 ANGEL1Q9UNK9 670 aaKnown RBP16.2■□□□□ 0.18
CHRNA1-205ENST00000409542 ZNF804BA4D1E1 1349 aa16.19■□□□□ 0.18
CHRNA1-205ENST00000409542 MYO3BQ8WXR4 1341 aa16.19■□□□□ 0.18
CHRNA1-205ENST00000409542 SREBF2Q12772 1141 aa16.19■□□□□ 0.18
CHRNA1-205ENST00000409542 UBE3BQ7Z3V4 1068 aa16.19■□□□□ 0.18
CHRNA1-205ENST00000409542 LEMD3Q9Y2U8 911 aa16.19■□□□□ 0.18
CHRNA1-205ENST00000409542 CENPFP49454 3210 aa16.18■□□□□ 0.18
CHRNA1-205ENST00000409542 CERS5Q8N5B7 392 aa16.18■□□□□ 0.18
CHRNA1-205ENST00000409542 TSR2Q969E8 191 aaKnown RBP16.18■□□□□ 0.18
CHRNA1-205ENST00000409542 CLMNQ96JQ2 1002 aa16.18■□□□□ 0.18
CHRNA1-205ENST00000409542 SSC5DA1L4H1 1573 aa16.18■□□□□ 0.18
CHRNA1-205ENST00000409542 AOX1Q06278 1338 aa16.18■□□□□ 0.18
CHRNA1-205ENST00000409542 ITGA6P23229 1130 aa16.17■□□□□ 0.18
CHRNA1-205ENST00000409542 IGHMBP2P38935 993 aaKnown RBP16.17■□□□□ 0.18
CHRNA1-205ENST00000409542 CASP7P55210 303 aa16.17■□□□□ 0.18
CHRNA1-205ENST00000409542 IRX6P78412 446 aaPredicted RBP16.17■□□□□ 0.18
CHRNA1-205ENST00000409542 APOBEC3FQ8IUX4 373 aaKnown RBP16.17■□□□□ 0.18
CHRNA1-205ENST00000409542 IRS2Q9Y4H2 1338 aa16.17■□□□□ 0.18
CHRNA1-205ENST00000409542 CALD1Q05682 793 aaKnown RBP16.16■□□□□ 0.18
CHRNA1-205ENST00000409542 IFNL1Q8IU54 200 aa16.16■□□□□ 0.18
CHRNA1-205ENST00000409542 DEFB129Q9H1M3 183 aa16.16■□□□□ 0.18
CHRNA1-205ENST00000409542 CD209Q9NNX6 404 aa16.16■□□□□ 0.18
CHRNA1-205ENST00000409542 POTEFA5A3E0 1075 aa16.16■□□□□ 0.18
CHRNA1-205ENST00000409542 IGF2BP3O00425 579 aaKnown RBP eCLIP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms