RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 SWT1Q5T5J6 900 aaKnown RBP12.48□□□□□ -0.41
NIF3L1-204ENST00000409357 EXOC4Q96A65 974 aa12.48□□□□□ -0.41
NIF3L1-204ENST00000409357 SRRTQ9BXP5 876 aaKnown RBP12.48□□□□□ -0.41
NIF3L1-204ENST00000409357 FHDC1Q9C0D6 1143 aaPredicted RBP12.48□□□□□ -0.41
NIF3L1-204ENST00000409357 UBR2Q8IWV8 1755 aa12.48□□□□□ -0.41
NIF3L1-204ENST00000409357 CICQ96RK0 1608 aaPredicted RBP12.48□□□□□ -0.41
NIF3L1-204ENST00000409357 A0A1B0GUL7 405 aa12.48□□□□□ -0.41
NIF3L1-204ENST00000409357 RNMTO43148 476 aaKnown RBP12.48□□□□□ -0.41
NIF3L1-204ENST00000409357 PTCD1O75127 700 aaKnown RBP12.48□□□□□ -0.41
NIF3L1-204ENST00000409357 PRKAR2BP31323 418 aa12.48□□□□□ -0.41
NIF3L1-204ENST00000409357 NAA30Q147X3 362 aaPredicted RBP12.48□□□□□ -0.41
NIF3L1-204ENST00000409357 SPC24Q8NBT2 197 aa12.48□□□□□ -0.41
NIF3L1-204ENST00000409357 AK7Q96M32 723 aa12.48□□□□□ -0.41
NIF3L1-204ENST00000409357 ESYT1Q9BSJ8 1104 aa12.48□□□□□ -0.41
NIF3L1-204ENST00000409357 CHMP4AQ9BY43 222 aa12.48□□□□□ -0.41
NIF3L1-204ENST00000409357 HDAC5Q9UQL6 1122 aa12.48□□□□□ -0.41
NIF3L1-204ENST00000409357 MRVI1Q9Y6F6 885 aa12.48□□□□□ -0.41
NIF3L1-204ENST00000409357 KCPQ6ZWJ8 1503 aa12.47□□□□□ -0.41
NIF3L1-204ENST00000409357 C4AP0C0L4 1744 aa12.47□□□□□ -0.41
NIF3L1-204ENST00000409357 STX6O43752 255 aa12.47□□□□□ -0.41
NIF3L1-204ENST00000409357 IVLP07476 585 aa12.47□□□□□ -0.41
NIF3L1-204ENST00000409357 GIMAP6Q6P9H5 292 aa12.47□□□□□ -0.41
NIF3L1-204ENST00000409357 SRLQ86TD4 932 aa12.47□□□□□ -0.41
NIF3L1-204ENST00000409357 LRRC8AQ8IWT6 810 aa12.47□□□□□ -0.41
NIF3L1-204ENST00000409357 SUGP1Q8IWZ8 645 aaKnown RBP12.47□□□□□ -0.41
NIF3L1-204ENST00000409357 CEP120Q8N960 986 aa12.47□□□□□ -0.41
NIF3L1-204ENST00000409357 CACTINQ8WUQ7 758 aaKnown RBP12.47□□□□□ -0.41
NIF3L1-204ENST00000409357 SLC52A2Q9HAB3 445 aa12.47□□□□□ -0.41
NIF3L1-204ENST00000409357 CNPY2Q9Y2B0 182 aa12.47□□□□□ -0.41
NIF3L1-204ENST00000409357 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.46□□□□□ -0.41
NIF3L1-204ENST00000409357 GNPATO15228 680 aa12.46□□□□□ -0.41
NIF3L1-204ENST00000409357 FCHSD2O94868 740 aa12.46□□□□□ -0.41
NIF3L1-204ENST00000409357 TYRO3Q06418 890 aa12.46□□□□□ -0.41
NIF3L1-204ENST00000409357 SLC39A6Q13433 755 aa12.46□□□□□ -0.41
NIF3L1-204ENST00000409357 ELF2Q15723 593 aa12.46□□□□□ -0.41
NIF3L1-204ENST00000409357 SLC16A10Q8TF71 515 aa12.46□□□□□ -0.41
NIF3L1-204ENST00000409357 SYT17Q9BSW7 474 aa12.46□□□□□ -0.41
NIF3L1-204ENST00000409357 DDX19AQ9NUU7 478 aaKnown RBP12.46□□□□□ -0.41
NIF3L1-204ENST00000409357 MAP3K5Q99683 1374 aa12.46□□□□□ -0.42
NIF3L1-204ENST00000409357 ZNF853P0CG23 659 aa12.45□□□□□ -0.42
NIF3L1-204ENST00000409357 MAGEA9P43362 315 aa12.45□□□□□ -0.42
NIF3L1-204ENST00000409357 ZSCAN26Q16670 478 aa12.45□□□□□ -0.42
NIF3L1-204ENST00000409357 SYT10Q6XYQ8 523 aa12.45□□□□□ -0.42
NIF3L1-204ENST00000409357 DLG5Q8TDM6 1919 aa12.45□□□□□ -0.42
NIF3L1-204ENST00000409357 AOX1Q06278 1338 aa12.45□□□□□ -0.42
NIF3L1-204ENST00000409357 CLCN6P51797 869 aa12.45□□□□□ -0.42
NIF3L1-204ENST00000409357 GSDMDP57764 484 aa12.45□□□□□ -0.42
NIF3L1-204ENST00000409357 GNAI1P63096 354 aa12.45□□□□□ -0.42
NIF3L1-204ENST00000409357 LRMPQ12912 555 aa12.45□□□□□ -0.42
NIF3L1-204ENST00000409357 FOXD4L5Q5VV16 416 aaPredicted RBP12.45□□□□□ -0.42
NIF3L1-204ENST00000409357 TMCO3Q6UWJ1 677 aa12.45□□□□□ -0.42
NIF3L1-204ENST00000409357 CCAR2Q8N163 923 aaKnown RBP12.45□□□□□ -0.42
NIF3L1-204ENST00000409357 IL17REQ8NFR9 667 aa12.45□□□□□ -0.42
NIF3L1-204ENST00000409357 FOXD4L4Q8WXT5 416 aaPredicted RBP12.45□□□□□ -0.42
NIF3L1-204ENST00000409357 NUP62CLQ9H1M0 184 aa12.45□□□□□ -0.42
NIF3L1-204ENST00000409357 CBX8Q9HC52 389 aa12.45□□□□□ -0.42
NIF3L1-204ENST00000409357 GDPD2Q9HCC8 539 aa12.45□□□□□ -0.42
NIF3L1-204ENST00000409357 KIF1CO43896 1103 aaKnown RBP12.44□□□□□ -0.42
NIF3L1-204ENST00000409357 CPP00450 1065 aa12.44□□□□□ -0.42
NIF3L1-204ENST00000409357 KRBA2Q6ZNG9 492 aa12.44□□□□□ -0.42
NIF3L1-204ENST00000409357 HOMEZQ8IX15 550 aa12.44□□□□□ -0.42
NIF3L1-204ENST00000409357 IMPACTQ9P2X3 320 aa12.44□□□□□ -0.42
NIF3L1-204ENST00000409357 SALL3Q9BXA9 1300 aa12.44□□□□□ -0.42
NIF3L1-204ENST00000409357 SYT1P21579 422 aa12.43□□□□□ -0.42
NIF3L1-204ENST00000409357 HSPA4P34932 840 aa12.43□□□□□ -0.42
NIF3L1-204ENST00000409357 GSCP56915 257 aaPredicted RBP12.43□□□□□ -0.42
NIF3L1-204ENST00000409357 TRIM5Q9C035 493 aa12.43□□□□□ -0.42
NIF3L1-204ENST00000409357 CLIP2Q9UDT6 1046 aa12.43□□□□□ -0.42
NIF3L1-204ENST00000409357 JRKLQ9Y4A0 524 aa12.43□□□□□ -0.42
NIF3L1-204ENST00000409357 LRRFIP2Q9Y608 721 aaKnown RBP12.43□□□□□ -0.42
NIF3L1-204ENST00000409357 GNAT3A8MTJ3 354 aa12.42□□□□□ -0.42
NIF3L1-204ENST00000409357 CCP110O43303 1012 aa12.42□□□□□ -0.42
NIF3L1-204ENST00000409357 HMMRO75330 724 aa12.42□□□□□ -0.42
NIF3L1-204ENST00000409357 POLD1P28340 1107 aa12.42□□□□□ -0.42
NIF3L1-204ENST00000409357 PDE1AP54750 535 aa12.42□□□□□ -0.42
NIF3L1-204ENST00000409357 CEP85Q6P2H3 762 aa12.42□□□□□ -0.42
NIF3L1-204ENST00000409357 DRC7Q8IY82 874 aa12.42□□□□□ -0.42
NIF3L1-204ENST00000409357 MNS1Q8NEH6 495 aa12.42□□□□□ -0.42
NIF3L1-204ENST00000409357 NLGN2Q8NFZ4 835 aa12.42□□□□□ -0.42
NIF3L1-204ENST00000409357 ZSCAN31Q96LW9 406 aaPredicted RBP12.42□□□□□ -0.42
NIF3L1-204ENST00000409357 TTC14Q96N46 770 aa12.42□□□□□ -0.42
NIF3L1-204ENST00000409357 CEMIPQ8WUJ3 1361 aa12.42□□□□□ -0.42
NIF3L1-204ENST00000409357 CNTNAP4Q9C0A0 1308 aa12.42□□□□□ -0.42
NIF3L1-204ENST00000409357 ATP2B1P20020 1258 aa12.42□□□□□ -0.42
NIF3L1-204ENST00000409357 CCDC158Q5M9N0 1113 aa12.42□□□□□ -0.42
NIF3L1-204ENST00000409357 DNAJC10Q8IXB1 793 aa12.42□□□□□ -0.42
NIF3L1-204ENST00000409357 C16orf71Q8IYS4 520 aaPredicted RBP12.42□□□□□ -0.42
NIF3L1-204ENST00000409357 CEP89Q96ST8 783 aa12.42□□□□□ -0.42
NIF3L1-204ENST00000409357 OSBPL5Q9H0X9 879 aaPredicted RBP12.42□□□□□ -0.42
NIF3L1-204ENST00000409357 C1orf115Q9H7X2 142 aa12.42□□□□□ -0.42
NIF3L1-204ENST00000409357 ST7Q9NRC1 585 aa12.42□□□□□ -0.42
NIF3L1-204ENST00000409357 STAP2Q9UGK3 403 aa12.42□□□□□ -0.42
NIF3L1-204ENST00000409357 LIMCH1Q9UPQ0 1083 aa12.42□□□□□ -0.42
NIF3L1-204ENST00000409357 RRP15Q9Y3B9 282 aaKnown RBP12.42□□□□□ -0.42
NIF3L1-204ENST00000409357 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.42□□□□□ -0.42
NIF3L1-204ENST00000409357 PHLPP2Q6ZVD8 1323 aa12.41□□□□□ -0.42
NIF3L1-204ENST00000409357 ACTN2P35609 894 aa12.41□□□□□ -0.42
NIF3L1-204ENST00000409357 CRKLP46109 303 aaKnown RBP12.41□□□□□ -0.42
NIF3L1-204ENST00000409357 CCZ1BP86790 482 aa12.41□□□□□ -0.42
NIF3L1-204ENST00000409357 CCZ1P86791 482 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms