RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 GMLQ99445 158 aa24.43■■□□□ 1.5
SMARCB1-204ENST00000407422 ZNF408Q9H9D4 720 aa24.43■■□□□ 1.5
SMARCB1-204ENST00000407422 WDR33Q9C0J8 1336 aaKnown RBP24.43■■□□□ 1.5
SMARCB1-204ENST00000407422 ZNF609O15014 1411 aa24.43■■□□□ 1.5
SMARCB1-204ENST00000407422 SNAP23O00161 211 aa24.43■■□□□ 1.5
SMARCB1-204ENST00000407422 TLL2Q9Y6L7 1015 aa24.43■■□□□ 1.5
SMARCB1-204ENST00000407422 TAF5LO75529 589 aa24.42■■□□□ 1.5
SMARCB1-204ENST00000407422 ZNF280AP59817 542 aaPredicted RBP24.42■■□□□ 1.5
SMARCB1-204ENST00000407422 HELBQ8NG08 1087 aaPredicted RBP24.42■■□□□ 1.5
SMARCB1-204ENST00000407422 ZNF594Q96JF6 807 aaPredicted RBP24.42■■□□□ 1.5
SMARCB1-204ENST00000407422 MXD3Q9BW11 206 aa24.42■■□□□ 1.5
SMARCB1-204ENST00000407422 ASTN2O75129 1339 aaPredicted RBP24.42■■□□□ 1.5
SMARCB1-204ENST00000407422 NBPF7P0C2Y1 421 aaPredicted RBP24.41■■□□□ 1.5
SMARCB1-204ENST00000407422 PAXIP1Q6ZW49 1069 aaPredicted RBP24.41■■□□□ 1.5
SMARCB1-204ENST00000407422 KRT26Q7Z3Y9 468 aa24.41■■□□□ 1.5
SMARCB1-204ENST00000407422 KAZALD1Q96I82 304 aa24.41■■□□□ 1.5
SMARCB1-204ENST00000407422 COA1Q9GZY4 146 aa24.41■■□□□ 1.5
SMARCB1-204ENST00000407422 CYP4F22Q6NT55 531 aa24.4■■□□□ 1.5
SMARCB1-204ENST00000407422 SAPCD2Q86UD0 394 aa24.4■■□□□ 1.5
SMARCB1-204ENST00000407422 TRMT2AQ8IZ69 625 aaKnown RBP24.4■■□□□ 1.5
SMARCB1-204ENST00000407422 SUCLG2Q96I99 432 aa24.4■■□□□ 1.5
SMARCB1-204ENST00000407422 USP17L8P0C7I0 530 aa24.39■■□□□ 1.5
SMARCB1-204ENST00000407422 KCNJ4P48050 445 aa24.39■■□□□ 1.5
SMARCB1-204ENST00000407422 GRM1Q13255 1194 aa24.39■■□□□ 1.5
SMARCB1-204ENST00000407422 CCDC57Q2TAC2 916 aa24.39■■□□□ 1.5
SMARCB1-204ENST00000407422 DACT2Q5SW24 774 aa24.39■■□□□ 1.5
SMARCB1-204ENST00000407422 CAPNS2Q96L46 248 aa24.39■■□□□ 1.5
SMARCB1-204ENST00000407422 PTPRCP08575 1304 aa24.39■■□□□ 1.49
SMARCB1-204ENST00000407422 ADM5C9JUS6 153 aa24.39■■□□□ 1.49
SMARCB1-204ENST00000407422 FOXN1O15353 648 aa24.39■■□□□ 1.49
SMARCB1-204ENST00000407422 FBXW7Q969H0 707 aa24.39■■□□□ 1.49
SMARCB1-204ENST00000407422 DCPSQ96C86 337 aaKnown RBP24.39■■□□□ 1.49
SMARCB1-204ENST00000407422 GGA3Q9NZ52 723 aa24.39■■□□□ 1.49
SMARCB1-204ENST00000407422 UTYO14607 1347 aa24.37■■□□□ 1.49
SMARCB1-204ENST00000407422 IRS2Q9Y4H2 1338 aa24.37■■□□□ 1.49
SMARCB1-204ENST00000407422 SCARF1Q14162 830 aa24.37■■□□□ 1.49
SMARCB1-204ENST00000407422 MYOZ2Q9NPC6 264 aa24.37■■□□□ 1.49
SMARCB1-204ENST00000407422 WBP1LQ9NX94 342 aa24.37■■□□□ 1.49
SMARCB1-204ENST00000407422 TAF7LQ5H9L4 462 aa24.36■■□□□ 1.49
SMARCB1-204ENST00000407422 STRIP1Q5VSL9 837 aa24.36■■□□□ 1.49
SMARCB1-204ENST00000407422 LDHAL6AQ6ZMR3 332 aa24.36■■□□□ 1.49
SMARCB1-204ENST00000407422 ECE1P42892 770 aa24.35■■□□□ 1.49
SMARCB1-204ENST00000407422 THSD7BQ9C0I4 1608 aa24.35■■□□□ 1.49
SMARCB1-204ENST00000407422 ALDH1L2Q3SY69 923 aa24.35■■□□□ 1.49
SMARCB1-204ENST00000407422 ANGEL2Q5VTE6 544 aaKnown RBP24.35■■□□□ 1.49
SMARCB1-204ENST00000407422 TTLL5Q6EMB2 1281 aa24.35■■□□□ 1.49
SMARCB1-204ENST00000407422 CNNM1Q9NRU3 951 aa24.35■■□□□ 1.49
SMARCB1-204ENST00000407422 PLIN1O60240 522 aa24.34■■□□□ 1.49
SMARCB1-204ENST00000407422 SULF1Q8IWU6 871 aa24.34■■□□□ 1.49
SMARCB1-204ENST00000407422 AIDAQ96BJ3 306 aa24.34■■□□□ 1.49
SMARCB1-204ENST00000407422 BICC1Q9H694 974 aaKnown RBP24.34■■□□□ 1.49
SMARCB1-204ENST00000407422 CD209Q9NNX6 404 aa24.34■■□□□ 1.49
SMARCB1-204ENST00000407422 SMC4Q9NTJ3 1288 aa24.34■■□□□ 1.49
SMARCB1-204ENST00000407422 AOC2O75106 756 aa24.33■■□□□ 1.49
SMARCB1-204ENST00000407422 GTF2IP78347 998 aa24.33■■□□□ 1.49
SMARCB1-204ENST00000407422 C15orf52Q6ZUT6 534 aaKnown RBP24.32■■□□□ 1.48
SMARCB1-204ENST00000407422 PUS3Q9BZE2 481 aaKnown RBP24.32■■□□□ 1.48
SMARCB1-204ENST00000407422 SCAF8Q9UPN6 1271 aaKnown RBP24.32■■□□□ 1.48
SMARCB1-204ENST00000407422 MAP2K1Q02750 393 aaPredicted RBP24.32■■□□□ 1.48
SMARCB1-204ENST00000407422 NBPF9Q3BBW0 867 aa24.32■■□□□ 1.48
SMARCB1-204ENST00000407422 ANKRD44Q8N8A2 993 aa24.32■■□□□ 1.48
SMARCB1-204ENST00000407422 HHIPL1Q96JK4 782 aa24.32■■□□□ 1.48
SMARCB1-204ENST00000407422 USP44Q9H0E7 712 aa24.32■■□□□ 1.48
SMARCB1-204ENST00000407422 MYO3BQ8WXR4 1341 aa24.31■■□□□ 1.48
SMARCB1-204ENST00000407422 HUNKP57058 714 aa24.31■■□□□ 1.48
SMARCB1-204ENST00000407422 RABL6Q3YEC7 729 aaPredicted RBP24.31■■□□□ 1.48
SMARCB1-204ENST00000407422 TNS4Q8IZW8 715 aa24.31■■□□□ 1.48
SMARCB1-204ENST00000407422 OGFOD1Q8N543 542 aa24.31■■□□□ 1.48
SMARCB1-204ENST00000407422 CTCFP49711 727 aaPredicted RBP24.3■■□□□ 1.48
SMARCB1-204ENST00000407422 KIAA0825Q8IV33 1275 aa24.3■■□□□ 1.48
SMARCB1-204ENST00000407422 GBA2Q9HCG7 927 aaPredicted RBP24.3■■□□□ 1.48
SMARCB1-204ENST00000407422 CDCA5Q96FF9 252 aa24.29■■□□□ 1.48
SMARCB1-204ENST00000407422 WNT10BO00744 389 aa24.28■■□□□ 1.48
SMARCB1-204ENST00000407422 IL1R1P14778 569 aa24.28■■□□□ 1.48
SMARCB1-204ENST00000407422 ZNF804AQ7Z570 1209 aa24.28■■□□□ 1.48
SMARCB1-204ENST00000407422 CERS5Q8N5B7 392 aa24.28■■□□□ 1.48
SMARCB1-204ENST00000407422 RIPOR2Q9Y4F9 1068 aa24.28■■□□□ 1.48
SMARCB1-204ENST00000407422 CT47B1P0C2W7 299 aaPredicted RBP24.27■■□□□ 1.48
SMARCB1-204ENST00000407422 MAP2K2P36507 400 aa24.27■■□□□ 1.48
SMARCB1-204ENST00000407422 LBX1P52954 281 aa24.27■■□□□ 1.48
SMARCB1-204ENST00000407422 C2orf69Q8N8R5 385 aa24.27■■□□□ 1.48
SMARCB1-204ENST00000407422 NOB1Q9ULX3 412 aaKnown RBP24.27■■□□□ 1.48
SMARCB1-204ENST00000407422 PITPNM2Q9BZ72 1349 aa24.27■■□□□ 1.48
SMARCB1-204ENST00000407422 SASH1O94885 1247 aa24.26■■□□□ 1.47
SMARCB1-204ENST00000407422 JAG2Q9Y219 1238 aa24.26■■□□□ 1.47
SMARCB1-204ENST00000407422 HSPA8P11142 646 aaKnown RBP24.25■■□□□ 1.47
SMARCB1-204ENST00000407422 LRRC24Q50LG9 513 aa24.25■■□□□ 1.47
SMARCB1-204ENST00000407422 MIER1Q8N108 512 aa24.25■■□□□ 1.47
SMARCB1-204ENST00000407422 KLHDC4Q8TBB5 520 aa24.25■■□□□ 1.47
SMARCB1-204ENST00000407422 ZIC5Q96T25 663 aa24.25■■□□□ 1.47
SMARCB1-204ENST00000407422 PRDM10Q9NQV6 1147 aa24.25■■□□□ 1.47
SMARCB1-204ENST00000407422 PRAMEF18Q5VWM3 479 aa24.24■■□□□ 1.47
SMARCB1-204ENST00000407422 GYG1P46976 350 aa24.24■■□□□ 1.47
SMARCB1-204ENST00000407422 UBE4AQ14139 1066 aa24.24■■□□□ 1.47
SMARCB1-204ENST00000407422 HDAC9Q9UKV0 1011 aa24.24■■□□□ 1.47
SMARCB1-204ENST00000407422 RARSP54136 660 aaKnown RBP24.23■■□□□ 1.47
SMARCB1-204ENST00000407422 RGMBQ6NW40 437 aa24.23■■□□□ 1.47
SMARCB1-204ENST00000407422 MROH5Q6ZUA9 1318 aa24.23■■□□□ 1.47
SMARCB1-204ENST00000407422 MMP14P50281 582 aa24.22■■□□□ 1.47
SMARCB1-204ENST00000407422 BRPF1P55201 1214 aaPredicted RBP24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms