RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 CCDC30Q5VVM6 783 aa25.83■■□□□ 1.73
CUEDC1-202ENST00000407144 CREB3L3Q68CJ9 461 aa25.83■■□□□ 1.73
CUEDC1-202ENST00000407144 CEP120Q8N960 986 aa25.83■■□□□ 1.73
CUEDC1-202ENST00000407144 FAM71BQ8TC56 605 aa25.83■■□□□ 1.73
CUEDC1-202ENST00000407144 RHPN1Q8TCX5 695 aa25.83■■□□□ 1.73
CUEDC1-202ENST00000407144 FBLN1P23142 703 aa25.83■■□□□ 1.73
CUEDC1-202ENST00000407144 GLRX3O76003 335 aaKnown RBP25.82■■□□□ 1.72
CUEDC1-202ENST00000407144 AKAP2Q9Y2D5 859 aa25.82■■□□□ 1.72
CUEDC1-202ENST00000407144 XRN1Q8IZH2 1706 aaKnown RBP25.82■■□□□ 1.72
CUEDC1-202ENST00000407144 ERLIN1O75477 346 aa25.82■■□□□ 1.72
CUEDC1-202ENST00000407144 ADD1P35611 737 aaKnown RBP25.82■■□□□ 1.72
CUEDC1-202ENST00000407144 DNAJC21Q5F1R6 531 aaKnown RBP25.82■■□□□ 1.72
CUEDC1-202ENST00000407144 SUFUQ9UMX1 484 aa25.81■■□□□ 1.72
CUEDC1-202ENST00000407144 FAN1Q9Y2M0 1017 aa25.81■■□□□ 1.72
CUEDC1-202ENST00000407144 USP8P40818 1118 aa25.8■■□□□ 1.72
CUEDC1-202ENST00000407144 SATB1Q01826 763 aa25.8■■□□□ 1.72
CUEDC1-202ENST00000407144 POLA2Q14181 598 aa25.8■■□□□ 1.72
CUEDC1-202ENST00000407144 L1RE1Q9UN81 338 aa25.8■■□□□ 1.72
CUEDC1-202ENST00000407144 ARHGAP6O43182 974 aa25.8■■□□□ 1.72
CUEDC1-202ENST00000407144 BLOC1S2Q6QNY1 142 aa25.8■■□□□ 1.72
CUEDC1-202ENST00000407144 DNAAF4Q8WXU2 420 aa25.8■■□□□ 1.72
CUEDC1-202ENST00000407144 TACO1Q9BSH4 297 aaKnown RBP25.8■■□□□ 1.72
CUEDC1-202ENST00000407144 CABP1Q9NZU7 370 aa25.8■■□□□ 1.72
CUEDC1-202ENST00000407144 RBM8AQ9Y5S9 174 aaKnown RBP25.8■■□□□ 1.72
CUEDC1-202ENST00000407144 CRB1P82279 1406 aa25.8■■□□□ 1.72
CUEDC1-202ENST00000407144 RPS6KB1P23443 525 aa25.79■■□□□ 1.72
CUEDC1-202ENST00000407144 MSANTD4Q8NCY6 345 aa25.79■■□□□ 1.72
CUEDC1-202ENST00000407144 MAP4K1Q92918 833 aa25.79■■□□□ 1.72
CUEDC1-202ENST00000407144 PPP2R2CQ9Y2T4 447 aa25.79■■□□□ 1.72
CUEDC1-202ENST00000407144 MYH15Q9Y2K3 1946 aa25.79■■□□□ 1.72
CUEDC1-202ENST00000407144 PXDNLA1KZ92 1463 aa25.79■■□□□ 1.72
CUEDC1-202ENST00000407144 THEMISQ8N1K5 641 aaPredicted RBP25.79■■□□□ 1.72
CUEDC1-202ENST00000407144 BRF1Q92994 677 aa25.79■■□□□ 1.72
CUEDC1-202ENST00000407144 KIFC2Q96AC6 838 aa25.79■■□□□ 1.72
CUEDC1-202ENST00000407144 UTP14AQ9BVJ6 771 aaKnown RBP25.79■■□□□ 1.72
CUEDC1-202ENST00000407144 TOB2Q14106 344 aaPredicted RBP25.78■■□□□ 1.72
CUEDC1-202ENST00000407144 NBPF6Q5VWK0 638 aa25.78■■□□□ 1.72
CUEDC1-202ENST00000407144 ERC1Q8IUD2 1116 aa25.78■■□□□ 1.72
CUEDC1-202ENST00000407144 NBPF4Q96M43 638 aa25.78■■□□□ 1.72
CUEDC1-202ENST00000407144 NCKAP5LQ9HCH0 1330 aa25.78■■□□□ 1.72
CUEDC1-202ENST00000407144 H3BQV1 296 aa25.78■■□□□ 1.72
CUEDC1-202ENST00000407144 GNG11P61952 73 aa25.78■■□□□ 1.72
CUEDC1-202ENST00000407144 TRDNQ13061 729 aa25.78■■□□□ 1.72
CUEDC1-202ENST00000407144 MCM6Q14566 821 aa25.78■■□□□ 1.72
CUEDC1-202ENST00000407144 IFFO2Q5TF58 517 aa25.78■■□□□ 1.72
CUEDC1-202ENST00000407144 SNRKQ9NRH2 765 aa25.78■■□□□ 1.72
CUEDC1-202ENST00000407144 CBFA2T2O43439 604 aa25.77■■□□□ 1.72
CUEDC1-202ENST00000407144 MINK1Q8N4C8 1332 aaPredicted RBP25.77■■□□□ 1.72
CUEDC1-202ENST00000407144 A0A087WWV3 80 aa25.76■■□□□ 1.71
CUEDC1-202ENST00000407144 IKBKBO14920 756 aa25.76■■□□□ 1.71
CUEDC1-202ENST00000407144 SLC27A2O14975 620 aa25.76■■□□□ 1.71
CUEDC1-202ENST00000407144 SURF6O75683 361 aaKnown RBP25.76■■□□□ 1.71
CUEDC1-202ENST00000407144 FANCCQ00597 558 aa25.76■■□□□ 1.71
CUEDC1-202ENST00000407144 NCAPHQ15003 741 aa25.76■■□□□ 1.71
CUEDC1-202ENST00000407144 HSP90B2PQ58FF3 399 aa25.76■■□□□ 1.71
CUEDC1-202ENST00000407144 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.76■■□□□ 1.71
CUEDC1-202ENST00000407144 WDR24Q96S15 920 aa25.76■■□□□ 1.71
CUEDC1-202ENST00000407144 ACBD3Q9H3P7 528 aa25.76■■□□□ 1.71
CUEDC1-202ENST00000407144 KIAA1468Q9P260 1216 aa25.76■■□□□ 1.71
CUEDC1-202ENST00000407144 SRGAP1Q7Z6B7 1085 aa25.76■■□□□ 1.71
CUEDC1-202ENST00000407144 FMR1NBQ8N0W7 255 aaPredicted RBP25.76■■□□□ 1.71
CUEDC1-202ENST00000407144 CNNM3Q8NE01 707 aa25.76■■□□□ 1.71
CUEDC1-202ENST00000407144 TUBBP07437 444 aa25.75■■□□□ 1.71
CUEDC1-202ENST00000407144 NAA16Q6N069 864 aaPredicted RBP25.75■■□□□ 1.71
CUEDC1-202ENST00000407144 MICALL1Q8N3F8 863 aa25.75■■□□□ 1.71
CUEDC1-202ENST00000407144 FSIP1Q8NA03 581 aa25.75■■□□□ 1.71
CUEDC1-202ENST00000407144 STK31Q9BXU1 1019 aa25.75■■□□□ 1.71
CUEDC1-202ENST00000407144 LTKP29376 864 aa25.75■■□□□ 1.71
CUEDC1-202ENST00000407144 DPCR1Q3MIW9 517 aa25.75■■□□□ 1.71
CUEDC1-202ENST00000407144 ZNF396Q96N95 335 aaPredicted RBP25.75■■□□□ 1.71
CUEDC1-202ENST00000407144 GBP3Q9H0R5 595 aa25.75■■□□□ 1.71
CUEDC1-202ENST00000407144 ANKZF1Q9H8Y5 726 aa25.75■■□□□ 1.71
CUEDC1-202ENST00000407144 TMEM2Q9UHN6 1383 aa25.74■■□□□ 1.71
CUEDC1-202ENST00000407144 ARHGAP23Q9P227 1491 aa25.74■■□□□ 1.71
CUEDC1-202ENST00000407144 SLIT1O75093 1534 aa25.74■■□□□ 1.71
CUEDC1-202ENST00000407144 UBTFL1P0CB47 393 aaPredicted RBP25.74■■□□□ 1.71
CUEDC1-202ENST00000407144 TUBB2AQ13885 445 aa25.74■■□□□ 1.71
CUEDC1-202ENST00000407144 EP400NLQ6ZTU2 488 aa25.74■■□□□ 1.71
CUEDC1-202ENST00000407144 DDX11Q96FC9 970 aa25.74■■□□□ 1.71
CUEDC1-202ENST00000407144 TUBB2BQ9BVA1 445 aa25.74■■□□□ 1.71
CUEDC1-202ENST00000407144 CDK19Q9BWU1 502 aa25.74■■□□□ 1.71
CUEDC1-202ENST00000407144 SENP3Q9H4L4 574 aaPredicted RBP25.74■■□□□ 1.71
CUEDC1-202ENST00000407144 KCNG1Q9UIX4 513 aa25.74■■□□□ 1.71
CUEDC1-202ENST00000407144 CHMP4BP1P59074 171 aa25.73■■□□□ 1.71
CUEDC1-202ENST00000407144 FLIIQ13045 1269 aa25.73■■□□□ 1.71
CUEDC1-202ENST00000407144 HSP90AB4PQ58FF6 505 aa25.73■■□□□ 1.71
CUEDC1-202ENST00000407144 NUTM2DQ5VT03 806 aaPredicted RBP25.73■■□□□ 1.71
CUEDC1-202ENST00000407144 MCM10Q7L590 875 aa25.73■■□□□ 1.71
CUEDC1-202ENST00000407144 TMEM139Q8IV31 216 aa25.73■■□□□ 1.71
CUEDC1-202ENST00000407144 HIP1O00291 1037 aa25.73■■□□□ 1.71
CUEDC1-202ENST00000407144 ERLIN2O94905 339 aa25.73■■□□□ 1.71
CUEDC1-202ENST00000407144 NLRP12P59046 1061 aa25.73■■□□□ 1.71
CUEDC1-202ENST00000407144 CEP112Q8N8E3 955 aa25.73■■□□□ 1.71
CUEDC1-202ENST00000407144 DDX54Q8TDD1 881 aaKnown RBP25.73■■□□□ 1.71
CUEDC1-202ENST00000407144 DHX58Q96C10 678 aa25.73■■□□□ 1.71
CUEDC1-202ENST00000407144 USP44Q9H0E7 712 aa25.73■■□□□ 1.71
CUEDC1-202ENST00000407144 A1CFQ9NQ94 594 aaKnown RBP25.73■■□□□ 1.71
CUEDC1-202ENST00000407144 MYO1BO43795 1136 aa25.72■■□□□ 1.71
CUEDC1-202ENST00000407144 N4BP1O75113 896 aaKnown RBP25.72■■□□□ 1.71
CUEDC1-202ENST00000407144 SDF4Q9BRK5 362 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms