RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-222ENST00000406454 POTEB2H3BUK9 544 aa15.22■□□□□ 0.03
CACNA1C-222ENST00000406454 TBCAO75347 108 aaKnown RBP15.22■□□□□ 0.03
CACNA1C-222ENST00000406454 LIG1P18858 919 aa15.22■□□□□ 0.03
CACNA1C-222ENST00000406454 TTLL12Q14166 644 aaPredicted RBP15.22■□□□□ 0.03
CACNA1C-222ENST00000406454 DNAJC25Q9H1X3 360 aa15.22■□□□□ 0.03
CACNA1C-222ENST00000406454 SBNO2Q9Y2G9 1366 aa15.21■□□□□ 0.03
CACNA1C-222ENST00000406454 XRCC6P12956 609 aaKnown RBP eCLIP15.21■□□□□ 0.03
CACNA1C-222ENST00000406454 SPAG1Q07617 926 aa15.21■□□□□ 0.03
CACNA1C-222ENST00000406454 CHST3Q7LGC8 479 aa15.21■□□□□ 0.03
CACNA1C-222ENST00000406454 TRIM75PA6NK02 468 aa15.21■□□□□ 0.03
CACNA1C-222ENST00000406454 F8W031 263 aaPredicted RBP15.21■□□□□ 0.03
CACNA1C-222ENST00000406454 ZNF790Q6PG37 636 aa15.21■□□□□ 0.03
CACNA1C-222ENST00000406454 MYO1BO43795 1136 aa15.21■□□□□ 0.03
CACNA1C-222ENST00000406454 TRAF1Q13077 416 aa15.21■□□□□ 0.03
CACNA1C-222ENST00000406454 MAGEB6Q8N7X4 407 aa15.21■□□□□ 0.03
CACNA1C-222ENST00000406454 CHMP4BP1P59074 171 aa15.21■□□□□ 0.03
CACNA1C-222ENST00000406454 MIGA1Q8NAN2 632 aa15.21■□□□□ 0.03
CACNA1C-222ENST00000406454 PLBD2Q8NHP8 589 aa15.21■□□□□ 0.03
CACNA1C-222ENST00000406454 CTAGE1Q96RT6 745 aa15.21■□□□□ 0.03
CACNA1C-222ENST00000406454 IBSPP21815 317 aaPredicted RBP15.21■□□□□ 0.02
CACNA1C-222ENST00000406454 CEP135Q66GS9 1140 aa15.21■□□□□ 0.02
CACNA1C-222ENST00000406454 HELLSQ9NRZ9 838 aa15.21■□□□□ 0.02
CACNA1C-222ENST00000406454 UBAP1LF5GYI3 381 aa15.2■□□□□ 0.02
CACNA1C-222ENST00000406454 TRMT1LQ7Z2T5 733 aaKnown RBP15.2■□□□□ 0.02
CACNA1C-222ENST00000406454 RTL1A6NKG5 1358 aa15.2■□□□□ 0.02
CACNA1C-222ENST00000406454 GNG11P61952 73 aa15.2■□□□□ 0.02
CACNA1C-222ENST00000406454 CCDC186Q7Z3E2 898 aa15.2■□□□□ 0.02
CACNA1C-222ENST00000406454 AOPEPQ8N6M6 819 aa15.2■□□□□ 0.02
CACNA1C-222ENST00000406454 C8orf37Q96NL8 207 aa15.2■□□□□ 0.02
CACNA1C-222ENST00000406454 SAMM50Q9Y512 469 aa15.2■□□□□ 0.02
CACNA1C-222ENST00000406454 ATP7AQ04656 1500 aa15.2■□□□□ 0.02
CACNA1C-222ENST00000406454 EIF4G3O43432 1585 aaKnown RBP15.2■□□□□ 0.02
CACNA1C-222ENST00000406454 NAPAP54920 295 aa15.2■□□□□ 0.02
CACNA1C-222ENST00000406454 PICALMQ13492 652 aa15.2■□□□□ 0.02
CACNA1C-222ENST00000406454 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.2■□□□□ 0.02
CACNA1C-222ENST00000406454 SYCP3Q8IZU3 236 aa15.2■□□□□ 0.02
CACNA1C-222ENST00000406454 ERICH4A6NGS2 130 aa15.2■□□□□ 0.02
CACNA1C-222ENST00000406454 METTL22Q9BUU2 404 aaPredicted RBP15.2■□□□□ 0.02
CACNA1C-222ENST00000406454 EYA2O00167 538 aa15.2■□□□□ 0.02
CACNA1C-222ENST00000406454 OTUD7AQ8TE49 926 aaPredicted RBP15.2■□□□□ 0.02
CACNA1C-222ENST00000406454 TMCO5BA8MYB1 307 aa15.19■□□□□ 0.02
CACNA1C-222ENST00000406454 WDHD1O75717 1129 aaPredicted RBP15.19■□□□□ 0.02
CACNA1C-222ENST00000406454 C6orf50Q9HD87 102 aa15.19■□□□□ 0.02
CACNA1C-222ENST00000406454 ANKRD2Q9GZV1 360 aa15.19■□□□□ 0.02
CACNA1C-222ENST00000406454 WDR70Q9NW82 654 aa15.19■□□□□ 0.02
CACNA1C-222ENST00000406454 RTCBQ9Y3I0 505 aaKnown RBP15.19■□□□□ 0.02
CACNA1C-222ENST00000406454 ZMYM4Q5VZL5 1548 aa15.19■□□□□ 0.02
CACNA1C-222ENST00000406454 USP8P40818 1118 aa15.19■□□□□ 0.02
CACNA1C-222ENST00000406454 NAA15Q9BXJ9 866 aaKnown RBP15.19■□□□□ 0.02
CACNA1C-222ENST00000406454 PRIMPOLQ96LW4 560 aa15.19■□□□□ 0.02
CACNA1C-222ENST00000406454 PAXBP1Q9Y5B6 917 aa15.19■□□□□ 0.02
CACNA1C-222ENST00000406454 AKR1B10O60218 316 aa15.18■□□□□ 0.02
CACNA1C-222ENST00000406454 SKILP12757 684 aa15.18■□□□□ 0.02
CACNA1C-222ENST00000406454 EZRP15311 586 aaKnown RBP15.18■□□□□ 0.02
CACNA1C-222ENST00000406454 HSPA2P54652 639 aa15.18■□□□□ 0.02
CACNA1C-222ENST00000406454 MCM9Q9NXL9 1143 aa15.18■□□□□ 0.02
CACNA1C-222ENST00000406454 HDAC9Q9UKV0 1011 aa15.18■□□□□ 0.02
CACNA1C-222ENST00000406454 CBX1P83916 185 aa15.18■□□□□ 0.02
CACNA1C-222ENST00000406454 DHX58Q96C10 678 aa15.18■□□□□ 0.02
CACNA1C-222ENST00000406454 INSRP06213 1382 aa15.18■□□□□ 0.02
CACNA1C-222ENST00000406454 ATP10AO60312 1499 aa15.18■□□□□ 0.02
CACNA1C-222ENST00000406454 CALML3P27482 149 aa15.18■□□□□ 0.02
CACNA1C-222ENST00000406454 BRAPQ7Z569 592 aa15.18■□□□□ 0.02
CACNA1C-222ENST00000406454 EHBP1Q8NDI1 1231 aa15.18■□□□□ 0.02
CACNA1C-222ENST00000406454 ZNF830Q96NB3 372 aaPredicted RBP15.18■□□□□ 0.02
CACNA1C-222ENST00000406454 TNNI3KQ59H18 835 aa15.18■□□□□ 0.02
CACNA1C-222ENST00000406454 FPGT-TNNI3KV9GXZ4 949 aa15.18■□□□□ 0.02
CACNA1C-222ENST00000406454 PRIM1P49642 420 aaKnown RBP15.18■□□□□ 0.02
CACNA1C-222ENST00000406454 USP19O94966 1318 aa15.18■□□□□ 0.02
CACNA1C-222ENST00000406454 PLCG2P16885 1265 aa15.18■□□□□ 0.02
CACNA1C-222ENST00000406454 TYRO3Q06418 890 aa15.18■□□□□ 0.02
CACNA1C-222ENST00000406454 IFFO1Q0D2I5 559 aa15.18■□□□□ 0.02
CACNA1C-222ENST00000406454 AOX1Q06278 1338 aa15.17■□□□□ 0.02
CACNA1C-222ENST00000406454 SHTN1A0MZ66 631 aa15.17■□□□□ 0.02
CACNA1C-222ENST00000406454 PSMA7O14818 248 aa15.17■□□□□ 0.02
CACNA1C-222ENST00000406454 HSP90AA4PQ58FG1 418 aa15.17■□□□□ 0.02
CACNA1C-222ENST00000406454 CTNNBL1Q8WYA6 563 aaPredicted RBP15.17■□□□□ 0.02
CACNA1C-222ENST00000406454 CCDC113Q9H0I3 377 aa15.17■□□□□ 0.02
CACNA1C-222ENST00000406454 LGR6Q9HBX8 967 aa15.17■□□□□ 0.02
CACNA1C-222ENST00000406454 PTPRTO14522 1441 aa15.17■□□□□ 0.02
CACNA1C-222ENST00000406454 SYT1P21579 422 aa15.17■□□□□ 0.02
CACNA1C-222ENST00000406454 KDM2BQ8NHM5 1336 aa15.17■□□□□ 0.02
CACNA1C-222ENST00000406454 GSTTP1A0A1W2PQM5 241 aa15.17■□□□□ 0.02
CACNA1C-222ENST00000406454 NOP2P46087 812 aaKnown RBP15.17■□□□□ 0.02
CACNA1C-222ENST00000406454 ASIC1P78348 528 aa15.17■□□□□ 0.02
CACNA1C-222ENST00000406454 KRT2P35908 639 aa15.17■□□□□ 0.02
CACNA1C-222ENST00000406454 NSFL1CQ9UNZ2 370 aaKnown RBP15.17■□□□□ 0.02
CACNA1C-222ENST00000406454 A0A1B0GUL7 405 aa15.16■□□□□ 0.02
CACNA1C-222ENST00000406454 FAM89AQ96GI7 184 aa15.16■□□□□ 0.02
CACNA1C-222ENST00000406454 MACROD2A1Z1Q3 448 aa15.16■□□□□ 0.02
CACNA1C-222ENST00000406454 CPA1P15085 419 aa15.16■□□□□ 0.02
CACNA1C-222ENST00000406454 DYDC1Q8WWB3 177 aa15.16■□□□□ 0.02
CACNA1C-222ENST00000406454 MBD4O95243 580 aa15.16■□□□□ 0.02
CACNA1C-222ENST00000406454 NOLC1Q14978 699 aaKnown RBP eCLIP15.16■□□□□ 0.02
CACNA1C-222ENST00000406454 GOPCQ9HD26 462 aa15.16■□□□□ 0.02
CACNA1C-222ENST00000406454 ORAI2Q96SN7 254 aa15.16■□□□□ 0.02
CACNA1C-222ENST00000406454 DBNDD2Q9BQY9 259 aa15.16■□□□□ 0.02
CACNA1C-222ENST00000406454 BTG4Q9NY30 223 aa15.16■□□□□ 0.02
CACNA1C-222ENST00000406454 TIMM10P62072 90 aa15.16■□□□□ 0.02
CACNA1C-222ENST00000406454 RRP36Q96EU6 259 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms