RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 ZC3H6P61129 1189 aaKnown RBP6.22□□□□□ -1.41
HMGB1P17-201ENST00000403495 TPTE2Q6XPS3 522 aa6.22□□□□□ -1.41
HMGB1P17-201ENST00000403495 FAM35AQ86V20 835 aa6.22□□□□□ -1.41
HMGB1P17-201ENST00000403495 NXPE3Q969Y0 559 aa6.22□□□□□ -1.41
HMGB1P17-201ENST00000403495 CCSER2Q9H7U1 834 aa6.22□□□□□ -1.41
HMGB1P17-201ENST00000403495 NXF1Q9UBU9 619 aaKnown RBP6.22□□□□□ -1.41
HMGB1P17-201ENST00000403495 SLC6A14Q9UN76 642 aa6.22□□□□□ -1.41
HMGB1P17-201ENST00000403495 TRAK1Q9UPV9 953 aa6.22□□□□□ -1.41
HMGB1P17-201ENST00000403495 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P17-201ENST00000403495 PDE2AO00408 941 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P17-201ENST00000403495 GHRHP01286 108 aa6.21□□□□□ -1.42
HMGB1P17-201ENST00000403495 CELA3AP09093 270 aa6.21□□□□□ -1.42
HMGB1P17-201ENST00000403495 HOXD8P13378 290 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P17-201ENST00000403495 ITGAEP38570 1179 aa6.21□□□□□ -1.42
HMGB1P17-201ENST00000403495 MAP3K10Q02779 954 aa6.21□□□□□ -1.42
HMGB1P17-201ENST00000403495 PERM1Q5SV97 790 aa6.21□□□□□ -1.42
HMGB1P17-201ENST00000403495 CEP135Q66GS9 1140 aa6.21□□□□□ -1.42
HMGB1P17-201ENST00000403495 PRPF40BQ6NWY9 871 aaKnown RBP6.21□□□□□ -1.42
HMGB1P17-201ENST00000403495 HS2ST1Q7LGA3 356 aa6.21□□□□□ -1.42
HMGB1P17-201ENST00000403495 USP48Q86UV5 1035 aa6.21□□□□□ -1.42
HMGB1P17-201ENST00000403495 FCHSD1Q86WN1 690 aa6.21□□□□□ -1.42
HMGB1P17-201ENST00000403495 POP1Q99575 1024 aaKnown RBP6.21□□□□□ -1.42
HMGB1P17-201ENST00000403495 PBX4Q9BYU1 374 aa6.21□□□□□ -1.42
HMGB1P17-201ENST00000403495 SRCIN1Q9C0H9 1055 aa6.21□□□□□ -1.42
HMGB1P17-201ENST00000403495 LACRTQ9GZZ8 138 aa6.21□□□□□ -1.42
HMGB1P17-201ENST00000403495 MUC3BQ9H195 1237 aa6.21□□□□□ -1.42
HMGB1P17-201ENST00000403495 CAPN10Q9HC96 672 aa6.21□□□□□ -1.42
HMGB1P17-201ENST00000403495 PPP1R1BQ9UD71 204 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P17-201ENST00000403495 TRIM33Q9UPN9 1127 aa6.21□□□□□ -1.42
HMGB1P17-201ENST00000403495 ERBB4Q15303 1308 aa6.21□□□□□ -1.42
HMGB1P17-201ENST00000403495 SIN3BO75182 1162 aa6.2□□□□□ -1.42
HMGB1P17-201ENST00000403495 ADH7P40394 386 aa6.2□□□□□ -1.42
HMGB1P17-201ENST00000403495 CCDC85BQ15834 202 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P17-201ENST00000403495 PLD4Q96BZ4 506 aa6.2□□□□□ -1.42
HMGB1P17-201ENST00000403495 TINF2Q9BSI4 451 aa6.2□□□□□ -1.42
HMGB1P17-201ENST00000403495 COL25A1Q9BXS0 654 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P17-201ENST00000403495 TGIF2Q9GZN2 237 aa6.2□□□□□ -1.42
HMGB1P17-201ENST00000403495 SMG9Q9H0W8 520 aaKnown RBP6.2□□□□□ -1.42
HMGB1P17-201ENST00000403495 EFCC1Q9HA90 598 aa6.2□□□□□ -1.42
HMGB1P17-201ENST00000403495 SRA1Q9HD15 236 aaKnown RBP6.2□□□□□ -1.42
HMGB1P17-201ENST00000403495 KBTBD4Q9NVX7 518 aa6.2□□□□□ -1.42
HMGB1P17-201ENST00000403495 PPP4R2Q9NY27 417 aa6.2□□□□□ -1.42
HMGB1P17-201ENST00000403495 GGA1Q9UJY5 639 aa6.2□□□□□ -1.42
HMGB1P17-201ENST00000403495 A0A096LPE4 126 aa6.19□□□□□ -1.42
HMGB1P17-201ENST00000403495 A0A1W2PPZ6 126 aa6.19□□□□□ -1.42
HMGB1P17-201ENST00000403495 MINDY4BA8MYZ0 360 aa6.19□□□□□ -1.42
HMGB1P17-201ENST00000403495 H3BM21 787 aa6.19□□□□□ -1.42
HMGB1P17-201ENST00000403495 CDC25BP30305 580 aa6.19□□□□□ -1.42
HMGB1P17-201ENST00000403495 FAAP100Q0VG06 881 aa6.19□□□□□ -1.42
HMGB1P17-201ENST00000403495 TMEM102Q8N9M5 508 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P17-201ENST00000403495 NUDT8Q8WV74 236 aa6.19□□□□□ -1.42
HMGB1P17-201ENST00000403495 C8orf37Q96NL8 207 aa6.19□□□□□ -1.42
HMGB1P17-201ENST00000403495 BHLHE41Q9C0J9 482 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P17-201ENST00000403495 DDX41Q9UJV9 622 aaKnown RBP6.19□□□□□ -1.42
HMGB1P17-201ENST00000403495 IGF1RP08069 1367 aa6.18□□□□□ -1.42
HMGB1P17-201ENST00000403495 PAGE1O75459 146 aa6.18□□□□□ -1.42
HMGB1P17-201ENST00000403495 ADH6P28332 368 aa6.18□□□□□ -1.42
HMGB1P17-201ENST00000403495 ST13P50502 369 aaKnown RBP6.18□□□□□ -1.42
HMGB1P17-201ENST00000403495 KRT76Q01546 638 aa6.18□□□□□ -1.42
HMGB1P17-201ENST00000403495 PTPN12Q05209 780 aaKnown RBP6.18□□□□□ -1.42
HMGB1P17-201ENST00000403495 GDF6Q6KF10 455 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P17-201ENST00000403495 ELMSAN1Q6PJG2 1045 aa6.18□□□□□ -1.42
HMGB1P17-201ENST00000403495 ERMP1Q7Z2K6 904 aa6.18□□□□□ -1.42
HMGB1P17-201ENST00000403495 TNFRSF25Q93038 417 aa6.18□□□□□ -1.42
HMGB1P17-201ENST00000403495 LPIN3Q9BQK8 851 aa6.18□□□□□ -1.42
HMGB1P17-201ENST00000403495 ZNF576Q9H609 170 aa6.18□□□□□ -1.42
HMGB1P17-201ENST00000403495 SH2B1Q9NRF2 756 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P17-201ENST00000403495 MBIPQ9NS73 344 aa6.18□□□□□ -1.42
HMGB1P17-201ENST00000403495 GPN3Q9UHW5 284 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P17-201ENST00000403495 TLR6Q9Y2C9 796 aa6.18□□□□□ -1.42
HMGB1P17-201ENST00000403495 LOC105371045A0A1W2PR82 267 aa6.17□□□□□ -1.42
HMGB1P17-201ENST00000403495 ARAFP10398 606 aa6.17□□□□□ -1.42
HMGB1P17-201ENST00000403495 ZNF787Q6DD87 383 aa6.17□□□□□ -1.42
HMGB1P17-201ENST00000403495 PSAPL1Q6NUJ1 521 aa6.17□□□□□ -1.42
HMGB1P17-201ENST00000403495 C1orf229Q6ZS94 237 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P17-201ENST00000403495 C8orf86Q6ZUL3 223 aa6.17□□□□□ -1.42
HMGB1P17-201ENST00000403495 MICALL1Q8N3F8 863 aa6.17□□□□□ -1.42
HMGB1P17-201ENST00000403495 ENC1O14682 589 aa6.16□□□□□ -1.42
HMGB1P17-201ENST00000403495 SMNDC1O75940 238 aaKnown RBP eCLIP6.16□□□□□ -1.42
HMGB1P17-201ENST00000403495 ITPKAP23677 461 aa6.16□□□□□ -1.42
HMGB1P17-201ENST00000403495 GBP2P32456 591 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P17-201ENST00000403495 FAM160A1Q05DH4 1040 aa6.16□□□□□ -1.42
HMGB1P17-201ENST00000403495 RASIP1Q5U651 963 aa6.16□□□□□ -1.42
HMGB1P17-201ENST00000403495 HGSNATQ68CP4 663 aa6.16□□□□□ -1.42
HMGB1P17-201ENST00000403495 TXNDC11Q6PKC3 985 aa6.16□□□□□ -1.42
HMGB1P17-201ENST00000403495 ZNF654Q8IZM8 581 aa6.16□□□□□ -1.42
HMGB1P17-201ENST00000403495 SREK1Q8WXA9 508 aaKnown RBP6.16□□□□□ -1.42
HMGB1P17-201ENST00000403495 MDFIQ99750 246 aa6.16□□□□□ -1.42
HMGB1P17-201ENST00000403495 RBSNQ9H1K0 784 aa6.16□□□□□ -1.42
HMGB1P17-201ENST00000403495 SEC31BQ9NQW1 1179 aa6.16□□□□□ -1.42
HMGB1P17-201ENST00000403495 INPP5FQ9Y2H2 1132 aa6.16□□□□□ -1.42
HMGB1P17-201ENST00000403495 STARD13Q9Y3M8 1113 aa6.16□□□□□ -1.42
HMGB1P17-201ENST00000403495 ADARB2-AS1A8MUL3 147 aa6.15□□□□□ -1.42
HMGB1P17-201ENST00000403495 TERTO14746 1132 aaKnown RBP6.15□□□□□ -1.42
HMGB1P17-201ENST00000403495 DNAJA1P31689 397 aaKnown RBP6.15□□□□□ -1.42
HMGB1P17-201ENST00000403495 MAP2K3P46734 347 aa6.15□□□□□ -1.42
HMGB1P17-201ENST00000403495 PAK2Q13177 524 aa6.15□□□□□ -1.42
HMGB1P17-201ENST00000403495 ZNF423Q2M1K9 1284 aa6.15□□□□□ -1.42
HMGB1P17-201ENST00000403495 VN1R5Q7Z5H4 357 aa6.15□□□□□ -1.42
HMGB1P17-201ENST00000403495 NOC4LQ9BVI4 516 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms