RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 EYA2O00167 538 aa23.97■■□□□ 1.43
RTN4-207ENST00000402434 EPS15P42566 896 aa23.97■■□□□ 1.43
RTN4-207ENST00000402434 FSTL1Q12841 308 aa23.97■■□□□ 1.43
RTN4-207ENST00000402434 UBE4AQ14139 1066 aa23.97■■□□□ 1.43
RTN4-207ENST00000402434 PNMA8AQ86V59 439 aaPredicted RBP23.96■■□□□ 1.43
RTN4-207ENST00000402434 VGLL2Q8N8G2 317 aa23.96■■□□□ 1.43
RTN4-207ENST00000402434 SMC1BQ8NDV3 1235 aa23.96■■□□□ 1.43
RTN4-207ENST00000402434 DPF2Q92785 391 aa23.96■■□□□ 1.43
RTN4-207ENST00000402434 COPRSQ9NQ92 184 aa23.96■■□□□ 1.43
RTN4-207ENST00000402434 CIAO1O76071 339 aa23.95■■□□□ 1.42
RTN4-207ENST00000402434 PDE8BO95263 885 aa23.95■■□□□ 1.42
RTN4-207ENST00000402434 RPS12P25398 132 aaKnown RBP23.95■■□□□ 1.42
RTN4-207ENST00000402434 METTL24Q5JXM2 366 aa23.95■■□□□ 1.42
RTN4-207ENST00000402434 ATG9AQ7Z3C6 839 aa23.95■■□□□ 1.42
RTN4-207ENST00000402434 SRGAP3O43295 1099 aa23.94■■□□□ 1.42
RTN4-207ENST00000402434 POTEIP0CG38 1075 aa23.94■■□□□ 1.42
RTN4-207ENST00000402434 POTEJP0CG39 1038 aa23.94■■□□□ 1.42
RTN4-207ENST00000402434 ZBTB12Q9Y330 459 aaPredicted RBP23.94■■□□□ 1.42
RTN4-207ENST00000402434 USP17L3A6NCW0 530 aa23.94■■□□□ 1.42
RTN4-207ENST00000402434 USP17L4A6NCW7 530 aa23.94■■□□□ 1.42
RTN4-207ENST00000402434 USP17L1Q7RTZ2 530 aa23.94■■□□□ 1.42
RTN4-207ENST00000402434 CD209Q9NNX6 404 aa23.94■■□□□ 1.42
RTN4-207ENST00000402434 LDHDQ86WU2 507 aa23.93■■□□□ 1.42
RTN4-207ENST00000402434 ADARB2Q9NS39 739 aaKnown RBP23.93■■□□□ 1.42
RTN4-207ENST00000402434 CNOT7Q9UIV1 285 aaKnown RBP23.93■■□□□ 1.42
RTN4-207ENST00000402434 PSME4Q14997 1843 aa23.93■■□□□ 1.42
RTN4-207ENST00000402434 ZNF609O15014 1411 aa23.92■■□□□ 1.42
RTN4-207ENST00000402434 STRIP1Q5VSL9 837 aa23.92■■□□□ 1.42
RTN4-207ENST00000402434 USP50Q70EL3 339 aaPredicted RBP23.92■■□□□ 1.42
RTN4-207ENST00000402434 PA2G4Q9UQ80 394 aaKnown RBP23.92■■□□□ 1.42
RTN4-207ENST00000402434 IL1R1P14778 569 aa23.91■■□□□ 1.42
RTN4-207ENST00000402434 PDE3AQ14432 1141 aa23.91■■□□□ 1.42
RTN4-207ENST00000402434 MVPQ14764 893 aaKnown RBP23.91■■□□□ 1.42
RTN4-207ENST00000402434 EAPPQ56P03 285 aaPredicted RBP23.91■■□□□ 1.42
RTN4-207ENST00000402434 CHADLQ6NUI6 762 aa23.91■■□□□ 1.42
RTN4-207ENST00000402434 RSBN1LQ6PCB5 846 aaPredicted RBP23.91■■□□□ 1.42
RTN4-207ENST00000402434 ZNF804AQ7Z570 1209 aa23.91■■□□□ 1.42
RTN4-207ENST00000402434 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.91■■□□□ 1.42
RTN4-207ENST00000402434 AGBL3Q8NEM8 1001 aa23.91■■□□□ 1.42
RTN4-207ENST00000402434 GMLQ99445 158 aa23.91■■□□□ 1.42
RTN4-207ENST00000402434 SIL1Q9H173 461 aa23.91■■□□□ 1.42
RTN4-207ENST00000402434 PNMA6EA0A0J9YXQ4 647 aa23.9■■□□□ 1.42
RTN4-207ENST00000402434 IL15P40933 162 aaPredicted RBP23.9■■□□□ 1.42
RTN4-207ENST00000402434 DACT2Q5SW24 774 aa23.9■■□□□ 1.42
RTN4-207ENST00000402434 MICALL2Q8IY33 904 aa23.9■■□□□ 1.42
RTN4-207ENST00000402434 ADAMTSL1Q8N6G6 1762 aa23.9■■□□□ 1.42
RTN4-207ENST00000402434 FGFR2P21802 821 aa23.89■■□□□ 1.42
RTN4-207ENST00000402434 FAM84BQ96KN1 310 aaPredicted RBP23.89■■□□□ 1.42
RTN4-207ENST00000402434 SHTN1A0MZ66 631 aa23.88■■□□□ 1.41
RTN4-207ENST00000402434 H7C1D1 291 aa23.88■■□□□ 1.41
RTN4-207ENST00000402434 ATP8B2P98198 1209 aa23.88■■□□□ 1.41
RTN4-207ENST00000402434 PUM3Q15397 648 aaKnown RBP23.88■■□□□ 1.41
RTN4-207ENST00000402434 TTLL5Q6EMB2 1281 aa23.88■■□□□ 1.41
RTN4-207ENST00000402434 DDX19BQ9UMR2 479 aa23.88■■□□□ 1.41
RTN4-207ENST00000402434 COG6Q9Y2V7 657 aa23.88■■□□□ 1.41
RTN4-207ENST00000402434 HSPA6P17066 643 aa23.87■■□□□ 1.41
RTN4-207ENST00000402434 POLA2Q14181 598 aa23.87■■□□□ 1.41
RTN4-207ENST00000402434 FBXO33Q7Z6M2 555 aa23.87■■□□□ 1.41
RTN4-207ENST00000402434 SSH3Q8TE77 659 aa23.87■■□□□ 1.41
RTN4-207ENST00000402434 C1orf115Q9H7X2 142 aa23.87■■□□□ 1.41
RTN4-207ENST00000402434 CEP126Q9P2H0 1117 aa23.87■■□□□ 1.41
RTN4-207ENST00000402434 HIBADHP31937 336 aaKnown RBP23.87■■□□□ 1.41
RTN4-207ENST00000402434 GYG1P46976 350 aa23.87■■□□□ 1.41
RTN4-207ENST00000402434 TDRD7Q8NHU6 1098 aaKnown RBP23.87■■□□□ 1.41
RTN4-207ENST00000402434 ZNF646O15015 1829 aaPredicted RBP23.86■■□□□ 1.41
RTN4-207ENST00000402434 SASH1O94885 1247 aa23.86■■□□□ 1.41
RTN4-207ENST00000402434 HIRAP54198 1017 aaPredicted RBP23.86■■□□□ 1.41
RTN4-207ENST00000402434 GTF2IP78347 998 aa23.86■■□□□ 1.41
RTN4-207ENST00000402434 C20orf194Q5TEA3 1177 aa23.86■■□□□ 1.41
RTN4-207ENST00000402434 LPIN2Q92539 896 aa23.86■■□□□ 1.41
RTN4-207ENST00000402434 CLEC11AQ9Y240 323 aa23.86■■□□□ 1.41
RTN4-207ENST00000402434 MYO3BQ8WXR4 1341 aa23.86■■□□□ 1.41
RTN4-207ENST00000402434 IFIT1P09914 478 aaKnown RBP23.85■■□□□ 1.41
RTN4-207ENST00000402434 ZNF280AP59817 542 aaPredicted RBP23.85■■□□□ 1.41
RTN4-207ENST00000402434 TRPM4Q8TD43 1214 aa23.85■■□□□ 1.41
RTN4-207ENST00000402434 ZBTB40Q9NUA8 1239 aa23.85■■□□□ 1.41
RTN4-207ENST00000402434 PGAP2Q9UHJ9 254 aa23.85■■□□□ 1.41
RTN4-207ENST00000402434 ITGBL1O95965 494 aaPredicted RBP23.84■■□□□ 1.41
RTN4-207ENST00000402434 USP17L8P0C7I0 530 aa23.84■■□□□ 1.41
RTN4-207ENST00000402434 CAVIN4Q5BKX8 364 aa23.84■■□□□ 1.41
RTN4-207ENST00000402434 SAMD7Q7Z3H4 446 aa23.84■■□□□ 1.41
RTN4-207ENST00000402434 ZC3H15Q8WU90 426 aaKnown RBP23.84■■□□□ 1.41
RTN4-207ENST00000402434 MXD3Q9BW11 206 aa23.84■■□□□ 1.41
RTN4-207ENST00000402434 CHMP4BQ9H444 224 aaKnown RBP23.83■■□□□ 1.41
RTN4-207ENST00000402434 EGFRP00533 1210 aa23.82■■□□□ 1.4
RTN4-207ENST00000402434 SLC5A1P13866 664 aa23.82■■□□□ 1.4
RTN4-207ENST00000402434 FKBP1AP62942 108 aaKnown RBP23.82■■□□□ 1.4
RTN4-207ENST00000402434 ATP2B3Q16720 1220 aa23.82■■□□□ 1.4
RTN4-207ENST00000402434 MAP1SQ66K74 1059 aaPredicted RBP23.82■■□□□ 1.4
RTN4-207ENST00000402434 CEP85Q6P2H3 762 aa23.82■■□□□ 1.4
RTN4-207ENST00000402434 CNTROBQ8N137 903 aa23.82■■□□□ 1.4
RTN4-207ENST00000402434 FBXW7Q969H0 707 aa23.82■■□□□ 1.4
RTN4-207ENST00000402434 FAM205AQ6ZU69 1335 aa23.82■■□□□ 1.4
RTN4-207ENST00000402434 MMP14P50281 582 aa23.81■■□□□ 1.4
RTN4-207ENST00000402434 BCAMP50895 628 aa23.81■■□□□ 1.4
RTN4-207ENST00000402434 VPS37DQ86XT2 251 aa23.81■■□□□ 1.4
RTN4-207ENST00000402434 TBC1D10BQ4KMP7 808 aaPredicted RBP23.81■■□□□ 1.4
RTN4-207ENST00000402434 CERS5Q8N5B7 392 aa23.81■■□□□ 1.4
RTN4-207ENST00000402434 PASKQ96RG2 1323 aa23.8■■□□□ 1.4
RTN4-207ENST00000402434 APLP1P51693 650 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms