RNA–Protein interactions for RNA: ENST00000399793.6

RETREG1-202, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best) BASIC

Gene RETREG1, Length 3,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-202ENST00000399793 RPGRIP1LQ68CZ1 1315 aa10.02□□□□□ -0.8
RETREG1-202ENST00000399793 USP32Q8NFA0 1604 aa10.02□□□□□ -0.8
RETREG1-202ENST00000399793 TMCO5BA8MYB1 307 aa10.02□□□□□ -0.81
RETREG1-202ENST00000399793 HMMRO75330 724 aa10.02□□□□□ -0.81
RETREG1-202ENST00000399793 SKAP2O75563 359 aaPredicted RBP10.02□□□□□ -0.81
RETREG1-202ENST00000399793 IPO7O95373 1038 aaKnown RBP10.02□□□□□ -0.81
RETREG1-202ENST00000399793 CLNS1AP54105 237 aaKnown RBP10.02□□□□□ -0.81
RETREG1-202ENST00000399793 NUCKS1Q9H1E3 243 aaKnown RBP10.02□□□□□ -0.81
RETREG1-202ENST00000399793 RABEP2Q9H5N1 569 aa10.02□□□□□ -0.81
RETREG1-202ENST00000399793 MBIPQ9NS73 344 aa10.02□□□□□ -0.81
RETREG1-202ENST00000399793 CUTAO60888 179 aa10.02□□□□□ -0.81
RETREG1-202ENST00000399793 SHOX2O60902 331 aaPredicted RBP10.02□□□□□ -0.81
RETREG1-202ENST00000399793 PDCP20941 246 aa10.02□□□□□ -0.81
RETREG1-202ENST00000399793 VSNL1P62760 191 aa10.02□□□□□ -0.81
RETREG1-202ENST00000399793 GOLGA8FQ08AF8 430 aa10.02□□□□□ -0.81
RETREG1-202ENST00000399793 GOLGA8DPQ0D2H9 430 aa10.02□□□□□ -0.81
RETREG1-202ENST00000399793 AMOTL1Q8IY63 956 aa10.02□□□□□ -0.81
RETREG1-202ENST00000399793 ZNF513Q8N8E2 541 aaPredicted RBP10.02□□□□□ -0.81
RETREG1-202ENST00000399793 THOC1Q96FV9 657 aaKnown RBP10.02□□□□□ -0.81
RETREG1-202ENST00000399793 SPATS2LQ9NUQ6 558 aaKnown RBP10.02□□□□□ -0.81
RETREG1-202ENST00000399793 PPP6R1Q9UPN7 881 aa10.02□□□□□ -0.81
RETREG1-202ENST00000399793 KIAA0232Q92628 1395 aa10.01□□□□□ -0.81
RETREG1-202ENST00000399793 A0A1B0GUA9 196 aa10.01□□□□□ -0.81
RETREG1-202ENST00000399793 AP1G2O75843 785 aa10.01□□□□□ -0.81
RETREG1-202ENST00000399793 IRAK1P51617 712 aa10.01□□□□□ -0.81
RETREG1-202ENST00000399793 FCHSD1Q86WN1 690 aa10.01□□□□□ -0.81
RETREG1-202ENST00000399793 ANKRD18AQ8IVF6 992 aa10.01□□□□□ -0.81
RETREG1-202ENST00000399793 KIRREL3Q8IZU9 778 aa10.01□□□□□ -0.81
RETREG1-202ENST00000399793 IGSF22Q8N9C0 903 aa10.01□□□□□ -0.81
RETREG1-202ENST00000399793 CCDC12Q8WUD4 166 aaPredicted RBP10.01□□□□□ -0.81
RETREG1-202ENST00000399793 SMARCC1Q92922 1105 aaPredicted RBP10.01□□□□□ -0.81
RETREG1-202ENST00000399793 KAT14Q9H8E8 782 aa10.01□□□□□ -0.81
RETREG1-202ENST00000399793 CPSF2Q9P2I0 782 aaKnown RBP10.01□□□□□ -0.81
RETREG1-202ENST00000399793 RPS6KL1Q9Y6S9 549 aa10.01□□□□□ -0.81
RETREG1-202ENST00000399793 CDHR2Q9BYE9 1310 aa10.01□□□□□ -0.81
RETREG1-202ENST00000399793 RHOXF2BP0C7M4 288 aa10.01□□□□□ -0.81
RETREG1-202ENST00000399793 ACTN3Q08043 901 aaPredicted RBP10.01□□□□□ -0.81
RETREG1-202ENST00000399793 LARP1Q6PKG0 1096 aaKnown RBP10.01□□□□□ -0.81
RETREG1-202ENST00000399793 CEP112Q8N8E3 955 aa10.01□□□□□ -0.81
RETREG1-202ENST00000399793 BCAS4Q8TDM0 211 aa10.01□□□□□ -0.81
RETREG1-202ENST00000399793 RHOXF2Q9BQY4 288 aa10.01□□□□□ -0.81
RETREG1-202ENST00000399793 LSG1Q9H089 658 aaKnown RBP10.01□□□□□ -0.81
RETREG1-202ENST00000399793 EHD4Q9H223 541 aa10.01□□□□□ -0.81
RETREG1-202ENST00000399793 KIAA1210Q9ULL0 1709 aa10.01□□□□□ -0.81
RETREG1-202ENST00000399793 COL3A1P02461 1466 aaPredicted RBP10.01□□□□□ -0.81
RETREG1-202ENST00000399793 CCAR1Q8IX12 1150 aaKnown RBP10□□□□□ -0.81
RETREG1-202ENST00000399793 FMNL2Q96PY5 1086 aa10□□□□□ -0.81
RETREG1-202ENST00000399793 KIF9Q9HAQ2 790 aa10□□□□□ -0.81
RETREG1-202ENST00000399793 KIAA0556O60303 1618 aa10□□□□□ -0.81
RETREG1-202ENST00000399793 FSBPO95073 299 aa10□□□□□ -0.81
RETREG1-202ENST00000399793 GCKP35557 465 aa10□□□□□ -0.81
RETREG1-202ENST00000399793 ADCK5Q3MIX3 580 aa10□□□□□ -0.81
RETREG1-202ENST00000399793 JAKMIP1Q96N16 626 aaKnown RBP10□□□□□ -0.81
RETREG1-202ENST00000399793 GOLPH3LQ9H4A5 285 aa10□□□□□ -0.81
RETREG1-202ENST00000399793 SAMM50Q9Y512 469 aa10□□□□□ -0.81
RETREG1-202ENST00000399793 RWDD2BP57060 319 aa10□□□□□ -0.81
RETREG1-202ENST00000399793 DDX54Q8TDD1 881 aaKnown RBP10□□□□□ -0.81
RETREG1-202ENST00000399793 MICAL1Q8TDZ2 1067 aa10□□□□□ -0.81
RETREG1-202ENST00000399793 LRRCC1Q9C099 1032 aa10□□□□□ -0.81
RETREG1-202ENST00000399793 GBP3Q9H0R5 595 aa10□□□□□ -0.81
RETREG1-202ENST00000399793 KLC4Q9NSK0 619 aa10□□□□□ -0.81
RETREG1-202ENST00000399793 TPCN1Q9ULQ1 816 aa10□□□□□ -0.81
RETREG1-202ENST00000399793 ADGRL3Q9HAR2 1447 aa10□□□□□ -0.81
RETREG1-202ENST00000399793 SETD1BQ9UPS6 1966 aaKnown RBP9.99□□□□□ -0.81
RETREG1-202ENST00000399793 SHTN1A0MZ66 631 aa9.99□□□□□ -0.81
RETREG1-202ENST00000399793 GOLGA6L9A6NEM1 432 aa9.99□□□□□ -0.81
RETREG1-202ENST00000399793 KINO60870 393 aaKnown RBP9.99□□□□□ -0.81
RETREG1-202ENST00000399793 CHGAP10645 457 aaKnown RBP9.99□□□□□ -0.81
RETREG1-202ENST00000399793 AARSP49588 968 aaKnown RBP eCLIP9.99□□□□□ -0.81
RETREG1-202ENST00000399793 CEBPZQ03701 1054 aaKnown RBP9.99□□□□□ -0.81
RETREG1-202ENST00000399793 RIN2Q8WYP3 895 aaPredicted RBP9.99□□□□□ -0.81
RETREG1-202ENST00000399793 HECW2Q9P2P5 1572 aa9.99□□□□□ -0.81
RETREG1-202ENST00000399793 ARHGAP6O43182 974 aa9.99□□□□□ -0.81
RETREG1-202ENST00000399793 MAP4K4O95819 1239 aaPredicted RBP9.99□□□□□ -0.81
RETREG1-202ENST00000399793 ICA1Q05084 483 aa9.99□□□□□ -0.81
RETREG1-202ENST00000399793 PARD3BQ8TEW8 1205 aa9.99□□□□□ -0.81
RETREG1-202ENST00000399793 DDX20Q9UHI6 824 aaKnown RBP9.99□□□□□ -0.81
RETREG1-202ENST00000399793 SBNO2Q9Y2G9 1366 aa9.99□□□□□ -0.81
RETREG1-202ENST00000399793 TRAF1Q13077 416 aa9.98□□□□□ -0.81
RETREG1-202ENST00000399793 NAA25Q14CX7 972 aa9.98□□□□□ -0.81
RETREG1-202ENST00000399793 DPCR1Q3MIW9 517 aa9.98□□□□□ -0.81
RETREG1-202ENST00000399793 CEP85LQ5SZL2 805 aa9.98□□□□□ -0.81
RETREG1-202ENST00000399793 CCDC73Q6ZRK6 1079 aa9.98□□□□□ -0.81
RETREG1-202ENST00000399793 CEP57Q86XR8 500 aa9.98□□□□□ -0.81
RETREG1-202ENST00000399793 NUTM1Q86Y26 1132 aa9.98□□□□□ -0.81
RETREG1-202ENST00000399793 TMEM139Q8IV31 216 aa9.98□□□□□ -0.81
RETREG1-202ENST00000399793 STAP2Q9UGK3 403 aa9.98□□□□□ -0.81
RETREG1-202ENST00000399793 SPG7Q9UQ90 795 aa9.98□□□□□ -0.81
RETREG1-202ENST00000399793 CYP46A1Q9Y6A2 500 aa9.98□□□□□ -0.81
RETREG1-202ENST00000399793 GIGYF1O75420 1035 aaPredicted RBP9.98□□□□□ -0.81
RETREG1-202ENST00000399793 FANCCQ00597 558 aa9.98□□□□□ -0.81
RETREG1-202ENST00000399793 KARSQ15046 597 aaKnown RBP9.98□□□□□ -0.81
RETREG1-202ENST00000399793 IRX2Q9BZI1 471 aaPredicted RBP9.98□□□□□ -0.81
RETREG1-202ENST00000399793 CENPHQ9H3R5 247 aa9.98□□□□□ -0.81
RETREG1-202ENST00000399793 NSD2O96028 1365 aa9.98□□□□□ -0.81
RETREG1-202ENST00000399793 DIAPH1O60610 1272 aaKnown RBP9.98□□□□□ -0.81
RETREG1-202ENST00000399793 KIAA0754O94854 1291 aa9.98□□□□□ -0.81
RETREG1-202ENST00000399793 LMOD1P29536 600 aaPredicted RBP9.98□□□□□ -0.81
RETREG1-202ENST00000399793 PRKAR2BP31323 418 aa9.98□□□□□ -0.81
RETREG1-202ENST00000399793 SNX1Q13596 522 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms