RNA–Protein interactions for RNA: ENST00000399537.8

TNRC18-203, Transcript of trinucleotide repeat containing 18, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNRC18, Length 10,572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-203ENST00000399537 STX8Q9UNK0 236 aa16.32■□□□□ 0.2
TNRC18-203ENST00000399537 RTL9Q8NET4 1388 aa16.31■□□□□ 0.2
TNRC18-203ENST00000399537 FAM13AO94988 1023 aa16.31■□□□□ 0.2
TNRC18-203ENST00000399537 PLS1Q14651 629 aa16.31■□□□□ 0.2
TNRC18-203ENST00000399537 SMC1BQ8NDV3 1235 aa16.31■□□□□ 0.2
TNRC18-203ENST00000399537 GTPBP4Q9BZE4 634 aaKnown RBP16.31■□□□□ 0.2
TNRC18-203ENST00000399537 VTI1AQ96AJ9 217 aa16.31■□□□□ 0.2
TNRC18-203ENST00000399537 ZKSCAN5Q9Y2L8 839 aa16.31■□□□□ 0.2
TNRC18-203ENST00000399537 ATP2A2P16615 1042 aaKnown RBP16.31■□□□□ 0.2
TNRC18-203ENST00000399537 NAPAP54920 295 aa16.31■□□□□ 0.2
TNRC18-203ENST00000399537 WDR70Q9NW82 654 aa16.31■□□□□ 0.2
TNRC18-203ENST00000399537 SNX16P57768 344 aa16.31■□□□□ 0.2
TNRC18-203ENST00000399537 CNNM2Q9H8M5 875 aa16.31■□□□□ 0.2
TNRC18-203ENST00000399537 CCDC186Q7Z3E2 898 aa16.31■□□□□ 0.2
TNRC18-203ENST00000399537 ALG1Q9BT22 464 aa16.31■□□□□ 0.2
TNRC18-203ENST00000399537 ATP5J2-PTCD1G3V325 749 aa16.3■□□□□ 0.2
TNRC18-203ENST00000399537 PSMA7O14818 248 aa16.3■□□□□ 0.2
TNRC18-203ENST00000399537 CCDC152Q4G0S7 254 aa16.3■□□□□ 0.2
TNRC18-203ENST00000399537 UBXN1Q04323 297 aa16.3■□□□□ 0.2
TNRC18-203ENST00000399537 NBPF7P0C2Y1 421 aaPredicted RBP16.3■□□□□ 0.2
TNRC18-203ENST00000399537 DNAJC25Q9H1X3 360 aa16.3■□□□□ 0.2
TNRC18-203ENST00000399537 IL16Q14005 1332 aa16.3■□□□□ 0.2
TNRC18-203ENST00000399537 SLU7O95391 586 aaKnown RBP16.3■□□□□ 0.2
TNRC18-203ENST00000399537 PRIM1P49642 420 aaKnown RBP16.3■□□□□ 0.2
TNRC18-203ENST00000399537 HS1BP3Q53T59 392 aa16.3■□□□□ 0.2
TNRC18-203ENST00000399537 CEP57Q86XR8 500 aa16.3■□□□□ 0.2
TNRC18-203ENST00000399537 LRRC2Q9BYS8 371 aa16.3■□□□□ 0.2
TNRC18-203ENST00000399537 SPAG1Q07617 926 aa16.3■□□□□ 0.2
TNRC18-203ENST00000399537 JAKMIP2Q96AA8 810 aa16.3■□□□□ 0.2
TNRC18-203ENST00000399537 CCDC25Q86WR0 208 aa16.29■□□□□ 0.2
TNRC18-203ENST00000399537 CAPN2P17655 700 aa16.29■□□□□ 0.2
TNRC18-203ENST00000399537 RPUSD2Q8IZ73 545 aaKnown RBP16.29■□□□□ 0.2
TNRC18-203ENST00000399537 MARCKSP29966 332 aaPredicted RBP16.29■□□□□ 0.2
TNRC18-203ENST00000399537 MSANTD4Q8NCY6 345 aa16.29■□□□□ 0.2
TNRC18-203ENST00000399537 MAK16Q9BXY0 300 aaKnown RBP16.29■□□□□ 0.2
TNRC18-203ENST00000399537 WAPLQ7Z5K2 1190 aa16.29■□□□□ 0.2
TNRC18-203ENST00000399537 TSGA10Q9BZW7 698 aa16.29■□□□□ 0.2
TNRC18-203ENST00000399537 CEP83Q9Y592 693 aa16.29■□□□□ 0.2
TNRC18-203ENST00000399537 CRCPO75575 148 aa16.29■□□□□ 0.2
TNRC18-203ENST00000399537 PPP1R7Q15435 360 aa16.29■□□□□ 0.2
TNRC18-203ENST00000399537 NEK11Q8NG66 645 aa16.29■□□□□ 0.2
TNRC18-203ENST00000399537 CCDC114Q96M63 670 aa16.29■□□□□ 0.2
TNRC18-203ENST00000399537 ZGPATQ8N5A5 531 aaKnown RBP16.29■□□□□ 0.2
TNRC18-203ENST00000399537 RAPGEF6Q8TEU7 1601 aa16.29■□□□□ 0.2
TNRC18-203ENST00000399537 TTC31Q49AM3 519 aaPredicted RBP16.29■□□□□ 0.2
TNRC18-203ENST00000399537 ESR2Q92731 530 aa16.29■□□□□ 0.2
TNRC18-203ENST00000399537 ZNF622Q969S3 477 aaKnown RBP eCLIP16.29■□□□□ 0.24e-6■■■□□ 15.8
TNRC18-203ENST00000399537 GMNNO75496 209 aa16.29■□□□□ 0.2
TNRC18-203ENST00000399537 ALDH3A1P30838 453 aa16.29■□□□□ 0.2
TNRC18-203ENST00000399537 MKRN1Q9UHC7 482 aaKnown RBP16.29■□□□□ 0.2
TNRC18-203ENST00000399537 PLCB3Q01970 1234 aa16.28■□□□□ 0.2
TNRC18-203ENST00000399537 ADGBQ8N7X0 1667 aa16.28■□□□□ 0.2
TNRC18-203ENST00000399537 CIB2O75838 187 aa16.28■□□□□ 0.2
TNRC18-203ENST00000399537 TXNDC16Q9P2K2 825 aa16.28■□□□□ 0.2
TNRC18-203ENST00000399537 KIAA1524Q8TCG1 905 aa16.28■□□□□ 0.2
TNRC18-203ENST00000399537 KIF21AQ7Z4S6 1674 aa16.28■□□□□ 0.2
TNRC18-203ENST00000399537 BICDL2A1A5D9 508 aa16.28■□□□□ 0.2
TNRC18-203ENST00000399537 F13A1P00488 732 aa16.28■□□□□ 0.2
TNRC18-203ENST00000399537 SEC62Q99442 399 aaKnown RBP16.28■□□□□ 0.2
TNRC18-203ENST00000399537 C6orf50Q9HD87 102 aa16.28■□□□□ 0.2
TNRC18-203ENST00000399537 DNM1Q05193 864 aaKnown RBP16.28■□□□□ 0.2
TNRC18-203ENST00000399537 KIF5AQ12840 1032 aa16.28■□□□□ 0.2
TNRC18-203ENST00000399537 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.28■□□□□ 0.22e-7■■■□□ 17
TNRC18-203ENST00000399537 NOS1P29475 1434 aa16.28■□□□□ 0.2
TNRC18-203ENST00000399537 MAP3K9P80192 1104 aa16.28■□□□□ 0.2
TNRC18-203ENST00000399537 SAMD15Q9P1V8 674 aa16.28■□□□□ 0.2
TNRC18-203ENST00000399537 SLC4A4Q9Y6R1 1079 aa16.28■□□□□ 0.2
TNRC18-203ENST00000399537 IFT81Q8WYA0 676 aa16.28■□□□□ 0.2
TNRC18-203ENST00000399537 RAPGEF3O95398 923 aa16.27■□□□□ 0.2
TNRC18-203ENST00000399537 C8orf34Q49A92 452 aa16.27■□□□□ 0.2
TNRC18-203ENST00000399537 DNAJC21Q5F1R6 531 aaKnown RBP16.27■□□□□ 0.2
TNRC18-203ENST00000399537 FAM212AQ96EL1 285 aa16.27■□□□□ 0.2
TNRC18-203ENST00000399537 NCBP1Q09161 790 aaKnown RBP16.27■□□□□ 0.2
TNRC18-203ENST00000399537 LDHAL6AQ6ZMR3 332 aa16.27■□□□□ 0.2
TNRC18-203ENST00000399537 VPS18Q9P253 973 aa16.27■□□□□ 0.2
TNRC18-203ENST00000399537 RAB3GAP1Q15042 981 aa16.27■□□□□ 0.2
TNRC18-203ENST00000399537 SMARCC2Q8TAQ2 1214 aa16.27■□□□□ 0.2
TNRC18-203ENST00000399537 ANKRD36BQ8N2N9 1353 aa16.27■□□□□ 0.2
TNRC18-203ENST00000399537 SNX21Q969T3 373 aa16.27■□□□□ 0.2
TNRC18-203ENST00000399537 TRIM7Q9C029 511 aa16.27■□□□□ 0.2
TNRC18-203ENST00000399537 KRT86O43790 486 aa16.27■□□□□ 0.19
TNRC18-203ENST00000399537 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.27■□□□□ 0.19
TNRC18-203ENST00000399537 CYP7A1P22680 504 aa16.27■□□□□ 0.19
TNRC18-203ENST00000399537 KRT83P78385 493 aa16.27■□□□□ 0.19
TNRC18-203ENST00000399537 KCNK9Q9NPC2 374 aa16.27■□□□□ 0.19
TNRC18-203ENST00000399537 ADGRL1O94910 1474 aa16.26■□□□□ 0.19
TNRC18-203ENST00000399537 WDR66Q8TBY9 1149 aa16.26■□□□□ 0.19
TNRC18-203ENST00000399537 Q6ZUG5 572 aa16.26■□□□□ 0.19
TNRC18-203ENST00000399537 GAS8O95995 478 aa16.26■□□□□ 0.19
TNRC18-203ENST00000399537 ZEB2O60315 1214 aa16.26■□□□□ 0.19
TNRC18-203ENST00000399537 KRT2P35908 639 aa16.26■□□□□ 0.19
TNRC18-203ENST00000399537 GTF3C6Q969F1 213 aa16.26■□□□□ 0.19
TNRC18-203ENST00000399537 TEX13AQ9BXU3 409 aaPredicted RBP16.26■□□□□ 0.19
TNRC18-203ENST00000399537 ATP6V0A2Q9Y487 856 aa16.26■□□□□ 0.19
TNRC18-203ENST00000399537 UQCRFS1P1P0C7P4 283 aa16.26■□□□□ 0.19
TNRC18-203ENST00000399537 RFC4P35249 363 aa16.26■□□□□ 0.19
TNRC18-203ENST00000399537 SETDB1Q15047 1291 aa16.26■□□□□ 0.19
TNRC18-203ENST00000399537 ZNF804AQ7Z570 1209 aa16.26■□□□□ 0.19
TNRC18-203ENST00000399537 CPLX4Q7Z7G2 160 aa16.26■□□□□ 0.19
TNRC18-203ENST00000399537 GUCA1BQ9UMX6 200 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms