RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 TOM1O60784 492 aa20.97■□□□□ 0.95
HLA-DQB1-204ENST00000399084 PFKFB2O60825 505 aa20.97■□□□□ 0.95
HLA-DQB1-204ENST00000399084 KRT85P78386 507 aa20.97■□□□□ 0.95
HLA-DQB1-204ENST00000399084 HMGN5P82970 282 aaKnown RBP20.97■□□□□ 0.95
HLA-DQB1-204ENST00000399084 FGD1P98174 961 aa20.97■□□□□ 0.95
HLA-DQB1-204ENST00000399084 HS1BP3Q53T59 392 aa20.97■□□□□ 0.95
HLA-DQB1-204ENST00000399084 ZNF274Q96GC6 653 aaPredicted RBP20.97■□□□□ 0.95
HLA-DQB1-204ENST00000399084 ZNF831Q5JPB2 1677 aa20.97■□□□□ 0.95
HLA-DQB1-204ENST00000399084 SLIT2O94813 1529 aa20.97■□□□□ 0.95
HLA-DQB1-204ENST00000399084 WDR19Q8NEZ3 1342 aa20.97■□□□□ 0.95
HLA-DQB1-204ENST00000399084 LOC102724428A0A0B4J2F2 783 aa20.96■□□□□ 0.95
HLA-DQB1-204ENST00000399084 SIK1P57059 783 aa20.96■□□□□ 0.95
HLA-DQB1-204ENST00000399084 CCDC183Q5T5S1 534 aa20.96■□□□□ 0.95
HLA-DQB1-204ENST00000399084 LPIN2Q92539 896 aa20.96■□□□□ 0.95
HLA-DQB1-204ENST00000399084 UTP14AQ9BVJ6 771 aaKnown RBP20.96■□□□□ 0.95
HLA-DQB1-204ENST00000399084 SCAND2PQ9GZW5 306 aaPredicted RBP20.96■□□□□ 0.95
HLA-DQB1-204ENST00000399084 TAF6LQ9Y6J9 622 aa20.96■□□□□ 0.95
HLA-DQB1-204ENST00000399084 ATP6V1AP38606 617 aa20.95■□□□□ 0.94
HLA-DQB1-204ENST00000399084 EVCP57679 992 aa20.95■□□□□ 0.94
HLA-DQB1-204ENST00000399084 UBE3CQ15386 1083 aa20.95■□□□□ 0.94
HLA-DQB1-204ENST00000399084 PUM3Q15397 648 aaKnown RBP20.95■□□□□ 0.94
HLA-DQB1-204ENST00000399084 IMMTQ16891 758 aaKnown RBP20.95■□□□□ 0.94
HLA-DQB1-204ENST00000399084 CLEC4GQ6UXB4 293 aa20.95■□□□□ 0.94
HLA-DQB1-204ENST00000399084 RGS22Q8NE09 1264 aa20.95■□□□□ 0.94
HLA-DQB1-204ENST00000399084 ZSCAN16Q9H4T2 348 aaPredicted RBP20.95■□□□□ 0.94
HLA-DQB1-204ENST00000399084 TBC1D2BQ9UPU7 963 aa20.95■□□□□ 0.94
HLA-DQB1-204ENST00000399084 CNPY2Q9Y2B0 182 aa20.95■□□□□ 0.94
HLA-DQB1-204ENST00000399084 ZNF652Q9Y2D9 606 aa20.95■□□□□ 0.94
HLA-DQB1-204ENST00000399084 VPS37CA5D8V6 355 aaPredicted RBP20.95■□□□□ 0.94
HLA-DQB1-204ENST00000399084 E7EWF7 191 aa20.95■□□□□ 0.94
HLA-DQB1-204ENST00000399084 ARID4AP29374 1257 aaPredicted RBP20.95■□□□□ 0.94
HLA-DQB1-204ENST00000399084 ADORA1P30542 326 aa20.95■□□□□ 0.94
HLA-DQB1-204ENST00000399084 CRKLP46109 303 aaKnown RBP20.95■□□□□ 0.94
HLA-DQB1-204ENST00000399084 OSBP2Q969R2 916 aa20.95■□□□□ 0.94
HLA-DQB1-204ENST00000399084 SYCE3A1L190 88 aa20.94■□□□□ 0.94
HLA-DQB1-204ENST00000399084 ADAMTS2O95450 1211 aa20.94■□□□□ 0.94
HLA-DQB1-204ENST00000399084 MARCH10Q8NA82 808 aaPredicted RBP20.94■□□□□ 0.94
HLA-DQB1-204ENST00000399084 SMARCC2Q8TAQ2 1214 aa20.94■□□□□ 0.94
HLA-DQB1-204ENST00000399084 TSPY26PQ9H489 355 aa20.94■□□□□ 0.94
HLA-DQB1-204ENST00000399084 RBM27Q9P2N5 1060 aaKnown RBP20.94■□□□□ 0.94
HLA-DQB1-204ENST00000399084 NSFL1CQ9UNZ2 370 aaKnown RBP20.94■□□□□ 0.94
HLA-DQB1-204ENST00000399084 CCDC9Q9Y3X0 531 aaKnown RBP20.94■□□□□ 0.94
HLA-DQB1-204ENST00000399084 LRP5O75197 1615 aa20.94■□□□□ 0.94
HLA-DQB1-204ENST00000399084 ZAP70P43403 619 aa20.93■□□□□ 0.94
HLA-DQB1-204ENST00000399084 WASHC4Q2M389 1173 aa20.93■□□□□ 0.94
HLA-DQB1-204ENST00000399084 UVSSAQ2YD98 709 aa20.93■□□□□ 0.94
HLA-DQB1-204ENST00000399084 UBN2Q6ZU65 1347 aa20.93■□□□□ 0.94
HLA-DQB1-204ENST00000399084 ATRNO75882 1429 aa20.93■□□□□ 0.94
HLA-DQB1-204ENST00000399084 KAT6BQ8WYB5 2073 aa20.93■□□□□ 0.94
HLA-DQB1-204ENST00000399084 CCDC152Q4G0S7 254 aa20.92■□□□□ 0.94
HLA-DQB1-204ENST00000399084 ATL3Q6DD88 541 aa20.92■□□□□ 0.94
HLA-DQB1-204ENST00000399084 CHAMP1Q96JM3 812 aa20.92■□□□□ 0.94
HLA-DQB1-204ENST00000399084 RBSNQ9H1K0 784 aa20.92■□□□□ 0.94
HLA-DQB1-204ENST00000399084 TCHHQ07283 1943 aa20.92■□□□□ 0.94
HLA-DQB1-204ENST00000399084 GADD45BO75293 160 aaPredicted RBP20.92■□□□□ 0.94
HLA-DQB1-204ENST00000399084 CAMTA2O94983 1202 aa20.92■□□□□ 0.94
HLA-DQB1-204ENST00000399084 FGFR2P21802 821 aa20.92■□□□□ 0.94
HLA-DQB1-204ENST00000399084 NAA16Q6N069 864 aaPredicted RBP20.92■□□□□ 0.94
HLA-DQB1-204ENST00000399084 STOX1Q6ZVD7 989 aa20.92■□□□□ 0.94
HLA-DQB1-204ENST00000399084 BRF1Q92994 677 aa20.92■□□□□ 0.94
HLA-DQB1-204ENST00000399084 M0R2C6 588 aa20.91■□□□□ 0.94
HLA-DQB1-204ENST00000399084 SLC5A1P13866 664 aa20.91■□□□□ 0.94
HLA-DQB1-204ENST00000399084 DNM1Q05193 864 aaKnown RBP20.91■□□□□ 0.94
HLA-DQB1-204ENST00000399084 SYNE4Q8N205 404 aa20.91■□□□□ 0.94
HLA-DQB1-204ENST00000399084 TCEANC2Q96MN5 208 aa20.91■□□□□ 0.94
HLA-DQB1-204ENST00000399084 DHX16O60231 1041 aaKnown RBP20.9■□□□□ 0.94
HLA-DQB1-204ENST00000399084 ADD2P35612 726 aa20.9■□□□□ 0.94
HLA-DQB1-204ENST00000399084 SUSD4Q5VX71 490 aa20.9■□□□□ 0.94
HLA-DQB1-204ENST00000399084 PDLIM2Q96JY6 352 aa20.9■□□□□ 0.94
HLA-DQB1-204ENST00000399084 CCDC85AQ96PX6 553 aaPredicted RBP20.9■□□□□ 0.94
HLA-DQB1-204ENST00000399084 GDPD2Q9HCC8 539 aa20.9■□□□□ 0.94
HLA-DQB1-204ENST00000399084 MYH7P12883 1935 aa20.9■□□□□ 0.94
HLA-DQB1-204ENST00000399084 MCAMP43121 646 aa20.9■□□□□ 0.94
HLA-DQB1-204ENST00000399084 MPHOSPH8Q99549 860 aa20.9■□□□□ 0.94
HLA-DQB1-204ENST00000399084 CFAP45Q9UL16 551 aa20.9■□□□□ 0.94
HLA-DQB1-204ENST00000399084 FIBPO43427 364 aa20.89■□□□□ 0.93
HLA-DQB1-204ENST00000399084 CHGBP05060 677 aa20.89■□□□□ 0.93
HLA-DQB1-204ENST00000399084 MCM5P33992 734 aa20.89■□□□□ 0.93
HLA-DQB1-204ENST00000399084 SCARF1Q14162 830 aa20.89■□□□□ 0.93
HLA-DQB1-204ENST00000399084 CCDC102BQ68D86 513 aa20.89■□□□□ 0.93
HLA-DQB1-204ENST00000399084 AKAP11Q9UKA4 1901 aa20.88■□□□□ 0.93
HLA-DQB1-204ENST00000399084 ZMYM6O95789 1325 aa20.88■□□□□ 0.93
HLA-DQB1-204ENST00000399084 FGAP02671 866 aa20.88■□□□□ 0.93
HLA-DQB1-204ENST00000399084 CLCN1P35523 988 aa20.88■□□□□ 0.93
HLA-DQB1-204ENST00000399084 ALX1Q15699 326 aa20.88■□□□□ 0.93
HLA-DQB1-204ENST00000399084 NCOA7Q8NI08 942 aa20.88■□□□□ 0.93
HLA-DQB1-204ENST00000399084 ARAP2Q8WZ64 1704 aa20.88■□□□□ 0.93
HLA-DQB1-204ENST00000399084 H3BQV1 296 aa20.87■□□□□ 0.93
HLA-DQB1-204ENST00000399084 ZNF213O14771 459 aa20.87■□□□□ 0.93
HLA-DQB1-204ENST00000399084 GPAA1O43292 621 aa20.87■□□□□ 0.93
HLA-DQB1-204ENST00000399084 IGHMBP2P38935 993 aaKnown RBP20.87■□□□□ 0.93
HLA-DQB1-204ENST00000399084 SCRN1Q12765 414 aa20.87■□□□□ 0.93
HLA-DQB1-204ENST00000399084 STK3Q13188 491 aa20.87■□□□□ 0.93
HLA-DQB1-204ENST00000399084 COL9A3Q14050 684 aaPredicted RBP20.87■□□□□ 0.93
HLA-DQB1-204ENST00000399084 FOXD4L6Q3SYB3 417 aaPredicted RBP20.87■□□□□ 0.93
HLA-DQB1-204ENST00000399084 IFFO2Q5TF58 517 aa20.87■□□□□ 0.93
HLA-DQB1-204ENST00000399084 FOXD4L3Q6VB84 417 aaPredicted RBP20.87■□□□□ 0.93
HLA-DQB1-204ENST00000399084 CDC37L1Q7L3B6 337 aa20.87■□□□□ 0.93
HLA-DQB1-204ENST00000399084 CDC5LQ99459 802 aaKnown RBP20.87■□□□□ 0.93
HLA-DQB1-204ENST00000399084 LAMA4Q16363 1823 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms