RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 SCN9AQ15858 1988 aa15.38■□□□□ 0.05
HLA-DQB1-203ENST00000399082 PPIP5K2O43314 1243 aa15.38■□□□□ 0.05
HLA-DQB1-203ENST00000399082 IGHDP01880 384 aa15.38■□□□□ 0.05
HLA-DQB1-203ENST00000399082 G3BP1Q13283 466 aaKnown RBP eCLIP15.38■□□□□ 0.05
HLA-DQB1-203ENST00000399082 UBE4AQ14139 1066 aa15.38■□□□□ 0.05
HLA-DQB1-203ENST00000399082 C15orf52Q6ZUT6 534 aaKnown RBP15.38■□□□□ 0.05
HLA-DQB1-203ENST00000399082 SUPT20HQ8NEM7 779 aa15.38■□□□□ 0.05
HLA-DQB1-203ENST00000399082 DCTPP1Q9H773 170 aa15.38■□□□□ 0.05
HLA-DQB1-203ENST00000399082 CEP126Q9P2H0 1117 aa15.38■□□□□ 0.05
HLA-DQB1-203ENST00000399082 RIMBP2O15034 1052 aa15.37■□□□□ 0.05
HLA-DQB1-203ENST00000399082 PUM3Q15397 648 aaKnown RBP15.37■□□□□ 0.05
HLA-DQB1-203ENST00000399082 WASHC4Q2M389 1173 aa15.37■□□□□ 0.05
HLA-DQB1-203ENST00000399082 VPS33BQ9H267 617 aa15.37■□□□□ 0.05
HLA-DQB1-203ENST00000399082 RNF181Q9P0P0 153 aa15.37■□□□□ 0.05
HLA-DQB1-203ENST00000399082 YDJCA8MPS7 323 aa15.36■□□□□ 0.05
HLA-DQB1-203ENST00000399082 ADORA1P30542 326 aa15.36■□□□□ 0.05
HLA-DQB1-203ENST00000399082 ATP2B3Q16720 1220 aa15.36■□□□□ 0.05
HLA-DQB1-203ENST00000399082 LARGE2Q8N3Y3 721 aa15.36■□□□□ 0.05
HLA-DQB1-203ENST00000399082 RHPN1Q8TCX5 695 aa15.36■□□□□ 0.05
HLA-DQB1-203ENST00000399082 EYA3Q99504 573 aa15.36■□□□□ 0.05
HLA-DQB1-203ENST00000399082 PSME4Q14997 1843 aa15.36■□□□□ 0.05
HLA-DQB1-203ENST00000399082 KCNJ4P48050 445 aa15.35■□□□□ 0.05
HLA-DQB1-203ENST00000399082 TIMM10P62072 90 aa15.35■□□□□ 0.05
HLA-DQB1-203ENST00000399082 DOK7Q18PE1 504 aa15.35■□□□□ 0.05
HLA-DQB1-203ENST00000399082 DBNDD1Q9H9R9 158 aa15.35■□□□□ 0.05
HLA-DQB1-203ENST00000399082 A0A1B0GUL7 405 aa15.34■□□□□ 0.05
HLA-DQB1-203ENST00000399082 FZD9O00144 591 aa15.34■□□□□ 0.05
HLA-DQB1-203ENST00000399082 APBB1O00213 710 aa15.34■□□□□ 0.05
HLA-DQB1-203ENST00000399082 GYG1P46976 350 aa15.34■□□□□ 0.05
HLA-DQB1-203ENST00000399082 OS9Q13438 667 aaPredicted RBP15.34■□□□□ 0.05
HLA-DQB1-203ENST00000399082 TNNI3KQ59H18 835 aa15.34■□□□□ 0.05
HLA-DQB1-203ENST00000399082 LPIN2Q92539 896 aa15.34■□□□□ 0.05
HLA-DQB1-203ENST00000399082 EAF2Q96CJ1 260 aaPredicted RBP15.34■□□□□ 0.05
HLA-DQB1-203ENST00000399082 FAM84BQ96KN1 310 aaPredicted RBP15.34■□□□□ 0.05
HLA-DQB1-203ENST00000399082 ZC3H12CQ9C0D7 883 aaKnown RBP15.34■□□□□ 0.05
HLA-DQB1-203ENST00000399082 IL1RAPL2Q9NP60 686 aa15.34■□□□□ 0.05
HLA-DQB1-203ENST00000399082 GPR108Q9NPR9 543 aa15.34■□□□□ 0.05
HLA-DQB1-203ENST00000399082 FPGT-TNNI3KV9GXZ4 949 aa15.34■□□□□ 0.05
HLA-DQB1-203ENST00000399082 ZNF541Q9H0D2 1346 aa15.34■□□□□ 0.05
HLA-DQB1-203ENST00000399082 SMARCA5O60264 1052 aaPredicted RBP15.33■□□□□ 0.04
HLA-DQB1-203ENST00000399082 ECE2O60344 883 aa15.33■□□□□ 0.04
HLA-DQB1-203ENST00000399082 RAB11FIP3O75154 756 aa15.33■□□□□ 0.04
HLA-DQB1-203ENST00000399082 HSP90AB4PQ58FF6 505 aa15.33■□□□□ 0.04
HLA-DQB1-203ENST00000399082 FBXO33Q7Z6M2 555 aa15.33■□□□□ 0.04
HLA-DQB1-203ENST00000399082 ERC1Q8IUD2 1116 aa15.33■□□□□ 0.04
HLA-DQB1-203ENST00000399082 KIF1BPQ96EK5 621 aa15.33■□□□□ 0.04
HLA-DQB1-203ENST00000399082 KCNQ5Q9NR82 932 aa15.33■□□□□ 0.04
HLA-DQB1-203ENST00000399082 TLR7Q9NYK1 1049 aaKnown RBP15.33■□□□□ 0.04
HLA-DQB1-203ENST00000399082 COL1A1P02452 1464 aaPredicted RBP15.33■□□□□ 0.04
HLA-DQB1-203ENST00000399082 SLC5A1P13866 664 aa15.32■□□□□ 0.04
HLA-DQB1-203ENST00000399082 BCAMP50895 628 aa15.32■□□□□ 0.04
HLA-DQB1-203ENST00000399082 SMC5Q8IY18 1101 aa15.32■□□□□ 0.04
HLA-DQB1-203ENST00000399082 NIM1KQ8IY84 436 aa15.32■□□□□ 0.04
HLA-DQB1-203ENST00000399082 COA1Q9GZY4 146 aa15.32■□□□□ 0.04
HLA-DQB1-203ENST00000399082 CD209Q9NNX6 404 aa15.32■□□□□ 0.04
HLA-DQB1-203ENST00000399082 ZNRF3Q9ULT6 936 aa15.32■□□□□ 0.04
HLA-DQB1-203ENST00000399082 IFIT1P09914 478 aaKnown RBP15.31■□□□□ 0.04
HLA-DQB1-203ENST00000399082 PHKA1P46020 1223 aa15.31■□□□□ 0.04
HLA-DQB1-203ENST00000399082 XAGE2Q96GT9 111 aa15.31■□□□□ 0.04
HLA-DQB1-203ENST00000399082 DBNDD2Q9BQY9 259 aa15.31■□□□□ 0.04
HLA-DQB1-203ENST00000399082 RWDD1Q9H446 243 aaPredicted RBP15.31■□□□□ 0.04
HLA-DQB1-203ENST00000399082 DBNLQ9UJU6 430 aaKnown RBP15.31■□□□□ 0.04
HLA-DQB1-203ENST00000399082 AKAP2Q9Y2D5 859 aa15.31■□□□□ 0.04
HLA-DQB1-203ENST00000399082 NEFLP07196 543 aa15.3■□□□□ 0.04
HLA-DQB1-203ENST00000399082 IL1R1P14778 569 aa15.3■□□□□ 0.04
HLA-DQB1-203ENST00000399082 CXCL9Q07325 125 aa15.3■□□□□ 0.04
HLA-DQB1-203ENST00000399082 TDRD7Q8NHU6 1098 aaKnown RBP15.3■□□□□ 0.04
HLA-DQB1-203ENST00000399082 JDP2Q8WYK2 163 aa15.3■□□□□ 0.04
HLA-DQB1-203ENST00000399082 LRRCC1Q9C099 1032 aa15.3■□□□□ 0.04
HLA-DQB1-203ENST00000399082 CCDC8Q9H0W5 538 aaPredicted RBP15.3■□□□□ 0.04
HLA-DQB1-203ENST00000399082 ZC3H4Q9UPT8 1303 aaKnown RBP15.3■□□□□ 0.04
HLA-DQB1-203ENST00000399082 MYH13Q9UKX3 1938 aa15.29■□□□□ 0.04
HLA-DQB1-203ENST00000399082 RAD17O75943 681 aa15.29■□□□□ 0.04
HLA-DQB1-203ENST00000399082 HIBADHP31937 336 aaKnown RBP15.29■□□□□ 0.04
HLA-DQB1-203ENST00000399082 CCDC102BQ68D86 513 aa15.29■□□□□ 0.04
HLA-DQB1-203ENST00000399082 ZNF804AQ7Z570 1209 aa15.29■□□□□ 0.04
HLA-DQB1-203ENST00000399082 PODNQ7Z5L7 613 aa15.29■□□□□ 0.04
HLA-DQB1-203ENST00000399082 AACSQ86V21 672 aa15.29■□□□□ 0.04
HLA-DQB1-203ENST00000399082 GCC1Q96CN9 775 aa15.29■□□□□ 0.04
HLA-DQB1-203ENST00000399082 IQSEC3Q9UPP2 1182 aaPredicted RBP15.29■□□□□ 0.04
HLA-DQB1-203ENST00000399082 AKAP11Q9UKA4 1901 aa15.29■□□□□ 0.04
HLA-DQB1-203ENST00000399082 KDM2BQ8NHM5 1336 aa15.28■□□□□ 0.04
HLA-DQB1-203ENST00000399082 NEUROD6Q96NK8 337 aa15.28■□□□□ 0.04
HLA-DQB1-203ENST00000399082 SALL3Q9BXA9 1300 aa15.27■□□□□ 0.04
HLA-DQB1-203ENST00000399082 PSMD14O00487 310 aa15.27■□□□□ 0.04
HLA-DQB1-203ENST00000399082 ZBTB22O15209 634 aa15.27■□□□□ 0.04
HLA-DQB1-203ENST00000399082 SCARF1Q14162 830 aa15.27■□□□□ 0.04
HLA-DQB1-203ENST00000399082 CAVIN4Q5BKX8 364 aa15.27■□□□□ 0.04
HLA-DQB1-203ENST00000399082 DACT2Q5SW24 774 aa15.27■□□□□ 0.04
HLA-DQB1-203ENST00000399082 CLASRPQ8N2M8 674 aaKnown RBP15.27■□□□□ 0.04
HLA-DQB1-203ENST00000399082 OTUD7AQ8TE49 926 aaPredicted RBP15.27■□□□□ 0.04
HLA-DQB1-203ENST00000399082 MXD3Q9BW11 206 aa15.27■□□□□ 0.04
HLA-DQB1-203ENST00000399082 FAM205AQ6ZU69 1335 aa15.26■□□□□ 0.03
HLA-DQB1-203ENST00000399082 DDNO94850 711 aaPredicted RBP15.26■□□□□ 0.03
HLA-DQB1-203ENST00000399082 ARID4AP29374 1257 aaPredicted RBP15.26■□□□□ 0.03
HLA-DQB1-203ENST00000399082 RASGRF1Q13972 1273 aa15.26■□□□□ 0.03
HLA-DQB1-203ENST00000399082 CIAPIN1Q6FI81 312 aa15.26■□□□□ 0.03
HLA-DQB1-203ENST00000399082 SAMD1Q6SPF0 538 aaPredicted RBP15.26■□□□□ 0.03
HLA-DQB1-203ENST00000399082 C16orf71Q8IYS4 520 aaPredicted RBP15.26■□□□□ 0.03
HLA-DQB1-203ENST00000399082 CERS5Q8N5B7 392 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms