RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 SCARF1Q14162 830 aa13.37□□□□□ -0.27
RCC1-204ENST00000398958 MAP4K1Q92918 833 aa13.37□□□□□ -0.27
RCC1-204ENST00000398958 WWC3Q9ULE0 1092 aa13.37□□□□□ -0.27
RCC1-204ENST00000398958 ITGA6P23229 1130 aa13.36□□□□□ -0.27
RCC1-204ENST00000398958 AFDNP55196 1824 aaKnown RBP13.36□□□□□ -0.27
RCC1-204ENST00000398958 COL14A1Q05707 1796 aaKnown RBP13.36□□□□□ -0.27
RCC1-204ENST00000398958 ATG9AQ7Z3C6 839 aa13.36□□□□□ -0.27
RCC1-204ENST00000398958 SPC24Q8NBT2 197 aa13.36□□□□□ -0.27
RCC1-204ENST00000398958 PYCARDQ9ULZ3 195 aa13.36□□□□□ -0.27
RCC1-204ENST00000398958 COL22A1Q8NFW1 1626 aaPredicted RBP13.36□□□□□ -0.27
RCC1-204ENST00000398958 UBN2Q6ZU65 1347 aa13.36□□□□□ -0.27
RCC1-204ENST00000398958 A0A1B0GUL7 405 aa13.36□□□□□ -0.27
RCC1-204ENST00000398958 STX6O43752 255 aa13.36□□□□□ -0.27
RCC1-204ENST00000398958 U2AF2P26368 475 aaKnown RBP eCLIP13.36□□□□□ -0.272e-12■■□□□ 11.6
RCC1-204ENST00000398958 SUSD4Q5VX71 490 aa13.36□□□□□ -0.27
RCC1-204ENST00000398958 PKD1L3Q7Z443 1732 aa13.36□□□□□ -0.27
RCC1-204ENST00000398958 HAND2P61296 217 aa13.35□□□□□ -0.27
RCC1-204ENST00000398958 DNM1Q05193 864 aaKnown RBP13.35□□□□□ -0.27
RCC1-204ENST00000398958 SLC4A8Q2Y0W8 1093 aa13.35□□□□□ -0.27
RCC1-204ENST00000398958 METTL24Q5JXM2 366 aa13.35□□□□□ -0.27
RCC1-204ENST00000398958 GIMAP6Q6P9H5 292 aa13.35□□□□□ -0.27
RCC1-204ENST00000398958 KIAA1524Q8TCG1 905 aa13.35□□□□□ -0.27
RCC1-204ENST00000398958 ZSWIM6Q9HCJ5 1215 aa13.35□□□□□ -0.27
RCC1-204ENST00000398958 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.35□□□□□ -0.27
RCC1-204ENST00000398958 H7C1W4 665 aa13.35□□□□□ -0.27
RCC1-204ENST00000398958 IGSF3O75054 1194 aa13.35□□□□□ -0.27
RCC1-204ENST00000398958 IFIT5Q13325 482 aaKnown RBP13.35□□□□□ -0.27
RCC1-204ENST00000398958 NLRP10Q86W26 655 aa13.35□□□□□ -0.27
RCC1-204ENST00000398958 TMEM87AQ8NBN3 555 aa13.35□□□□□ -0.27
RCC1-204ENST00000398958 PLCH1Q4KWH8 1693 aa13.35□□□□□ -0.27
RCC1-204ENST00000398958 ADAMTS7Q9UKP4 1686 aa13.35□□□□□ -0.27
RCC1-204ENST00000398958 UBE2HP62256 183 aa13.34□□□□□ -0.27
RCC1-204ENST00000398958 RABL6Q3YEC7 729 aaPredicted RBP13.34□□□□□ -0.27
RCC1-204ENST00000398958 KCNF1Q9H3M0 494 aa13.34□□□□□ -0.27
RCC1-204ENST00000398958 ZSCAN22P10073 491 aaPredicted RBP13.34□□□□□ -0.27
RCC1-204ENST00000398958 WASHC4Q2M389 1173 aa13.34□□□□□ -0.27
RCC1-204ENST00000398958 BLOC1S2Q6QNY1 142 aa13.34□□□□□ -0.27
RCC1-204ENST00000398958 DDX11Q96FC9 970 aa13.34□□□□□ -0.27
RCC1-204ENST00000398958 SHANK3Q9BYB0 1731 aa13.34□□□□□ -0.27
RCC1-204ENST00000398958 PARP4Q9UKK3 1724 aaKnown RBP13.34□□□□□ -0.27
RCC1-204ENST00000398958 ZNF609O15014 1411 aa13.34□□□□□ -0.27
RCC1-204ENST00000398958 JCADQ9P266 1359 aa13.34□□□□□ -0.27
RCC1-204ENST00000398958 SPATA31A5Q5VU36 1347 aa13.34□□□□□ -0.27
RCC1-204ENST00000398958 SPATA31A7Q8IWB4 1347 aa13.34□□□□□ -0.27
RCC1-204ENST00000398958 GNPATO15228 680 aa13.33□□□□□ -0.27
RCC1-204ENST00000398958 AP5Z1O43299 807 aa13.33□□□□□ -0.27
RCC1-204ENST00000398958 ATP5JP18859 108 aa13.33□□□□□ -0.27
RCC1-204ENST00000398958 INTS5Q6P9B9 1019 aaKnown RBP13.33□□□□□ -0.27
RCC1-204ENST00000398958 C3orf67Q6ZVT6 689 aa13.33□□□□□ -0.27
RCC1-204ENST00000398958 LINC00116Q8NCU8 138 aa13.33□□□□□ -0.27
RCC1-204ENST00000398958 MAP3K15Q6ZN16 1313 aa13.33□□□□□ -0.28
RCC1-204ENST00000398958 HSP90B1P14625 803 aaKnown RBP13.33□□□□□ -0.28
RCC1-204ENST00000398958 CEP126Q9P2H0 1117 aa13.33□□□□□ -0.28
RCC1-204ENST00000398958 ARFGEF2Q9Y6D5 1785 aa13.33□□□□□ -0.28
RCC1-204ENST00000398958 JAK2O60674 1132 aa13.33□□□□□ -0.28
RCC1-204ENST00000398958 TTLL5Q6EMB2 1281 aa13.33□□□□□ -0.28
RCC1-204ENST00000398958 GIGYF2Q6Y7W6 1299 aaKnown RBP13.33□□□□□ -0.28
RCC1-204ENST00000398958 CCDC191Q8NCU4 936 aa13.33□□□□□ -0.28
RCC1-204ENST00000398958 ANKRD7Q92527 254 aa13.33□□□□□ -0.28
RCC1-204ENST00000398958 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.33□□□□□ -0.28
RCC1-204ENST00000398958 PALLDQ8WX93 1383 aa13.32□□□□□ -0.28
RCC1-204ENST00000398958 TOB2Q14106 344 aaPredicted RBP13.32□□□□□ -0.28
RCC1-204ENST00000398958 CDC37L1Q7L3B6 337 aa13.32□□□□□ -0.28
RCC1-204ENST00000398958 TFIP11Q9UBB9 837 aaKnown RBP13.32□□□□□ -0.28
RCC1-204ENST00000398958 LRP6O75581 1613 aa13.32□□□□□ -0.28
RCC1-204ENST00000398958 F13A1P00488 732 aa13.32□□□□□ -0.28
RCC1-204ENST00000398958 TPM3P06753 285 aa13.32□□□□□ -0.28
RCC1-204ENST00000398958 CYP21A2P08686 494 aa13.32□□□□□ -0.28
RCC1-204ENST00000398958 IFIT1P09914 478 aaKnown RBP13.32□□□□□ -0.28
RCC1-204ENST00000398958 CCDC87Q9NVE4 849 aa13.32□□□□□ -0.28
RCC1-204ENST00000398958 PAG1Q9NWQ8 432 aa13.32□□□□□ -0.28
RCC1-204ENST00000398958 BCL9O00512 1426 aa13.31□□□□□ -0.28
RCC1-204ENST00000398958 GOLGA6L6A8MZA4 724 aa13.31□□□□□ -0.28
RCC1-204ENST00000398958 FGD1P98174 961 aa13.31□□□□□ -0.28
RCC1-204ENST00000398958 USPL1Q5W0Q7 1092 aa13.31□□□□□ -0.28
RCC1-204ENST00000398958 LARP1BQ659C4 914 aaKnown RBP13.31□□□□□ -0.28
RCC1-204ENST00000398958 FUCA2Q9BTY2 467 aa13.31□□□□□ -0.28
RCC1-204ENST00000398958 AFF2P51816 1311 aa13.31□□□□□ -0.28
RCC1-204ENST00000398958 IDH1O75874 414 aaKnown RBP13.31□□□□□ -0.28
RCC1-204ENST00000398958 TRIM37O94972 964 aa13.31□□□□□ -0.28
RCC1-204ENST00000398958 Q6ZUG5 572 aa13.31□□□□□ -0.28
RCC1-204ENST00000398958 STOX1Q6ZVD7 989 aa13.31□□□□□ -0.28
RCC1-204ENST00000398958 TTLL11Q8NHH1 800 aa13.31□□□□□ -0.28
RCC1-204ENST00000398958 XAGE2Q96GT9 111 aa13.31□□□□□ -0.28
RCC1-204ENST00000398958 HAUS7Q99871 368 aa13.31□□□□□ -0.28
RCC1-204ENST00000398958 MTMR6Q9Y217 621 aa13.31□□□□□ -0.28
RCC1-204ENST00000398958 KCPQ6ZWJ8 1503 aa13.3□□□□□ -0.28
RCC1-204ENST00000398958 MED23Q9ULK4 1368 aa13.3□□□□□ -0.28
RCC1-204ENST00000398958 EYA2O00167 538 aa13.3□□□□□ -0.28
RCC1-204ENST00000398958 RPS6KB1P23443 525 aa13.3□□□□□ -0.28
RCC1-204ENST00000398958 ZAP70P43403 619 aa13.3□□□□□ -0.28
RCC1-204ENST00000398958 TTC39AQ5SRH9 613 aa13.3□□□□□ -0.28
RCC1-204ENST00000398958 GPR101Q96P66 508 aaPredicted RBP13.3□□□□□ -0.28
RCC1-204ENST00000398958 DISP2A7MBM2 1401 aa13.3□□□□□ -0.28
RCC1-204ENST00000398958 GLI3P10071 1580 aa13.3□□□□□ -0.28
RCC1-204ENST00000398958 MRC1P22897 1456 aa13.3□□□□□ -0.28
RCC1-204ENST00000398958 BCL9LQ86UU0 1499 aa13.3□□□□□ -0.28
RCC1-204ENST00000398958 HIP1O00291 1037 aa13.3□□□□□ -0.28
RCC1-204ENST00000398958 CTIFO43310 598 aaKnown RBP13.3□□□□□ -0.28
RCC1-204ENST00000398958 CCT2P78371 535 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms