RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 EYA2O00167 538 aa23.45■■□□□ 1.34
COLCA2-201ENST00000398035 RFX5P48382 616 aaPredicted RBP23.45■■□□□ 1.34
COLCA2-201ENST00000398035 PTPN12Q05209 780 aaKnown RBP23.45■■□□□ 1.34
COLCA2-201ENST00000398035 MTX1Q13505 466 aa23.45■■□□□ 1.34
COLCA2-201ENST00000398035 METTL24Q5JXM2 366 aa23.45■■□□□ 1.34
COLCA2-201ENST00000398035 ZNF804AQ7Z570 1209 aa23.45■■□□□ 1.34
COLCA2-201ENST00000398035 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.45■■□□□ 1.34
COLCA2-201ENST00000398035 MYH3P11055 1940 aa23.45■■□□□ 1.34
COLCA2-201ENST00000398035 PDE8BO95263 885 aa23.44■■□□□ 1.34
COLCA2-201ENST00000398035 STRIP1Q5VSL9 837 aa23.44■■□□□ 1.34
COLCA2-201ENST00000398035 TXNRD3Q86VQ6 643 aa23.44■■□□□ 1.34
COLCA2-201ENST00000398035 ITPRIPQ8IWB1 547 aa23.44■■□□□ 1.34
COLCA2-201ENST00000398035 CIAO1O76071 339 aa23.43■■□□□ 1.34
COLCA2-201ENST00000398035 MMP14P50281 582 aa23.43■■□□□ 1.34
COLCA2-201ENST00000398035 LRRC24Q50LG9 513 aa23.43■■□□□ 1.34
COLCA2-201ENST00000398035 RSBN1LQ6PCB5 846 aaPredicted RBP23.43■■□□□ 1.34
COLCA2-201ENST00000398035 KLHDC4Q8TBB5 520 aa23.42■■□□□ 1.34
COLCA2-201ENST00000398035 CHMP4BQ9H444 224 aaKnown RBP23.42■■□□□ 1.34
COLCA2-201ENST00000398035 CD209Q9NNX6 404 aa23.42■■□□□ 1.34
COLCA2-201ENST00000398035 COPRSQ9NQ92 184 aa23.42■■□□□ 1.34
COLCA2-201ENST00000398035 ZBTB12Q9Y330 459 aaPredicted RBP23.42■■□□□ 1.34
COLCA2-201ENST00000398035 LTBP1Q14766 1721 aa23.42■■□□□ 1.34
COLCA2-201ENST00000398035 ZBTB7BO15156 539 aaPredicted RBP23.42■■□□□ 1.34
COLCA2-201ENST00000398035 SRGAP3O43295 1099 aa23.42■■□□□ 1.34
COLCA2-201ENST00000398035 APLP1P51693 650 aa23.42■■□□□ 1.34
COLCA2-201ENST00000398035 TTLL5Q6EMB2 1281 aa23.42■■□□□ 1.34
COLCA2-201ENST00000398035 ZC3H15Q8WU90 426 aaKnown RBP23.42■■□□□ 1.34
COLCA2-201ENST00000398035 MYO3BQ8WXR4 1341 aa23.41■■□□□ 1.34
COLCA2-201ENST00000398035 SNAP23O00161 211 aa23.41■■□□□ 1.34
COLCA2-201ENST00000398035 IL15P40933 162 aaPredicted RBP23.41■■□□□ 1.34
COLCA2-201ENST00000398035 MICALL2Q8IY33 904 aa23.41■■□□□ 1.34
COLCA2-201ENST00000398035 POTEIP0CG38 1075 aa23.4■■□□□ 1.34
COLCA2-201ENST00000398035 POTEJP0CG39 1038 aa23.4■■□□□ 1.34
COLCA2-201ENST00000398035 RLBP1P12271 317 aa23.4■■□□□ 1.34
COLCA2-201ENST00000398035 IL1R1P14778 569 aa23.4■■□□□ 1.34
COLCA2-201ENST00000398035 CAVIN4Q5BKX8 364 aa23.4■■□□□ 1.34
COLCA2-201ENST00000398035 CEP126Q9P2H0 1117 aa23.4■■□□□ 1.34
COLCA2-201ENST00000398035 IRS2Q9Y4H2 1338 aa23.39■■□□□ 1.34
COLCA2-201ENST00000398035 IFIT1P09914 478 aaKnown RBP23.39■■□□□ 1.33
COLCA2-201ENST00000398035 KLRK1P26718 216 aa23.39■■□□□ 1.33
COLCA2-201ENST00000398035 HIBADHP31937 336 aaKnown RBP23.39■■□□□ 1.33
COLCA2-201ENST00000398035 PUM3Q15397 648 aaKnown RBP23.39■■□□□ 1.33
COLCA2-201ENST00000398035 OGFOD1Q8N543 542 aa23.39■■□□□ 1.33
COLCA2-201ENST00000398035 SASH1O94885 1247 aa23.38■■□□□ 1.33
COLCA2-201ENST00000398035 VPS37DQ86XT2 251 aa23.38■■□□□ 1.33
COLCA2-201ENST00000398035 CNTROBQ8N137 903 aa23.38■■□□□ 1.33
COLCA2-201ENST00000398035 VGLL2Q8N8G2 317 aa23.38■■□□□ 1.33
COLCA2-201ENST00000398035 SCN4AP35499 1836 aa23.38■■□□□ 1.33
COLCA2-201ENST00000398035 USP17L8P0C7I0 530 aa23.37■■□□□ 1.33
COLCA2-201ENST00000398035 DACT2Q5SW24 774 aa23.37■■□□□ 1.33
COLCA2-201ENST00000398035 ATG9AQ7Z3C6 839 aa23.37■■□□□ 1.33
COLCA2-201ENST00000398035 PANK1Q8TE04 598 aa23.37■■□□□ 1.33
COLCA2-201ENST00000398035 LPIN2Q92539 896 aa23.37■■□□□ 1.33
COLCA2-201ENST00000398035 FAM84BQ96KN1 310 aaPredicted RBP23.37■■□□□ 1.33
COLCA2-201ENST00000398035 YTHDC1Q96MU7 727 aaKnown RBP23.37■■□□□ 1.33
COLCA2-201ENST00000398035 PGAP2Q9UHJ9 254 aa23.37■■□□□ 1.33
COLCA2-201ENST00000398035 DDX19BQ9UMR2 479 aa23.37■■□□□ 1.33
COLCA2-201ENST00000398035 ZNF609O15014 1411 aa23.37■■□□□ 1.33
COLCA2-201ENST00000398035 GTF2IP78347 998 aa23.36■■□□□ 1.33
COLCA2-201ENST00000398035 PDE3AQ14432 1141 aa23.36■■□□□ 1.33
COLCA2-201ENST00000398035 FBXW7Q969H0 707 aa23.36■■□□□ 1.33
COLCA2-201ENST00000398035 GMLQ99445 158 aa23.36■■□□□ 1.33
COLCA2-201ENST00000398035 SIL1Q9H173 461 aa23.36■■□□□ 1.33
COLCA2-201ENST00000398035 ZNF280AP59817 542 aaPredicted RBP23.35■■□□□ 1.33
COLCA2-201ENST00000398035 FKBP1AP62942 108 aaKnown RBP23.35■■□□□ 1.33
COLCA2-201ENST00000398035 ATP8B2P98198 1209 aa23.35■■□□□ 1.33
COLCA2-201ENST00000398035 ITGBL1O95965 494 aaPredicted RBP23.34■■□□□ 1.33
COLCA2-201ENST00000398035 SLC5A1P13866 664 aa23.34■■□□□ 1.33
COLCA2-201ENST00000398035 MVPQ14764 893 aaKnown RBP23.34■■□□□ 1.33
COLCA2-201ENST00000398035 FBXO33Q7Z6M2 555 aa23.34■■□□□ 1.33
COLCA2-201ENST00000398035 TDRD7Q8NHU6 1098 aaKnown RBP23.34■■□□□ 1.33
COLCA2-201ENST00000398035 FGFR2P21802 821 aa23.33■■□□□ 1.33
COLCA2-201ENST00000398035 G3BP1Q13283 466 aaKnown RBP eCLIP23.33■■□□□ 1.33
COLCA2-201ENST00000398035 MAP1SQ66K74 1059 aaPredicted RBP23.33■■□□□ 1.33
COLCA2-201ENST00000398035 SAMD7Q7Z3H4 446 aa23.33■■□□□ 1.33
COLCA2-201ENST00000398035 HDAC9Q9UKV0 1011 aa23.33■■□□□ 1.33
COLCA2-201ENST00000398035 PA2G4Q9UQ80 394 aaKnown RBP23.33■■□□□ 1.33
COLCA2-201ENST00000398035 AKAP2Q9Y2D5 859 aa23.33■■□□□ 1.33
COLCA2-201ENST00000398035 GYG1P46976 350 aa23.33■■□□□ 1.32
COLCA2-201ENST00000398035 HIRAP54198 1017 aaPredicted RBP23.33■■□□□ 1.32
COLCA2-201ENST00000398035 FRAT2O75474 233 aaPredicted RBP23.32■■□□□ 1.32
COLCA2-201ENST00000398035 TBC1D10BQ4KMP7 808 aaPredicted RBP23.32■■□□□ 1.32
COLCA2-201ENST00000398035 RBM26Q5T8P6 1007 aaKnown RBP23.32■■□□□ 1.32
COLCA2-201ENST00000398035 SSH3Q8TE77 659 aa23.32■■□□□ 1.32
COLCA2-201ENST00000398035 PNMA6EA0A0J9YXQ4 647 aa23.31■■□□□ 1.32
COLCA2-201ENST00000398035 KIF4BQ2VIQ3 1234 aa23.31■■□□□ 1.32
COLCA2-201ENST00000398035 CDC37L1Q7L3B6 337 aa23.31■■□□□ 1.32
COLCA2-201ENST00000398035 TRPM4Q8TD43 1214 aa23.31■■□□□ 1.32
COLCA2-201ENST00000398035 MYOZ2Q9NPC6 264 aa23.31■■□□□ 1.32
COLCA2-201ENST00000398035 FAM205AQ6ZU69 1335 aa23.31■■□□□ 1.32
COLCA2-201ENST00000398035 PASKQ96RG2 1323 aa23.31■■□□□ 1.32
COLCA2-201ENST00000398035 SHTN1A0MZ66 631 aa23.3■■□□□ 1.32
COLCA2-201ENST00000398035 POLA2Q14181 598 aa23.3■■□□□ 1.32
COLCA2-201ENST00000398035 ATP2B3Q16720 1220 aa23.3■■□□□ 1.32
COLCA2-201ENST00000398035 DCPSQ96C86 337 aaKnown RBP23.3■■□□□ 1.32
COLCA2-201ENST00000398035 GNL3LQ9NVN8 582 aaKnown RBP23.3■■□□□ 1.32
COLCA2-201ENST00000398035 COG6Q9Y2V7 657 aa23.29■■□□□ 1.32
COLCA2-201ENST00000398035 BCAMP50895 628 aa23.28■■□□□ 1.32
COLCA2-201ENST00000398035 RPAP2Q8IXW5 612 aaPredicted RBP23.28■■□□□ 1.32
COLCA2-201ENST00000398035 TBC1D22AQ8WUA7 517 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms