RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 MTIF2P46199 727 aaKnown RBP14.27□□□□□ -0.12
SOCS6-201ENST00000397942 PIP4K2BP78356 416 aa14.27□□□□□ -0.12
SOCS6-201ENST00000397942 BMS1Q14692 1282 aaKnown RBP14.27□□□□□ -0.12
SOCS6-201ENST00000397942 C17orf53Q8N3J3 647 aaPredicted RBP14.27□□□□□ -0.12
SOCS6-201ENST00000397942 OSBPL3Q9H4L5 887 aa14.27□□□□□ -0.12
SOCS6-201ENST00000397942 CCDC152Q4G0S7 254 aa14.27□□□□□ -0.12
SOCS6-201ENST00000397942 IRS4O14654 1257 aaPredicted RBP14.27□□□□□ -0.13
SOCS6-201ENST00000397942 IQCEQ6IPM2 695 aa14.27□□□□□ -0.13
SOCS6-201ENST00000397942 BRAPQ7Z569 592 aa14.27□□□□□ -0.13
SOCS6-201ENST00000397942 ZHX1Q9UKY1 873 aaPredicted RBP14.27□□□□□ -0.13
SOCS6-201ENST00000397942 PLBD2Q8NHP8 589 aa14.26□□□□□ -0.13
SOCS6-201ENST00000397942 FSD2A1L4K1 749 aa14.26□□□□□ -0.13
SOCS6-201ENST00000397942 ZNF594Q96JF6 807 aaPredicted RBP14.26□□□□□ -0.13
SOCS6-201ENST00000397942 KIF21AQ7Z4S6 1674 aa14.26□□□□□ -0.13
SOCS6-201ENST00000397942 GOLGA6L10A6NI86 522 aa14.26□□□□□ -0.13
SOCS6-201ENST00000397942 C6orf229H3BNL8 230 aa14.26□□□□□ -0.13
SOCS6-201ENST00000397942 PTH1RQ03431 593 aa14.26□□□□□ -0.13
SOCS6-201ENST00000397942 ME3Q16798 604 aa14.26□□□□□ -0.13
SOCS6-201ENST00000397942 SLC4A8Q2Y0W8 1093 aa14.26□□□□□ -0.13
SOCS6-201ENST00000397942 ATL3Q6DD88 541 aa14.26□□□□□ -0.13
SOCS6-201ENST00000397942 MYO6Q9UM54 1294 aa14.26□□□□□ -0.13
SOCS6-201ENST00000397942 SLU7O95391 586 aaKnown RBP14.26□□□□□ -0.13
SOCS6-201ENST00000397942 BMP15O95972 392 aa14.26□□□□□ -0.13
SOCS6-201ENST00000397942 PAFAH1B1P43034 410 aa14.26□□□□□ -0.13
SOCS6-201ENST00000397942 DNA2P51530 1060 aa14.26□□□□□ -0.13
SOCS6-201ENST00000397942 TDRD12Q587J7 1177 aaKnown RBP14.26□□□□□ -0.13
SOCS6-201ENST00000397942 ZNF76P36508 570 aa14.25□□□□□ -0.13
SOCS6-201ENST00000397942 CDC37L1Q7L3B6 337 aa14.25□□□□□ -0.13
SOCS6-201ENST00000397942 STAP2Q9UGK3 403 aa14.25□□□□□ -0.13
SOCS6-201ENST00000397942 ARHGEF5Q12774 1597 aa14.25□□□□□ -0.13
SOCS6-201ENST00000397942 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.25□□□□□ -0.13
SOCS6-201ENST00000397942 BEND3Q5T5X7 828 aa14.25□□□□□ -0.13
SOCS6-201ENST00000397942 NGLY1Q96IV0 654 aa14.25□□□□□ -0.13
SOCS6-201ENST00000397942 BAG3O95817 575 aa14.25□□□□□ -0.13
SOCS6-201ENST00000397942 MIGA1Q8NAN2 632 aa14.25□□□□□ -0.13
SOCS6-201ENST00000397942 TAF4BQ92750 862 aa14.25□□□□□ -0.13
SOCS6-201ENST00000397942 KAT14Q9H8E8 782 aa14.25□□□□□ -0.13
SOCS6-201ENST00000397942 NIP7Q9Y221 180 aaKnown RBP eCLIP14.25□□□□□ -0.13
SOCS6-201ENST00000397942 SPAG1Q07617 926 aa14.25□□□□□ -0.13
SOCS6-201ENST00000397942 NAA16Q6N069 864 aaPredicted RBP14.25□□□□□ -0.13
SOCS6-201ENST00000397942 ANKRD18AQ8IVF6 992 aa14.25□□□□□ -0.13
SOCS6-201ENST00000397942 CCDC191Q8NCU4 936 aa14.25□□□□□ -0.13
SOCS6-201ENST00000397942 AKR1B10O60218 316 aa14.25□□□□□ -0.13
SOCS6-201ENST00000397942 TMEM2Q9UHN6 1383 aa14.24□□□□□ -0.13
SOCS6-201ENST00000397942 IFIT1BQ5T764 474 aaKnown RBP14.24□□□□□ -0.13
SOCS6-201ENST00000397942 APPBP2Q92624 585 aa14.24□□□□□ -0.13
SOCS6-201ENST00000397942 HELLSQ9NRZ9 838 aa14.24□□□□□ -0.13
SOCS6-201ENST00000397942 MTMR6Q9Y217 621 aa14.24□□□□□ -0.13
SOCS6-201ENST00000397942 USO1O60763 962 aaKnown RBP14.24□□□□□ -0.13
SOCS6-201ENST00000397942 ATP5JP18859 108 aa14.24□□□□□ -0.13
SOCS6-201ENST00000397942 STX17P56962 302 aa14.24□□□□□ -0.13
SOCS6-201ENST00000397942 DZIP3Q86Y13 1208 aaKnown RBP14.24□□□□□ -0.13
SOCS6-201ENST00000397942 CRACR2BQ8N4Y2 399 aaPredicted RBP14.24□□□□□ -0.13
SOCS6-201ENST00000397942 DHX58Q96C10 678 aa14.24□□□□□ -0.13
SOCS6-201ENST00000397942 NLRP3Q96P20 1036 aa14.24□□□□□ -0.13
SOCS6-201ENST00000397942 PPP1R9BQ96SB3 815 aa14.24□□□□□ -0.13
SOCS6-201ENST00000397942 LLPHQ9BRT6 129 aaKnown RBP14.24□□□□□ -0.13
SOCS6-201ENST00000397942 CEP170Q5SW79 1584 aa14.24□□□□□ -0.13
SOCS6-201ENST00000397942 TARBP1Q13395 1621 aaKnown RBP14.24□□□□□ -0.13
SOCS6-201ENST00000397942 TTC6Q86TZ1 520 aa14.24□□□□□ -0.13
SOCS6-201ENST00000397942 KLHL34Q8N239 644 aa14.24□□□□□ -0.13
SOCS6-201ENST00000397942 ARFGAP3Q9NP61 516 aa14.24□□□□□ -0.13
SOCS6-201ENST00000397942 RNF216Q9NWF9 866 aaPredicted RBP14.24□□□□□ -0.13
SOCS6-201ENST00000397942 KRT222Q8N1A0 295 aa14.23□□□□□ -0.13
SOCS6-201ENST00000397942 TRIM47Q96LD4 638 aa14.23□□□□□ -0.13
SOCS6-201ENST00000397942 CRNKL1Q9BZJ0 848 aaKnown RBP14.23□□□□□ -0.13
SOCS6-201ENST00000397942 A0A0D9SFI3 127 aa14.23□□□□□ -0.13
SOCS6-201ENST00000397942 MPHOSPH10O00566 681 aaKnown RBP14.23□□□□□ -0.13
SOCS6-201ENST00000397942 IGSF3O75054 1194 aa14.23□□□□□ -0.13
SOCS6-201ENST00000397942 ERLIN2O94905 339 aa14.23□□□□□ -0.13
SOCS6-201ENST00000397942 TRIM21P19474 475 aaKnown RBP14.23□□□□□ -0.13
SOCS6-201ENST00000397942 TMEM266Q2M3C6 531 aa14.23□□□□□ -0.13
SOCS6-201ENST00000397942 ANGEL1Q9UNK9 670 aaKnown RBP14.23□□□□□ -0.13
SOCS6-201ENST00000397942 B4E1Z4 1266 aa14.23□□□□□ -0.13
SOCS6-201ENST00000397942 TRERF1Q96PN7 1200 aa14.23□□□□□ -0.13
SOCS6-201ENST00000397942 SLC52A2Q9HAB3 445 aa14.23□□□□□ -0.13
SOCS6-201ENST00000397942 CBX8Q9HC52 389 aa14.23□□□□□ -0.13
SOCS6-201ENST00000397942 GPAA1O43292 621 aa14.23□□□□□ -0.13
SOCS6-201ENST00000397942 CCDC96Q2M329 555 aa14.23□□□□□ -0.13
SOCS6-201ENST00000397942 TAF3Q5VWG9 929 aa14.23□□□□□ -0.13
SOCS6-201ENST00000397942 PYM1Q9BRP8 204 aaKnown RBP14.23□□□□□ -0.13
SOCS6-201ENST00000397942 SEPT11Q9NVA2 429 aaKnown RBP14.23□□□□□ -0.13
SOCS6-201ENST00000397942 MYL5Q02045 173 aa14.22□□□□□ -0.13
SOCS6-201ENST00000397942 RRAGBQ5VZM2 374 aa14.22□□□□□ -0.13
SOCS6-201ENST00000397942 NBPF5PQ86XG9 351 aaPredicted RBP14.22□□□□□ -0.13
SOCS6-201ENST00000397942 GPT2Q8TD30 523 aa14.22□□□□□ -0.13
SOCS6-201ENST00000397942 METP08581 1390 aa14.22□□□□□ -0.13
SOCS6-201ENST00000397942 IBTKQ9P2D0 1353 aaPredicted RBP14.22□□□□□ -0.13
SOCS6-201ENST00000397942 AATKQ6ZMQ8 1374 aa14.22□□□□□ -0.13
SOCS6-201ENST00000397942 LIG1P18858 919 aa14.22□□□□□ -0.13
SOCS6-201ENST00000397942 GTF2F1P35269 517 aaKnown RBP eCLIP14.22□□□□□ -0.136e-6■■■■□ 21.5
SOCS6-201ENST00000397942 MAP9Q49MG5 647 aa14.22□□□□□ -0.13
SOCS6-201ENST00000397942 UGGT1Q9NYU2 1555 aa14.22□□□□□ -0.13
SOCS6-201ENST00000397942 NEURL1BA8MQ27 555 aa14.22□□□□□ -0.13
SOCS6-201ENST00000397942 FGFR1OPO95684 399 aaKnown RBP14.22□□□□□ -0.13
SOCS6-201ENST00000397942 CLSTN2Q9H4D0 955 aa14.22□□□□□ -0.13
SOCS6-201ENST00000397942 SEC62Q99442 399 aaKnown RBP14.21□□□□□ -0.13
SOCS6-201ENST00000397942 UBA5Q9GZZ9 404 aa14.21□□□□□ -0.13
SOCS6-201ENST00000397942 AMPD3Q01432 767 aa14.21□□□□□ -0.13
SOCS6-201ENST00000397942 MCM6Q14566 821 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms