RNA–Protein interactions for RNA: ENST00000397459.6

CNTN4-201, Transcript of contactin 4, humanhuman

TSL 1 (best) BASIC

Gene CNTN4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-201ENST00000397459 TNNT1P13805 278 aa9.52□□□□□ -0.89
CNTN4-201ENST00000397459 RFX5P48382 616 aaPredicted RBP9.52□□□□□ -0.89
CNTN4-201ENST00000397459 IQCB1Q15051 598 aa9.52□□□□□ -0.89
CNTN4-201ENST00000397459 Q6ZUG5 572 aa9.52□□□□□ -0.89
CNTN4-201ENST00000397459 KCNG4Q8TDN1 519 aa9.52□□□□□ -0.89
CNTN4-201ENST00000397459 NOL10Q9BSC4 688 aaKnown RBP9.52□□□□□ -0.89
CNTN4-201ENST00000397459 AP5Z1O43299 807 aa9.51□□□□□ -0.89
CNTN4-201ENST00000397459 CIAO1O76071 339 aa9.51□□□□□ -0.89
CNTN4-201ENST00000397459 SLC39A6Q13433 755 aa9.51□□□□□ -0.89
CNTN4-201ENST00000397459 PPP4R3BQ5MIZ7 849 aa9.51□□□□□ -0.89
CNTN4-201ENST00000397459 ANKRD13DQ6ZTN6 518 aa9.51□□□□□ -0.89
CNTN4-201ENST00000397459 SPC24Q8NBT2 197 aa9.51□□□□□ -0.89
CNTN4-201ENST00000397459 DCAF5Q96JK2 942 aa9.51□□□□□ -0.89
CNTN4-201ENST00000397459 PGBD1Q96JS3 809 aa9.51□□□□□ -0.89
CNTN4-201ENST00000397459 FMNL2Q96PY5 1086 aa9.51□□□□□ -0.89
CNTN4-201ENST00000397459 OSBPL5Q9H0X9 879 aaPredicted RBP9.51□□□□□ -0.89
CNTN4-201ENST00000397459 ZNF609O15014 1411 aa9.51□□□□□ -0.89
CNTN4-201ENST00000397459 NR1I2O75469 434 aa9.51□□□□□ -0.89
CNTN4-201ENST00000397459 ANXA1P04083 346 aa9.51□□□□□ -0.89
CNTN4-201ENST00000397459 IL15P40933 162 aaPredicted RBP9.51□□□□□ -0.89
CNTN4-201ENST00000397459 PTPN12Q05209 780 aaKnown RBP9.51□□□□□ -0.89
CNTN4-201ENST00000397459 TPD52L1Q16890 204 aaPredicted RBP9.51□□□□□ -0.89
CNTN4-201ENST00000397459 FERMT3Q86UX7 667 aa9.51□□□□□ -0.89
CNTN4-201ENST00000397459 TTC5Q8N0Z6 440 aa9.51□□□□□ -0.89
CNTN4-201ENST00000397459 LTBP4Q8N2S1 1624 aa9.51□□□□□ -0.89
CNTN4-201ENST00000397459 NSUN7Q8NE18 718 aaKnown RBP9.51□□□□□ -0.89
CNTN4-201ENST00000397459 PLBD2Q8NHP8 589 aa9.51□□□□□ -0.89
CNTN4-201ENST00000397459 IPO4Q8TEX9 1081 aaKnown RBP9.51□□□□□ -0.89
CNTN4-201ENST00000397459 BBXQ8WY36 941 aaPredicted RBP9.51□□□□□ -0.89
CNTN4-201ENST00000397459 STRN4Q9NRL3 753 aa9.51□□□□□ -0.89
CNTN4-201ENST00000397459 SALL1Q9NSC2 1324 aa9.51□□□□□ -0.89
CNTN4-201ENST00000397459 RTEL1Q9NZ71 1219 aa9.51□□□□□ -0.89
CNTN4-201ENST00000397459 PRDM4Q9UKN5 801 aa9.51□□□□□ -0.89
CNTN4-201ENST00000397459 ROBO1Q9Y6N7 1651 aa9.51□□□□□ -0.89
CNTN4-201ENST00000397459 C5P01031 1676 aa9.5□□□□□ -0.89
CNTN4-201ENST00000397459 PROSER3Q2NL68 480 aa9.5□□□□□ -0.89
CNTN4-201ENST00000397459 CEP135Q66GS9 1140 aa9.5□□□□□ -0.89
CNTN4-201ENST00000397459 ADALQ6DHV7 355 aa9.5□□□□□ -0.89
CNTN4-201ENST00000397459 ZNF589Q86UQ0 364 aaPredicted RBP9.5□□□□□ -0.89
CNTN4-201ENST00000397459 LRRC8AQ8IWT6 810 aa9.5□□□□□ -0.89
CNTN4-201ENST00000397459 CCAR1Q8IX12 1150 aaKnown RBP9.5□□□□□ -0.89
CNTN4-201ENST00000397459 CKAP2LQ8IYA6 745 aa9.5□□□□□ -0.89
CNTN4-201ENST00000397459 KIF18AQ8NI77 898 aa9.5□□□□□ -0.89
CNTN4-201ENST00000397459 ERO1AQ96HE7 468 aa9.5□□□□□ -0.89
CNTN4-201ENST00000397459 CARD10Q9BWT7 1032 aa9.5□□□□□ -0.89
CNTN4-201ENST00000397459 DBNLQ9UJU6 430 aaKnown RBP9.5□□□□□ -0.89
CNTN4-201ENST00000397459 AFDNP55196 1824 aaKnown RBP9.5□□□□□ -0.89
CNTN4-201ENST00000397459 ARFGEF2Q9Y6D5 1785 aa9.5□□□□□ -0.89
CNTN4-201ENST00000397459 PSDA5PKW4 1024 aaPredicted RBP9.5□□□□□ -0.89
CNTN4-201ENST00000397459 EVA1CP58658 441 aa9.5□□□□□ -0.89
CNTN4-201ENST00000397459 EXOSC10Q01780 885 aaKnown RBP9.5□□□□□ -0.89
CNTN4-201ENST00000397459 PTPN14Q15678 1187 aa9.5□□□□□ -0.89
CNTN4-201ENST00000397459 CAMK4Q16566 473 aa9.5□□□□□ -0.89
CNTN4-201ENST00000397459 ZMYM1Q5SVZ6 1142 aa9.5□□□□□ -0.89
CNTN4-201ENST00000397459 ZCRB1Q8TBF4 217 aaKnown RBP9.5□□□□□ -0.89
CNTN4-201ENST00000397459 XAGE3Q8WTP9 111 aa9.5□□□□□ -0.89
CNTN4-201ENST00000397459 MRPS27Q92552 414 aaKnown RBP9.5□□□□□ -0.89
CNTN4-201ENST00000397459 TIGD1Q96MW7 591 aa9.5□□□□□ -0.89
CNTN4-201ENST00000397459 LARP6Q9BRS8 491 aaKnown RBP9.5□□□□□ -0.89
CNTN4-201ENST00000397459 DNAJC25Q9H1X3 360 aa9.5□□□□□ -0.89
CNTN4-201ENST00000397459 CYP21A2P08686 494 aa9.49□□□□□ -0.89
CNTN4-201ENST00000397459 ZNF397Q8NF99 534 aaPredicted RBP9.49□□□□□ -0.89
CNTN4-201ENST00000397459 MYD88Q99836 296 aa9.49□□□□□ -0.89
CNTN4-201ENST00000397459 SRRTQ9BXP5 876 aaKnown RBP9.49□□□□□ -0.89
CNTN4-201ENST00000397459 POLR3EQ9NVU0 708 aa9.49□□□□□ -0.89
CNTN4-201ENST00000397459 TFIP11Q9UBB9 837 aaKnown RBP9.49□□□□□ -0.89
CNTN4-201ENST00000397459 PTPDC1A2A3K4 754 aa9.49□□□□□ -0.89
CNTN4-201ENST00000397459 CBFA2T2O43439 604 aa9.49□□□□□ -0.89
CNTN4-201ENST00000397459 IL2RBP14784 551 aa9.49□□□□□ -0.89
CNTN4-201ENST00000397459 ZSCAN20P17040 1043 aaPredicted RBP9.49□□□□□ -0.89
CNTN4-201ENST00000397459 ADD1P35611 737 aaKnown RBP9.49□□□□□ -0.89
CNTN4-201ENST00000397459 SCRN1Q12765 414 aa9.49□□□□□ -0.89
CNTN4-201ENST00000397459 NYAP1Q6ZVC0 841 aa9.49□□□□□ -0.89
CNTN4-201ENST00000397459 ELOA2Q8IYF1 753 aaPredicted RBP9.49□□□□□ -0.89
CNTN4-201ENST00000397459 JMYQ8N9B5 988 aa9.49□□□□□ -0.89
CNTN4-201ENST00000397459 ENGASEQ8NFI3 743 aa9.49□□□□□ -0.89
CNTN4-201ENST00000397459 PAG1Q9NWQ8 432 aa9.49□□□□□ -0.89
CNTN4-201ENST00000397459 TLR7Q9NYK1 1049 aaKnown RBP9.49□□□□□ -0.89
CNTN4-201ENST00000397459 MAP3K15Q6ZN16 1313 aa9.48□□□□□ -0.89
CNTN4-201ENST00000397459 IKBKBO14920 756 aa9.48□□□□□ -0.89
CNTN4-201ENST00000397459 NCBP1Q09161 790 aaKnown RBP9.48□□□□□ -0.89
CNTN4-201ENST00000397459 COPS6Q7L5N1 327 aa9.48□□□□□ -0.89
CNTN4-201ENST00000397459 FCHSD1Q86WN1 690 aa9.48□□□□□ -0.89
CNTN4-201ENST00000397459 AKAP2Q9Y2D5 859 aa9.48□□□□□ -0.89
CNTN4-201ENST00000397459 AHDC1Q5TGY3 1603 aaPredicted RBP9.48□□□□□ -0.89
CNTN4-201ENST00000397459 PCDH11XQ9BZA7 1347 aa9.48□□□□□ -0.89
CNTN4-201ENST00000397459 PCDH11YQ9BZA8 1340 aa9.48□□□□□ -0.89
CNTN4-201ENST00000397459 CDKL5O76039 1030 aa9.48□□□□□ -0.89
CNTN4-201ENST00000397459 TPM1P09493 284 aa9.48□□□□□ -0.89
CNTN4-201ENST00000397459 CABP4P57796 275 aa9.48□□□□□ -0.89
CNTN4-201ENST00000397459 TFCP2Q12800 502 aa9.48□□□□□ -0.89
CNTN4-201ENST00000397459 ZNF496Q96IT1 587 aaPredicted RBP9.48□□□□□ -0.89
CNTN4-201ENST00000397459 BTG4Q9NY30 223 aa9.48□□□□□ -0.89
CNTN4-201ENST00000397459 H7C1W4 665 aa9.47□□□□□ -0.89
CNTN4-201ENST00000397459 RNF113AO15541 343 aaKnown RBP9.47□□□□□ -0.89
CNTN4-201ENST00000397459 GTF2E1P29083 439 aaPredicted RBP9.47□□□□□ -0.89
CNTN4-201ENST00000397459 LRP10Q7Z4F1 713 aa9.47□□□□□ -0.89
CNTN4-201ENST00000397459 CACTINQ8WUQ7 758 aaKnown RBP9.47□□□□□ -0.89
CNTN4-201ENST00000397459 SIL1Q9H173 461 aa9.47□□□□□ -0.89
CNTN4-201ENST00000397459 DDX41Q9UJV9 622 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms