RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 RIMBP2O15034 1052 aa11.37□□□□□ -0.59
CAPN3-208ENST00000397204 HUNKP57058 714 aa11.37□□□□□ -0.59
CAPN3-208ENST00000397204 SAMD7Q7Z3H4 446 aa11.37□□□□□ -0.59
CAPN3-208ENST00000397204 CCDC146Q8IYE0 955 aa11.37□□□□□ -0.59
CAPN3-208ENST00000397204 ZC3H12CQ9C0D7 883 aaKnown RBP11.37□□□□□ -0.59
CAPN3-208ENST00000397204 ZNF408Q9H9D4 720 aa11.37□□□□□ -0.59
CAPN3-208ENST00000397204 SHTN1A0MZ66 631 aa11.36□□□□□ -0.59
CAPN3-208ENST00000397204 IRS4O14654 1257 aaPredicted RBP11.36□□□□□ -0.59
CAPN3-208ENST00000397204 GPSM2P81274 684 aa11.36□□□□□ -0.59
CAPN3-208ENST00000397204 MLLT1Q03111 559 aaPredicted RBP11.36□□□□□ -0.59
CAPN3-208ENST00000397204 WDR43Q15061 677 aaKnown RBP eCLIP11.36□□□□□ -0.59
CAPN3-208ENST00000397204 DUSP27Q5VZP5 1158 aa11.36□□□□□ -0.59
CAPN3-208ENST00000397204 POTEGQ6S5H5 508 aa11.36□□□□□ -0.59
CAPN3-208ENST00000397204 KRT26Q7Z3Y9 468 aa11.36□□□□□ -0.59
CAPN3-208ENST00000397204 C2orf69Q8N8R5 385 aa11.36□□□□□ -0.59
CAPN3-208ENST00000397204 TBC1D16Q8TBP0 767 aa11.36□□□□□ -0.59
CAPN3-208ENST00000397204 CCDC102AQ96A19 550 aa11.36□□□□□ -0.59
CAPN3-208ENST00000397204 DCPSQ96C86 337 aaKnown RBP11.36□□□□□ -0.59
CAPN3-208ENST00000397204 CHMP4AQ9BY43 222 aa11.36□□□□□ -0.59
CAPN3-208ENST00000397204 DBNDD1Q9H9R9 158 aa11.36□□□□□ -0.59
CAPN3-208ENST00000397204 PODXL2Q9NZ53 605 aa11.36□□□□□ -0.59
CAPN3-208ENST00000397204 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.36□□□□□ -0.59
CAPN3-208ENST00000397204 TSKSQ9UJT2 592 aa11.36□□□□□ -0.59
CAPN3-208ENST00000397204 ADAMTS8Q9UP79 889 aa11.36□□□□□ -0.59
CAPN3-208ENST00000397204 MYBBP1AQ9BQG0 1328 aaKnown RBP11.35□□□□□ -0.59
CAPN3-208ENST00000397204 ECE2O60344 883 aa11.35□□□□□ -0.59
CAPN3-208ENST00000397204 VIL1P09327 827 aaKnown RBP11.35□□□□□ -0.59
CAPN3-208ENST00000397204 DOK7Q18PE1 504 aa11.35□□□□□ -0.59
CAPN3-208ENST00000397204 TBC1D10BQ4KMP7 808 aaPredicted RBP11.35□□□□□ -0.59
CAPN3-208ENST00000397204 RIC3Q7Z5B4 369 aa11.35□□□□□ -0.59
CAPN3-208ENST00000397204 ZBTB38Q8NAP3 1195 aaPredicted RBP11.35□□□□□ -0.59
CAPN3-208ENST00000397204 ZNF428Q96B54 188 aa11.35□□□□□ -0.59
CAPN3-208ENST00000397204 KCNQ5Q9NR82 932 aa11.35□□□□□ -0.59
CAPN3-208ENST00000397204 TRPM7Q96QT4 1865 aa11.34□□□□□ -0.59
CAPN3-208ENST00000397204 DDX10Q13206 875 aaKnown RBP11.34□□□□□ -0.59
CAPN3-208ENST00000397204 FAM161AQ3B820 660 aa11.34□□□□□ -0.59
CAPN3-208ENST00000397204 RTL5Q5HYW3 569 aaPredicted RBP11.34□□□□□ -0.59
CAPN3-208ENST00000397204 RBM26Q5T8P6 1007 aaKnown RBP11.34□□□□□ -0.59
CAPN3-208ENST00000397204 RGMBQ6NW40 437 aa11.34□□□□□ -0.59
CAPN3-208ENST00000397204 MCOLN1Q9GZU1 580 aa11.34□□□□□ -0.59
CAPN3-208ENST00000397204 GBA2Q9HCG7 927 aaPredicted RBP11.34□□□□□ -0.59
CAPN3-208ENST00000397204 ZNF853P0CG23 659 aa11.33□□□□□ -0.6
CAPN3-208ENST00000397204 DLK2Q6UY11 383 aa11.33□□□□□ -0.6
CAPN3-208ENST00000397204 ZNF710Q8N1W2 664 aa11.33□□□□□ -0.6
CAPN3-208ENST00000397204 SPRYD3Q8NCJ5 442 aa11.33□□□□□ -0.6
CAPN3-208ENST00000397204 CCDC191Q8NCU4 936 aa11.33□□□□□ -0.6
CAPN3-208ENST00000397204 ZIC5Q96T25 663 aa11.33□□□□□ -0.6
CAPN3-208ENST00000397204 ANKIB1Q9P2G1 1089 aa11.33□□□□□ -0.6
CAPN3-208ENST00000397204 THSD7BQ9C0I4 1608 aa11.32□□□□□ -0.6
CAPN3-208ENST00000397204 ANKRD36CQ5JPF3 1778 aa11.32□□□□□ -0.6
CAPN3-208ENST00000397204 FAM155AB1AL88 458 aaPredicted RBP11.32□□□□□ -0.6
CAPN3-208ENST00000397204 EGFRP00533 1210 aa11.32□□□□□ -0.6
CAPN3-208ENST00000397204 PCCAP05165 728 aaPredicted RBP11.32□□□□□ -0.6
CAPN3-208ENST00000397204 ZNF157P51786 506 aaPredicted RBP11.32□□□□□ -0.6
CAPN3-208ENST00000397204 GNAI1P63096 354 aa11.32□□□□□ -0.6
CAPN3-208ENST00000397204 KIF23Q02241 960 aaPredicted RBP11.32□□□□□ -0.6
CAPN3-208ENST00000397204 CALD1Q05682 793 aaKnown RBP11.32□□□□□ -0.6
CAPN3-208ENST00000397204 DGKZQ13574 1117 aa11.32□□□□□ -0.6
CAPN3-208ENST00000397204 CCDC152Q4G0S7 254 aa11.32□□□□□ -0.6
CAPN3-208ENST00000397204 SULF1Q8IWU6 871 aa11.32□□□□□ -0.6
CAPN3-208ENST00000397204 AGBL3Q8NEM8 1001 aa11.32□□□□□ -0.6
CAPN3-208ENST00000397204 SEC31BQ9NQW1 1179 aa11.32□□□□□ -0.6
CAPN3-208ENST00000397204 MBIPQ9NS73 344 aa11.32□□□□□ -0.6
CAPN3-208ENST00000397204 SAGE1Q9NXZ1 904 aa11.32□□□□□ -0.6
CAPN3-208ENST00000397204 GGA1Q9UJY5 639 aa11.32□□□□□ -0.6
CAPN3-208ENST00000397204 RTL9Q8NET4 1388 aa11.31□□□□□ -0.6
CAPN3-208ENST00000397204 PDE8AO60658 829 aa11.31□□□□□ -0.6
CAPN3-208ENST00000397204 ZNF280AP59817 542 aaPredicted RBP11.31□□□□□ -0.6
CAPN3-208ENST00000397204 KIF4BQ2VIQ3 1234 aa11.31□□□□□ -0.6
CAPN3-208ENST00000397204 RSBN1LQ6PCB5 846 aaPredicted RBP11.31□□□□□ -0.6
CAPN3-208ENST00000397204 MARVELD3Q96A59 401 aa11.31□□□□□ -0.6
CAPN3-208ENST00000397204 PHAXQ9H814 394 aaKnown RBP11.31□□□□□ -0.6
CAPN3-208ENST00000397204 GPHNQ9NQX3 736 aaPredicted RBP11.31□□□□□ -0.6
CAPN3-208ENST00000397204 IFT57Q9NWB7 429 aa11.31□□□□□ -0.6
CAPN3-208ENST00000397204 DUOX1Q9NRD9 1551 aa11.3□□□□□ -0.6
CAPN3-208ENST00000397204 ADM5C9JUS6 153 aa11.3□□□□□ -0.6
CAPN3-208ENST00000397204 ELL2O00472 640 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-208ENST00000397204 UFL1O94874 794 aa11.3□□□□□ -0.6
CAPN3-208ENST00000397204 DDX58O95786 925 aaKnown RBP11.3□□□□□ -0.6
CAPN3-208ENST00000397204 FKBP1BP68106 108 aa11.3□□□□□ -0.6
CAPN3-208ENST00000397204 SCARF1Q14162 830 aa11.3□□□□□ -0.6
CAPN3-208ENST00000397204 PODNQ7Z5L7 613 aa11.3□□□□□ -0.6
CAPN3-208ENST00000397204 CSRNP1Q96S65 589 aa11.3□□□□□ -0.6
CAPN3-208ENST00000397204 GMLQ99445 158 aa11.3□□□□□ -0.6
CAPN3-208ENST00000397204 MYD88Q99836 296 aa11.3□□□□□ -0.6
CAPN3-208ENST00000397204 CWC25Q9NXE8 425 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-208ENST00000397204 APAF1O14727 1248 aa11.29□□□□□ -0.6
CAPN3-208ENST00000397204 TRPA1O75762 1119 aa11.29□□□□□ -0.6
CAPN3-208ENST00000397204 USP17L8P0C7I0 530 aa11.29□□□□□ -0.6
CAPN3-208ENST00000397204 ATP2B4P23634 1241 aa11.29□□□□□ -0.6
CAPN3-208ENST00000397204 ANKRD18AQ8IVF6 992 aa11.29□□□□□ -0.6
CAPN3-208ENST00000397204 METTL22Q9BUU2 404 aaPredicted RBP11.29□□□□□ -0.6
CAPN3-208ENST00000397204 RNF186Q9NXI6 227 aa11.29□□□□□ -0.6
CAPN3-208ENST00000397204 GGA3Q9NZ52 723 aa11.29□□□□□ -0.6
CAPN3-208ENST00000397204 XDHP47989 1333 aa11.29□□□□□ -0.6
CAPN3-208ENST00000397204 USP17L3A6NCW0 530 aa11.28□□□□□ -0.6
CAPN3-208ENST00000397204 USP17L4A6NCW7 530 aa11.28□□□□□ -0.6
CAPN3-208ENST00000397204 SLC34A2O95436 690 aa11.28□□□□□ -0.6
CAPN3-208ENST00000397204 SLC10A3P09131 477 aa11.28□□□□□ -0.6
CAPN3-208ENST00000397204 MMP14P50281 582 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms