RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 PI4KAP2A4QPH2 592 aa22.48■■□□□ 1.19
EXOSC3-202ENST00000396521 NOM1Q5C9Z4 860 aaKnown RBP22.48■■□□□ 1.19
EXOSC3-202ENST00000396521 PI4KAP1Q8N8J0 262 aa22.48■■□□□ 1.19
EXOSC3-202ENST00000396521 PCDH10Q9P2E7 1040 aa22.48■■□□□ 1.19
EXOSC3-202ENST00000396521 SCN9AQ15858 1988 aa22.47■■□□□ 1.19
EXOSC3-202ENST00000396521 CCT4P50991 539 aaKnown RBP22.47■■□□□ 1.19
EXOSC3-202ENST00000396521 DACT2Q5SW24 774 aa22.47■■□□□ 1.19
EXOSC3-202ENST00000396521 PAPPA2Q9BXP8 1791 aa22.46■■□□□ 1.19
EXOSC3-202ENST00000396521 IGHMBP2P38935 993 aaKnown RBP22.46■■□□□ 1.19
EXOSC3-202ENST00000396521 JARID2Q92833 1246 aaPredicted RBP22.46■■□□□ 1.19
EXOSC3-202ENST00000396521 ANKRD2Q9GZV1 360 aa22.46■■□□□ 1.19
EXOSC3-202ENST00000396521 IGKV5-2P06315 115 aa22.45■■□□□ 1.18
EXOSC3-202ENST00000396521 TM4SF4P48230 202 aa22.45■■□□□ 1.18
EXOSC3-202ENST00000396521 GREM2Q9H772 168 aa22.45■■□□□ 1.18
EXOSC3-202ENST00000396521 HDAC9Q9UKV0 1011 aa22.45■■□□□ 1.18
EXOSC3-202ENST00000396521 WNT10BO00744 389 aa22.44■■□□□ 1.18
EXOSC3-202ENST00000396521 SREBF2Q12772 1141 aa22.44■■□□□ 1.18
EXOSC3-202ENST00000396521 NBPF9Q3BBW0 867 aa22.44■■□□□ 1.18
EXOSC3-202ENST00000396521 PDE4DIPQ5VU43 2346 aa22.44■■□□□ 1.18
EXOSC3-202ENST00000396521 PLA2G12BQ9BX93 195 aa22.44■■□□□ 1.18
EXOSC3-202ENST00000396521 NEURL1BA8MQ27 555 aa22.43■■□□□ 1.18
EXOSC3-202ENST00000396521 UBE2Q2LH0YL09 131 aa22.43■■□□□ 1.18
EXOSC3-202ENST00000396521 H7C1W4 665 aa22.43■■□□□ 1.18
EXOSC3-202ENST00000396521 TTLL12Q14166 644 aaPredicted RBP22.43■■□□□ 1.18
EXOSC3-202ENST00000396521 ARMC9Q7Z3E5 817 aa22.43■■□□□ 1.18
EXOSC3-202ENST00000396521 APOBEC3FQ8IUX4 373 aaKnown RBP22.43■■□□□ 1.18
EXOSC3-202ENST00000396521 AKAP11Q9UKA4 1901 aa22.42■■□□□ 1.18
EXOSC3-202ENST00000396521 CCDC27Q2M243 656 aa22.42■■□□□ 1.18
EXOSC3-202ENST00000396521 TTLL5Q6EMB2 1281 aa22.42■■□□□ 1.18
EXOSC3-202ENST00000396521 ZNF804BA4D1E1 1349 aa22.41■■□□□ 1.18
EXOSC3-202ENST00000396521 TSPYL6Q8N831 410 aa22.41■■□□□ 1.18
EXOSC3-202ENST00000396521 MPHOSPH8Q99549 860 aa22.41■■□□□ 1.18
EXOSC3-202ENST00000396521 CFHR5Q9BXR6 569 aa22.41■■□□□ 1.18
EXOSC3-202ENST00000396521 NCBP3Q53F19 620 aaKnown RBP22.4■■□□□ 1.18
EXOSC3-202ENST00000396521 UBE3BQ7Z3V4 1068 aa22.4■■□□□ 1.18
EXOSC3-202ENST00000396521 MYH16Q9H6N6 1097 aa22.4■■□□□ 1.18
EXOSC3-202ENST00000396521 PSME4Q14997 1843 aa22.4■■□□□ 1.18
EXOSC3-202ENST00000396521 ALDH1A1P00352 501 aa22.39■■□□□ 1.17
EXOSC3-202ENST00000396521 SOX10P56693 466 aa22.39■■□□□ 1.17
EXOSC3-202ENST00000396521 INHBEP58166 350 aa22.39■■□□□ 1.17
EXOSC3-202ENST00000396521 CWF19L2Q2TBE0 894 aaKnown RBP22.39■■□□□ 1.17
EXOSC3-202ENST00000396521 ZNF296Q8WUU4 475 aaPredicted RBP22.39■■□□□ 1.17
EXOSC3-202ENST00000396521 FBXW7Q969H0 707 aa22.39■■□□□ 1.17
EXOSC3-202ENST00000396521 HPS5Q9UPZ3 1129 aa22.39■■□□□ 1.17
EXOSC3-202ENST00000396521 UNCXA6NJT0 531 aa22.38■■□□□ 1.17
EXOSC3-202ENST00000396521 SLC4A2P04920 1241 aa22.38■■□□□ 1.17
EXOSC3-202ENST00000396521 CSF1RP07333 972 aa22.38■■□□□ 1.17
EXOSC3-202ENST00000396521 ITGA6P23229 1130 aa22.38■■□□□ 1.17
EXOSC3-202ENST00000396521 GCKRQ14397 625 aa22.38■■□□□ 1.17
EXOSC3-202ENST00000396521 TWISTNBQ3B726 338 aaPredicted RBP22.38■■□□□ 1.17
EXOSC3-202ENST00000396521 MOB2Q70IA6 237 aa22.38■■□□□ 1.17
EXOSC3-202ENST00000396521 IL16Q14005 1332 aa22.37■■□□□ 1.17
EXOSC3-202ENST00000396521 WTIPA6NIX2 430 aaPredicted RBP22.37■■□□□ 1.17
EXOSC3-202ENST00000396521 GPR25O00155 361 aa22.37■■□□□ 1.17
EXOSC3-202ENST00000396521 KCNJ4P48050 445 aa22.37■■□□□ 1.17
EXOSC3-202ENST00000396521 PRAMEF18Q5VWM3 479 aa22.37■■□□□ 1.17
EXOSC3-202ENST00000396521 TBC1D8O95759 1140 aa22.36■■□□□ 1.17
EXOSC3-202ENST00000396521 LDLRAD1Q5T700 205 aa22.36■■□□□ 1.17
EXOSC3-202ENST00000396521 LINS1Q8NG48 757 aa22.36■■□□□ 1.17
EXOSC3-202ENST00000396521 ZBED3Q96IU2 234 aaPredicted RBP22.36■■□□□ 1.17
EXOSC3-202ENST00000396521 MXD3Q9BW11 206 aa22.36■■□□□ 1.17
EXOSC3-202ENST00000396521 PPP2R3BQ9Y5P8 575 aa22.36■■□□□ 1.17
EXOSC3-202ENST00000396521 COL1A1P02452 1464 aaPredicted RBP22.35■■□□□ 1.17
EXOSC3-202ENST00000396521 PRPF38BQ5VTL8 546 aaKnown RBP22.35■■□□□ 1.17
EXOSC3-202ENST00000396521 FBXO46Q6PJ61 603 aaPredicted RBP22.35■■□□□ 1.17
EXOSC3-202ENST00000396521 C15orf52Q6ZUT6 534 aaKnown RBP22.35■■□□□ 1.17
EXOSC3-202ENST00000396521 TXNRD3Q86VQ6 643 aa22.35■■□□□ 1.17
EXOSC3-202ENST00000396521 KIAA0825Q8IV33 1275 aa22.35■■□□□ 1.17
EXOSC3-202ENST00000396521 MTMR14Q8NCE2 650 aa22.35■■□□□ 1.17
EXOSC3-202ENST00000396521 TNRC18O15417 2968 aaPredicted RBP22.35■■□□□ 1.17
EXOSC3-202ENST00000396521 FKTNO75072 461 aa22.34■■□□□ 1.17
EXOSC3-202ENST00000396521 SASH1O94885 1247 aa22.34■■□□□ 1.17
EXOSC3-202ENST00000396521 GTF2IP78347 998 aa22.34■■□□□ 1.17
EXOSC3-202ENST00000396521 PTPN12Q05209 780 aaKnown RBP22.34■■□□□ 1.17
EXOSC3-202ENST00000396521 FLIIQ13045 1269 aa22.34■■□□□ 1.17
EXOSC3-202ENST00000396521 DLGAP5Q15398 846 aa22.34■■□□□ 1.17
EXOSC3-202ENST00000396521 WWC1Q8IX03 1113 aa22.34■■□□□ 1.17
EXOSC3-202ENST00000396521 TSR2Q969E8 191 aaKnown RBP22.34■■□□□ 1.17
EXOSC3-202ENST00000396521 ANKRD18BA2A2Z9 1011 aa22.33■■□□□ 1.17
EXOSC3-202ENST00000396521 MANSC4A6NHS7 340 aaPredicted RBP22.33■■□□□ 1.17
EXOSC3-202ENST00000396521 MYO1BO43795 1136 aa22.33■■□□□ 1.17
EXOSC3-202ENST00000396521 PPP1R12BO60237 982 aaPredicted RBP22.33■■□□□ 1.17
EXOSC3-202ENST00000396521 SPRYD7Q5W111 196 aa22.33■■□□□ 1.17
EXOSC3-202ENST00000396521 DNAAF4Q8WXU2 420 aa22.33■■□□□ 1.17
EXOSC3-202ENST00000396521 DEFB129Q9H1M3 183 aa22.33■■□□□ 1.17
EXOSC3-202ENST00000396521 CD209Q9NNX6 404 aa22.33■■□□□ 1.17
EXOSC3-202ENST00000396521 SCAF8Q9UPN6 1271 aaKnown RBP22.33■■□□□ 1.17
EXOSC3-202ENST00000396521 ZBTB48P10074 688 aaPredicted RBP22.32■■□□□ 1.16
EXOSC3-202ENST00000396521 CASP7P55210 303 aa22.32■■□□□ 1.16
EXOSC3-202ENST00000396521 FKBP1AP62942 108 aaKnown RBP22.32■■□□□ 1.16
EXOSC3-202ENST00000396521 CHRNDQ07001 517 aa22.32■■□□□ 1.16
EXOSC3-202ENST00000396521 FKBP5Q13451 457 aaPredicted RBP22.32■■□□□ 1.16
EXOSC3-202ENST00000396521 MAP3K11Q16584 847 aa22.32■■□□□ 1.16
EXOSC3-202ENST00000396521 SLC10A4Q96EP9 437 aa22.32■■□□□ 1.16
EXOSC3-202ENST00000396521 SUPT20HL1Q3ZLR7 823 aa22.31■■□□□ 1.16
EXOSC3-202ENST00000396521 G2E3Q7L622 706 aa22.31■■□□□ 1.16
EXOSC3-202ENST00000396521 ANGEL1Q9UNK9 670 aaKnown RBP22.31■■□□□ 1.16
EXOSC3-202ENST00000396521 IFIT5Q13325 482 aaKnown RBP22.3■■□□□ 1.16
EXOSC3-202ENST00000396521 ZNF804AQ7Z570 1209 aa22.3■■□□□ 1.16
EXOSC3-202ENST00000396521 MYH3P11055 1940 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms