RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 GMLQ99445 158 aa23.22■■□□□ 1.31
FXN-203ENST00000396366 C9orf78Q9NZ63 289 aaPredicted RBP23.22■■□□□ 1.31
FXN-203ENST00000396366 LEMD3Q9Y2U8 911 aa23.22■■□□□ 1.31
FXN-203ENST00000396366 ZNF804BA4D1E1 1349 aa23.22■■□□□ 1.31
FXN-203ENST00000396366 TAF5LO75529 589 aa23.21■■□□□ 1.31
FXN-203ENST00000396366 ALDH1L1O75891 902 aa23.21■■□□□ 1.31
FXN-203ENST00000396366 IFIT5Q13325 482 aaKnown RBP23.21■■□□□ 1.31
FXN-203ENST00000396366 AGBL3Q8NEM8 1001 aa23.21■■□□□ 1.31
FXN-203ENST00000396366 SSH1Q8WYL5 1049 aa23.21■■□□□ 1.31
FXN-203ENST00000396366 SRCIN1Q9C0H9 1055 aa23.21■■□□□ 1.31
FXN-203ENST00000396366 ANKRD2Q9GZV1 360 aa23.21■■□□□ 1.31
FXN-203ENST00000396366 ADM5C9JUS6 153 aa23.2■■□□□ 1.3
FXN-203ENST00000396366 ZNF280AP59817 542 aaPredicted RBP23.2■■□□□ 1.3
FXN-203ENST00000396366 SAPCD2Q86UD0 394 aa23.2■■□□□ 1.3
FXN-203ENST00000396366 CAPNS2Q96L46 248 aa23.2■■□□□ 1.3
FXN-203ENST00000396366 NBPF7P0C2Y1 421 aaPredicted RBP23.19■■□□□ 1.3
FXN-203ENST00000396366 DACT2Q5SW24 774 aa23.19■■□□□ 1.3
FXN-203ENST00000396366 KRT26Q7Z3Y9 468 aa23.19■■□□□ 1.3
FXN-203ENST00000396366 FBXW7Q969H0 707 aa23.19■■□□□ 1.3
FXN-203ENST00000396366 DCPSQ96C86 337 aaKnown RBP23.19■■□□□ 1.3
FXN-203ENST00000396366 KAZALD1Q96I82 304 aa23.19■■□□□ 1.3
FXN-203ENST00000396366 WBP1LQ9NX94 342 aa23.19■■□□□ 1.3
FXN-203ENST00000396366 ZNF646O15015 1829 aaPredicted RBP23.18■■□□□ 1.3
FXN-203ENST00000396366 USP17L8P0C7I0 530 aa23.18■■□□□ 1.3
FXN-203ENST00000396366 SCARF1Q14162 830 aa23.18■■□□□ 1.3
FXN-203ENST00000396366 SUCLG2Q96I99 432 aa23.18■■□□□ 1.3
FXN-203ENST00000396366 COA1Q9GZY4 146 aa23.18■■□□□ 1.3
FXN-203ENST00000396366 KCNJ4P48050 445 aa23.17■■□□□ 1.3
FXN-203ENST00000396366 GGA3Q9NZ52 723 aa23.17■■□□□ 1.3
FXN-203ENST00000396366 ZNF609O15014 1411 aa23.16■■□□□ 1.3
FXN-203ENST00000396366 CCER2I3L3R5 266 aa23.16■■□□□ 1.3
FXN-203ENST00000396366 AOC2O75106 756 aa23.16■■□□□ 1.3
FXN-203ENST00000396366 CCDC57Q2TAC2 916 aa23.16■■□□□ 1.3
FXN-203ENST00000396366 MYOZ2Q9NPC6 264 aa23.16■■□□□ 1.3
FXN-203ENST00000396366 SCAF8Q9UPN6 1271 aaKnown RBP23.16■■□□□ 1.3
FXN-203ENST00000396366 A0A1B0GUL6 1792 aa23.16■■□□□ 1.3
FXN-203ENST00000396366 IRS2Q9Y4H2 1338 aa23.15■■□□□ 1.3
FXN-203ENST00000396366 ECE1P42892 770 aa23.15■■□□□ 1.3
FXN-203ENST00000396366 ANGEL2Q5VTE6 544 aaKnown RBP23.15■■□□□ 1.3
FXN-203ENST00000396366 TRMT2AQ8IZ69 625 aaKnown RBP23.15■■□□□ 1.3
FXN-203ENST00000396366 PLIN1O60240 522 aa23.14■■□□□ 1.29
FXN-203ENST00000396366 STRIP1Q5VSL9 837 aa23.14■■□□□ 1.29
FXN-203ENST00000396366 LDHAL6AQ6ZMR3 332 aa23.14■■□□□ 1.29
FXN-203ENST00000396366 TNS4Q8IZW8 715 aa23.14■■□□□ 1.29
FXN-203ENST00000396366 AIDAQ96BJ3 306 aa23.14■■□□□ 1.29
FXN-203ENST00000396366 UTYO14607 1347 aa23.13■■□□□ 1.29
FXN-203ENST00000396366 GTF2IP78347 998 aa23.13■■□□□ 1.29
FXN-203ENST00000396366 TAF7LQ5H9L4 462 aa23.13■■□□□ 1.29
FXN-203ENST00000396366 TTLL5Q6EMB2 1281 aa23.13■■□□□ 1.29
FXN-203ENST00000396366 PUS3Q9BZE2 481 aaKnown RBP23.13■■□□□ 1.29
FXN-203ENST00000396366 CD209Q9NNX6 404 aa23.13■■□□□ 1.29
FXN-203ENST00000396366 PTPRCP08575 1304 aa23.12■■□□□ 1.29
FXN-203ENST00000396366 NBPF9Q3BBW0 867 aa23.12■■□□□ 1.29
FXN-203ENST00000396366 SULF1Q8IWU6 871 aa23.12■■□□□ 1.29
FXN-203ENST00000396366 CNNM1Q9NRU3 951 aa23.12■■□□□ 1.29
FXN-203ENST00000396366 CTCFP49711 727 aaPredicted RBP23.11■■□□□ 1.29
FXN-203ENST00000396366 LBX1P52954 281 aa23.11■■□□□ 1.29
FXN-203ENST00000396366 HUNKP57058 714 aa23.11■■□□□ 1.29
FXN-203ENST00000396366 MAP2K1Q02750 393 aaPredicted RBP23.11■■□□□ 1.29
FXN-203ENST00000396366 BICC1Q9H694 974 aaKnown RBP23.11■■□□□ 1.29
FXN-203ENST00000396366 THSD7BQ9C0I4 1608 aa23.11■■□□□ 1.29
FXN-203ENST00000396366 C15orf52Q6ZUT6 534 aaKnown RBP23.1■■□□□ 1.29
FXN-203ENST00000396366 ANKRD44Q8N8A2 993 aa23.1■■□□□ 1.29
FXN-203ENST00000396366 CDCA5Q96FF9 252 aa23.1■■□□□ 1.29
FXN-203ENST00000396366 HHIPL1Q96JK4 782 aa23.1■■□□□ 1.29
FXN-203ENST00000396366 GBA2Q9HCG7 927 aaPredicted RBP23.1■■□□□ 1.29
FXN-203ENST00000396366 ALDH1L2Q3SY69 923 aa23.09■■□□□ 1.29
FXN-203ENST00000396366 KIAA0825Q8IV33 1275 aa23.09■■□□□ 1.29
FXN-203ENST00000396366 ZIC5Q96T25 663 aa23.09■■□□□ 1.29
FXN-203ENST00000396366 USP44Q9H0E7 712 aa23.09■■□□□ 1.29
FXN-203ENST00000396366 SMC4Q9NTJ3 1288 aa23.09■■□□□ 1.29
FXN-203ENST00000396366 HSPA8P11142 646 aaKnown RBP23.08■■□□□ 1.29
FXN-203ENST00000396366 OGFOD1Q8N543 542 aa23.08■■□□□ 1.29
FXN-203ENST00000396366 CERS5Q8N5B7 392 aa23.08■■□□□ 1.29
FXN-203ENST00000396366 JAG2Q9Y219 1238 aa23.08■■□□□ 1.29
FXN-203ENST00000396366 MYO3BQ8WXR4 1341 aa23.08■■□□□ 1.28
FXN-203ENST00000396366 CAPN15O75808 1086 aa23.07■■□□□ 1.28
FXN-203ENST00000396366 SASH1O94885 1247 aa23.07■■□□□ 1.28
FXN-203ENST00000396366 MAP2K2P36507 400 aa23.07■■□□□ 1.28
FXN-203ENST00000396366 RABL6Q3YEC7 729 aaPredicted RBP23.07■■□□□ 1.28
FXN-203ENST00000396366 PRAMEF18Q5VWM3 479 aa23.07■■□□□ 1.28
FXN-203ENST00000396366 C2orf69Q8N8R5 385 aa23.07■■□□□ 1.28
FXN-203ENST00000396366 WNT10BO00744 389 aa23.06■■□□□ 1.28
FXN-203ENST00000396366 IL1R1P14778 569 aa23.06■■□□□ 1.28
FXN-203ENST00000396366 PRDM10Q9NQV6 1147 aa23.06■■□□□ 1.28
FXN-203ENST00000396366 TSKSQ9UJT2 592 aa23.06■■□□□ 1.28
FXN-203ENST00000396366 RIPOR2Q9Y4F9 1068 aa23.06■■□□□ 1.28
FXN-203ENST00000396366 LRRC24Q50LG9 513 aa23.05■■□□□ 1.28
FXN-203ENST00000396366 ZNF804AQ7Z570 1209 aa23.05■■□□□ 1.28
FXN-203ENST00000396366 KLHDC4Q8TBB5 520 aa23.05■■□□□ 1.28
FXN-203ENST00000396366 NOB1Q9ULX3 412 aaKnown RBP23.05■■□□□ 1.28
FXN-203ENST00000396366 RGMBQ6NW40 437 aa23.04■■□□□ 1.28
FXN-203ENST00000396366 PCDHAC2Q9Y5I4 1007 aa23.04■■□□□ 1.28
FXN-203ENST00000396366 PITPNM2Q9BZ72 1349 aa23.04■■□□□ 1.28
FXN-203ENST00000396366 FAM155AB1AL88 458 aaPredicted RBP23.03■■□□□ 1.28
FXN-203ENST00000396366 F8W031 263 aaPredicted RBP23.03■■□□□ 1.28
FXN-203ENST00000396366 GYG1P46976 350 aa23.03■■□□□ 1.28
FXN-203ENST00000396366 MOB2Q70IA6 237 aa23.03■■□□□ 1.28
FXN-203ENST00000396366 BEGAINQ9BUH8 593 aa23.03■■□□□ 1.28
FXN-203ENST00000396366 ZBED3Q96IU2 234 aaPredicted RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms