RNA–Protein interactions for RNA: ENST00000396215.7

LDHC-202, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-202ENST00000396215 MKRN3Q13064 507 aaKnown RBP12.72□□□□□ -0.37
LDHC-202ENST00000396215 TTLL12Q14166 644 aaPredicted RBP12.72□□□□□ -0.37
LDHC-202ENST00000396215 PRAMEF18Q5VWM3 479 aa12.72□□□□□ -0.37
LDHC-202ENST00000396215 ARMC9Q7Z3E5 817 aa12.72□□□□□ -0.37
LDHC-202ENST00000396215 PODNQ7Z5L7 613 aa12.72□□□□□ -0.37
LDHC-202ENST00000396215 ZNF333Q96JL9 665 aa12.72□□□□□ -0.37
LDHC-202ENST00000396215 USP17L3A6NCW0 530 aa12.71□□□□□ -0.37
LDHC-202ENST00000396215 USP17L4A6NCW7 530 aa12.71□□□□□ -0.37
LDHC-202ENST00000396215 UNCXA6NJT0 531 aa12.71□□□□□ -0.37
LDHC-202ENST00000396215 ZBTB48P10074 688 aaPredicted RBP12.71□□□□□ -0.37
LDHC-202ENST00000396215 MAP3K11Q16584 847 aa12.71□□□□□ -0.37
LDHC-202ENST00000396215 NBPF9Q3BBW0 867 aa12.71□□□□□ -0.37
LDHC-202ENST00000396215 USP17L1Q7RTZ2 530 aa12.71□□□□□ -0.37
LDHC-202ENST00000396215 SLC17A8Q8NDX2 589 aa12.71□□□□□ -0.37
LDHC-202ENST00000396215 XAGE3Q8WTP9 111 aa12.71□□□□□ -0.37
LDHC-202ENST00000396215 ISCA1Q9BUE6 129 aa12.71□□□□□ -0.37
LDHC-202ENST00000396215 TMEM106CQ9BVX2 250 aa12.71□□□□□ -0.37
LDHC-202ENST00000396215 BABAM1Q9NWV8 329 aa12.71□□□□□ -0.37
LDHC-202ENST00000396215 G3V3G9 751 aa12.7□□□□□ -0.38
LDHC-202ENST00000396215 H0YGN5 161 aa12.7□□□□□ -0.38
LDHC-202ENST00000396215 WNT10BO00744 389 aa12.7□□□□□ -0.38
LDHC-202ENST00000396215 UFL1O94874 794 aa12.7□□□□□ -0.38
LDHC-202ENST00000396215 ANXA1P04083 346 aa12.7□□□□□ -0.38
LDHC-202ENST00000396215 EIF2S2P20042 333 aaKnown RBP12.7□□□□□ -0.38
LDHC-202ENST00000396215 DCAF8Q5TAQ9 597 aa12.7□□□□□ -0.38
LDHC-202ENST00000396215 EFCC1Q9HA90 598 aa12.7□□□□□ -0.38
LDHC-202ENST00000396215 GGA1Q9UJY5 639 aa12.7□□□□□ -0.38
LDHC-202ENST00000396215 SCAF8Q9UPN6 1271 aaKnown RBP12.7□□□□□ -0.38
LDHC-202ENST00000396215 IGF2BP3O00425 579 aaKnown RBP eCLIP12.69□□□□□ -0.38
LDHC-202ENST00000396215 TRIM28Q13263 835 aaKnown RBP12.69□□□□□ -0.38
LDHC-202ENST00000396215 FAM89AQ96GI7 184 aa12.69□□□□□ -0.38
LDHC-202ENST00000396215 PLEKHF1Q96S99 279 aa12.69□□□□□ -0.38
LDHC-202ENST00000396215 ZNF646O15015 1829 aaPredicted RBP12.68□□□□□ -0.38
LDHC-202ENST00000396215 PPP2R1AP30153 589 aa12.68□□□□□ -0.38
LDHC-202ENST00000396215 EVX2Q03828 476 aa12.68□□□□□ -0.38
LDHC-202ENST00000396215 AIMP1Q12904 312 aaKnown RBP12.68□□□□□ -0.38
LDHC-202ENST00000396215 NFE2L2Q16236 605 aa12.68□□□□□ -0.38
LDHC-202ENST00000396215 CD99L2Q8TCZ2 262 aa12.68□□□□□ -0.38
LDHC-202ENST00000396215 PRO3102Q9H379 93 aa12.68□□□□□ -0.38
LDHC-202ENST00000396215 ANKIB1Q9P2G1 1089 aa12.68□□□□□ -0.38
LDHC-202ENST00000396215 MYO3BQ8WXR4 1341 aa12.67□□□□□ -0.38
LDHC-202ENST00000396215 COL1A1P02452 1464 aaPredicted RBP12.67□□□□□ -0.38
LDHC-202ENST00000396215 TESPA1A2RU30 521 aaPredicted RBP12.67□□□□□ -0.38
LDHC-202ENST00000396215 NEFMP07197 916 aa12.67□□□□□ -0.38
LDHC-202ENST00000396215 CAP1Q01518 475 aa12.67□□□□□ -0.38
LDHC-202ENST00000396215 SP3Q02447 781 aa12.67□□□□□ -0.38
LDHC-202ENST00000396215 DACT2Q5SW24 774 aa12.67□□□□□ -0.38
LDHC-202ENST00000396215 NBPF11Q86T75 865 aa12.67□□□□□ -0.38
LDHC-202ENST00000396215 APOBEC3FQ8IUX4 373 aaKnown RBP12.67□□□□□ -0.38
LDHC-202ENST00000396215 OGFOD1Q8N543 542 aa12.67□□□□□ -0.38
LDHC-202ENST00000396215 PLBD2Q8NHP8 589 aa12.67□□□□□ -0.38
LDHC-202ENST00000396215 SLC10A4Q96EP9 437 aa12.67□□□□□ -0.38
LDHC-202ENST00000396215 ZBED3Q96IU2 234 aaPredicted RBP12.67□□□□□ -0.38
LDHC-202ENST00000396215 TSPYL4Q9UJ04 414 aa12.67□□□□□ -0.38
LDHC-202ENST00000396215 UNC80Q8N2C7 3258 aa12.67□□□□□ -0.38
LDHC-202ENST00000396215 IRS4O14654 1257 aaPredicted RBP12.66□□□□□ -0.38
LDHC-202ENST00000396215 CRHR2Q13324 411 aa12.66□□□□□ -0.38
LDHC-202ENST00000396215 OTUD7BQ6GQQ9 843 aa12.66□□□□□ -0.38
LDHC-202ENST00000396215 WNK4Q96J92 1243 aa12.66□□□□□ -0.38
LDHC-202ENST00000396215 RBM27Q9P2N5 1060 aaKnown RBP12.66□□□□□ -0.38
LDHC-202ENST00000396215 ANGEL1Q9UNK9 670 aaKnown RBP12.66□□□□□ -0.38
LDHC-202ENST00000396215 XDHP47989 1333 aa12.65□□□□□ -0.38
LDHC-202ENST00000396215 ATP2B4P23634 1241 aa12.65□□□□□ -0.38
LDHC-202ENST00000396215 MNX1P50219 401 aaPredicted RBP12.65□□□□□ -0.38
LDHC-202ENST00000396215 ARHGEF6Q15052 776 aa12.65□□□□□ -0.38
LDHC-202ENST00000396215 STRIP1Q5VSL9 837 aa12.65□□□□□ -0.38
LDHC-202ENST00000396215 ANKRD13DQ6ZTN6 518 aa12.65□□□□□ -0.38
LDHC-202ENST00000396215 SEC31BQ9NQW1 1179 aa12.65□□□□□ -0.38
LDHC-202ENST00000396215 C19orf67A6NJJ6 358 aa12.64□□□□□ -0.39
LDHC-202ENST00000396215 HSP90B1P14625 803 aaKnown RBP12.64□□□□□ -0.39
LDHC-202ENST00000396215 CNGB1Q14028 1251 aaPredicted RBP12.64□□□□□ -0.39
LDHC-202ENST00000396215 SLC9C1Q4G0N8 1177 aa12.64□□□□□ -0.39
LDHC-202ENST00000396215 PTPN18Q99952 460 aa12.64□□□□□ -0.39
LDHC-202ENST00000396215 PRKG1Q13976 671 aa12.63□□□□□ -0.39
LDHC-202ENST00000396215 ZBTB38Q8NAP3 1195 aaPredicted RBP12.63□□□□□ -0.39
LDHC-202ENST00000396215 FARP1Q9Y4F1 1045 aaPredicted RBP12.63□□□□□ -0.39
LDHC-202ENST00000396215 PPP2R3BQ9Y5P8 575 aa12.63□□□□□ -0.39
LDHC-202ENST00000396215 PTCH2Q9Y6C5 1203 aa12.63□□□□□ -0.39
LDHC-202ENST00000396215 MED23Q9ULK4 1368 aa12.63□□□□□ -0.39
LDHC-202ENST00000396215 SSC5DA1L4H1 1573 aa12.62□□□□□ -0.39
LDHC-202ENST00000396215 A0A1W2PPC1 479 aa12.62□□□□□ -0.39
LDHC-202ENST00000396215 ATP5J2-PTCD1G3V325 749 aa12.62□□□□□ -0.39
LDHC-202ENST00000396215 PPP1R12BO60237 982 aaPredicted RBP12.62□□□□□ -0.39
LDHC-202ENST00000396215 SLC4A8Q2Y0W8 1093 aa12.62□□□□□ -0.39
LDHC-202ENST00000396215 CCDC152Q4G0S7 254 aa12.62□□□□□ -0.39
LDHC-202ENST00000396215 CLMNQ96JQ2 1002 aa12.62□□□□□ -0.39
LDHC-202ENST00000396215 DEFB129Q9H1M3 183 aa12.62□□□□□ -0.39
LDHC-202ENST00000396215 SASH1O94885 1247 aa12.61□□□□□ -0.39
LDHC-202ENST00000396215 GJA5P36382 358 aa12.61□□□□□ -0.39
LDHC-202ENST00000396215 MTMR14Q8NCE2 650 aa12.61□□□□□ -0.39
LDHC-202ENST00000396215 ZNF428Q96B54 188 aa12.61□□□□□ -0.39
LDHC-202ENST00000396215 MXD3Q9BW11 206 aa12.61□□□□□ -0.39
LDHC-202ENST00000396215 COA1Q9GZY4 146 aa12.61□□□□□ -0.39
LDHC-202ENST00000396215 PNNQ9H307 717 aaKnown RBP12.61□□□□□ -0.39
LDHC-202ENST00000396215 FZD1Q9UP38 647 aa12.61□□□□□ -0.39
LDHC-202ENST00000396215 TRIM26Q12899 539 aaPredicted RBP12.6□□□□□ -0.39
LDHC-202ENST00000396215 RTL5Q5HYW3 569 aaPredicted RBP12.6□□□□□ -0.39
LDHC-202ENST00000396215 UBE2Q1Q7Z7E8 422 aa12.6□□□□□ -0.39
LDHC-202ENST00000396215 MS4A4AQ96JQ5 239 aa12.6□□□□□ -0.39
LDHC-202ENST00000396215 CHPF2Q9P2E5 772 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms