RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 SHTN1A0MZ66 631 aa12.54□□□□□ -0.4
THUMPD1-202ENST00000396083 TIMM10P62072 90 aa12.54□□□□□ -0.4
THUMPD1-202ENST00000396083 ZNRF3Q9ULT6 936 aa12.54□□□□□ -0.4
THUMPD1-202ENST00000396083 PDE8BO95263 885 aa12.53□□□□□ -0.4
THUMPD1-202ENST00000396083 ATP8B2P98198 1209 aa12.53□□□□□ -0.4
THUMPD1-202ENST00000396083 TFCP2Q12800 502 aa12.53□□□□□ -0.4
THUMPD1-202ENST00000396083 FZD9O00144 591 aa12.53□□□□□ -0.4
THUMPD1-202ENST00000396083 PSMD14O00487 310 aa12.53□□□□□ -0.4
THUMPD1-202ENST00000396083 ERICH6Q7L0X2 663 aa12.53□□□□□ -0.4
THUMPD1-202ENST00000396083 VPS37DQ86XT2 251 aa12.53□□□□□ -0.4
THUMPD1-202ENST00000396083 SIRT2Q8IXJ6 389 aa12.53□□□□□ -0.4
THUMPD1-202ENST00000396083 EXOC6Q8TAG9 804 aa12.53□□□□□ -0.4
THUMPD1-202ENST00000396083 NEUROD6Q96NK8 337 aa12.53□□□□□ -0.4
THUMPD1-202ENST00000396083 CEP126Q9P2H0 1117 aa12.53□□□□□ -0.4
THUMPD1-202ENST00000396083 FRAT2O75474 233 aaPredicted RBP12.52□□□□□ -0.4
THUMPD1-202ENST00000396083 BCAMP50895 628 aa12.52□□□□□ -0.4
THUMPD1-202ENST00000396083 G3BP1Q13283 466 aaKnown RBP eCLIP12.52□□□□□ -0.4
THUMPD1-202ENST00000396083 GRIPAP1Q4V328 841 aa12.52□□□□□ -0.4
THUMPD1-202ENST00000396083 LEMD3Q9Y2U8 911 aa12.52□□□□□ -0.4
THUMPD1-202ENST00000396083 MROH5Q6ZUA9 1318 aa12.52□□□□□ -0.4
THUMPD1-202ENST00000396083 LTBP1Q14766 1721 aa12.52□□□□□ -0.41
THUMPD1-202ENST00000396083 POTEIP0CG38 1075 aa12.52□□□□□ -0.41
THUMPD1-202ENST00000396083 POTEJP0CG39 1038 aa12.52□□□□□ -0.41
THUMPD1-202ENST00000396083 MTX1Q13505 466 aa12.52□□□□□ -0.41
THUMPD1-202ENST00000396083 EAPPQ56P03 285 aaPredicted RBP12.52□□□□□ -0.41
THUMPD1-202ENST00000396083 COPRSQ9NQ92 184 aa12.52□□□□□ -0.41
THUMPD1-202ENST00000396083 GTF2IP78347 998 aa12.51□□□□□ -0.41
THUMPD1-202ENST00000396083 RBM26Q5T8P6 1007 aaKnown RBP12.51□□□□□ -0.41
THUMPD1-202ENST00000396083 CIAPIN1Q6FI81 312 aa12.51□□□□□ -0.41
THUMPD1-202ENST00000396083 VGLL2Q8N8G2 317 aa12.51□□□□□ -0.41
THUMPD1-202ENST00000396083 IL1RAPL2Q9NP60 686 aa12.51□□□□□ -0.41
THUMPD1-202ENST00000396083 KDM2BQ8NHM5 1336 aa12.51□□□□□ -0.41
THUMPD1-202ENST00000396083 F8W031 263 aaPredicted RBP12.51□□□□□ -0.41
THUMPD1-202ENST00000396083 ADORA1P30542 326 aa12.51□□□□□ -0.41
THUMPD1-202ENST00000396083 EPS15P42566 896 aa12.51□□□□□ -0.41
THUMPD1-202ENST00000396083 CHAF1AQ13111 956 aaPredicted RBP12.51□□□□□ -0.41
THUMPD1-202ENST00000396083 SSH3Q8TE77 659 aa12.51□□□□□ -0.41
THUMPD1-202ENST00000396083 PCDHB15Q9Y5E8 787 aa12.51□□□□□ -0.41
THUMPD1-202ENST00000396083 SASH1O94885 1247 aa12.5□□□□□ -0.41
THUMPD1-202ENST00000396083 IL15P40933 162 aaPredicted RBP12.5□□□□□ -0.41
THUMPD1-202ENST00000396083 ATP2B3Q16720 1220 aa12.5□□□□□ -0.41
THUMPD1-202ENST00000396083 GMPSP49915 693 aaPredicted RBP12.5□□□□□ -0.41
THUMPD1-202ENST00000396083 FAM84BQ96KN1 310 aaPredicted RBP12.5□□□□□ -0.41
THUMPD1-202ENST00000396083 CD209Q9NNX6 404 aa12.5□□□□□ -0.41
THUMPD1-202ENST00000396083 SCAF8Q9UPN6 1271 aaKnown RBP12.5□□□□□ -0.41
THUMPD1-202ENST00000396083 MED23Q9ULK4 1368 aa12.49□□□□□ -0.41
THUMPD1-202ENST00000396083 POTECB2RU33 542 aa12.49□□□□□ -0.41
THUMPD1-202ENST00000396083 POLA2Q14181 598 aa12.49□□□□□ -0.41
THUMPD1-202ENST00000396083 PUM3Q15397 648 aaKnown RBP12.49□□□□□ -0.41
THUMPD1-202ENST00000396083 TTLL5Q6EMB2 1281 aa12.49□□□□□ -0.41
THUMPD1-202ENST00000396083 A0A1B0GUL7 405 aa12.49□□□□□ -0.41
THUMPD1-202ENST00000396083 SCNN1DP51172 638 aa12.49□□□□□ -0.41
THUMPD1-202ENST00000396083 UBE4AQ14139 1066 aa12.49□□□□□ -0.41
THUMPD1-202ENST00000396083 KIAA0825Q8IV33 1275 aa12.49□□□□□ -0.41
THUMPD1-202ENST00000396083 GPC2Q8N158 579 aa12.49□□□□□ -0.41
THUMPD1-202ENST00000396083 A0A1B0GUL6 1792 aa12.49□□□□□ -0.41
THUMPD1-202ENST00000396083 EGFRP00533 1210 aa12.48□□□□□ -0.41
THUMPD1-202ENST00000396083 IFIT1P09914 478 aaKnown RBP12.48□□□□□ -0.41
THUMPD1-202ENST00000396083 HIBADHP31937 336 aaKnown RBP12.48□□□□□ -0.41
THUMPD1-202ENST00000396083 SAMD7Q7Z3H4 446 aa12.48□□□□□ -0.41
THUMPD1-202ENST00000396083 ZNF804AQ7Z570 1209 aa12.48□□□□□ -0.41
THUMPD1-202ENST00000396083 CCDC8Q9H0W5 538 aaPredicted RBP12.48□□□□□ -0.41
THUMPD1-202ENST00000396083 VEGFAP15692 232 aaPredicted RBP12.48□□□□□ -0.41
THUMPD1-202ENST00000396083 CAVIN4Q5BKX8 364 aa12.48□□□□□ -0.41
THUMPD1-202ENST00000396083 CLEC11AQ9Y240 323 aa12.48□□□□□ -0.41
THUMPD1-202ENST00000396083 KIF3CO14782 793 aa12.47□□□□□ -0.41
THUMPD1-202ENST00000396083 CIAO1O76071 339 aa12.47□□□□□ -0.41
THUMPD1-202ENST00000396083 SLC5A1P13866 664 aa12.47□□□□□ -0.41
THUMPD1-202ENST00000396083 PHKA1P46020 1223 aa12.47□□□□□ -0.41
THUMPD1-202ENST00000396083 GORABQ5T7V8 394 aa12.47□□□□□ -0.41
THUMPD1-202ENST00000396083 PODNQ7Z5L7 613 aa12.47□□□□□ -0.41
THUMPD1-202ENST00000396083 C16orf71Q8IYS4 520 aaPredicted RBP12.47□□□□□ -0.41
THUMPD1-202ENST00000396083 COA1Q9GZY4 146 aa12.47□□□□□ -0.41
THUMPD1-202ENST00000396083 USP17L3A6NCW0 530 aa12.47□□□□□ -0.41
THUMPD1-202ENST00000396083 USP17L4A6NCW7 530 aa12.47□□□□□ -0.41
THUMPD1-202ENST00000396083 SMARCA5O60264 1052 aaPredicted RBP12.47□□□□□ -0.41
THUMPD1-202ENST00000396083 TBC1D10BQ4KMP7 808 aaPredicted RBP12.47□□□□□ -0.41
THUMPD1-202ENST00000396083 PI16Q6UXB8 463 aa12.47□□□□□ -0.41
THUMPD1-202ENST00000396083 USP17L1Q7RTZ2 530 aa12.47□□□□□ -0.41
THUMPD1-202ENST00000396083 RPAP2Q8IXW5 612 aaPredicted RBP12.47□□□□□ -0.41
THUMPD1-202ENST00000396083 MICALL2Q8IY33 904 aa12.47□□□□□ -0.41
THUMPD1-202ENST00000396083 LPIN2Q92539 896 aa12.47□□□□□ -0.41
THUMPD1-202ENST00000396083 TLR7Q9NYK1 1049 aaKnown RBP12.47□□□□□ -0.41
THUMPD1-202ENST00000396083 HMMRO75330 724 aa12.46□□□□□ -0.41
THUMPD1-202ENST00000396083 LMOD1P29536 600 aaPredicted RBP12.46□□□□□ -0.41
THUMPD1-202ENST00000396083 TNIP1Q15025 636 aa12.46□□□□□ -0.41
THUMPD1-202ENST00000396083 CNOT7Q9UIV1 285 aaKnown RBP12.46□□□□□ -0.41
THUMPD1-202ENST00000396083 NDUFB9Q9Y6M9 179 aa12.46□□□□□ -0.41
THUMPD1-202ENST00000396083 IRS2Q9Y4H2 1338 aa12.46□□□□□ -0.41
THUMPD1-202ENST00000396083 FGFR2P21802 821 aa12.46□□□□□ -0.42
THUMPD1-202ENST00000396083 XAGE2Q96GT9 111 aa12.46□□□□□ -0.42
THUMPD1-202ENST00000396083 VPS33BQ9H267 617 aa12.46□□□□□ -0.42
THUMPD1-202ENST00000396083 CHMP4BQ9H444 224 aaKnown RBP12.46□□□□□ -0.42
THUMPD1-202ENST00000396083 ZC3H4Q9UPT8 1303 aaKnown RBP12.46□□□□□ -0.42
THUMPD1-202ENST00000396083 EPHX2P34913 555 aa12.45□□□□□ -0.42
THUMPD1-202ENST00000396083 DBNDD2Q9BQY9 259 aa12.45□□□□□ -0.42
THUMPD1-202ENST00000396083 HACL1Q9UJ83 578 aa12.45□□□□□ -0.42
THUMPD1-202ENST00000396083 MFSD14BQ5SR56 506 aa12.45□□□□□ -0.42
THUMPD1-202ENST00000396083 DLK2Q6UY11 383 aa12.45□□□□□ -0.42
THUMPD1-202ENST00000396083 CERS5Q8N5B7 392 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms