RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 TRIM6-TRIM34B2RNG4 842 aa18.33■□□□□ 0.52
SCAF11-204ENST00000395454 IFIT2P09913 472 aaKnown RBP18.33■□□□□ 0.52
SCAF11-204ENST00000395454 RABEP1Q15276 862 aa18.33■□□□□ 0.52
SCAF11-204ENST00000395454 AACSQ86V21 672 aa18.33■□□□□ 0.52
SCAF11-204ENST00000395454 CNTROBQ8N137 903 aa18.33■□□□□ 0.52
SCAF11-204ENST00000395454 HELBQ8NG08 1087 aaPredicted RBP18.33■□□□□ 0.52
SCAF11-204ENST00000395454 ANKIB1Q9P2G1 1089 aa18.33■□□□□ 0.52
SCAF11-204ENST00000395454 TAF5LO75529 589 aa18.32■□□□□ 0.52
SCAF11-204ENST00000395454 HSCBQ8IWL3 235 aa18.32■□□□□ 0.52
SCAF11-204ENST00000395454 SP8Q8IXZ3 490 aa18.32■□□□□ 0.52
SCAF11-204ENST00000395454 NSFL1CQ9UNZ2 370 aaKnown RBP18.32■□□□□ 0.52
SCAF11-204ENST00000395454 RILPL2Q969X0 211 aa18.31■□□□□ 0.52
SCAF11-204ENST00000395454 CEP126Q9P2H0 1117 aa18.31■□□□□ 0.52
SCAF11-204ENST00000395454 TFCP2Q12800 502 aa18.31■□□□□ 0.52
SCAF11-204ENST00000395454 C7orf43Q8WVR3 580 aa18.3■□□□□ 0.52
SCAF11-204ENST00000395454 LRRC37AA6NMS7 1700 aa18.3■□□□□ 0.52
SCAF11-204ENST00000395454 PDE8BO95263 885 aa18.29■□□□□ 0.52
SCAF11-204ENST00000395454 VGLL2Q8N8G2 317 aa18.29■□□□□ 0.52
SCAF11-204ENST00000395454 ANKRD2Q9GZV1 360 aa18.29■□□□□ 0.52
SCAF11-204ENST00000395454 GPR108Q9NPR9 543 aa18.29■□□□□ 0.52
SCAF11-204ENST00000395454 DDIT3P35638 169 aa18.29■□□□□ 0.52
SCAF11-204ENST00000395454 ANAPC15P60006 121 aa18.29■□□□□ 0.52
SCAF11-204ENST00000395454 GPSM2P81274 684 aa18.29■□□□□ 0.52
SCAF11-204ENST00000395454 XDHP47989 1333 aa18.29■□□□□ 0.52
SCAF11-204ENST00000395454 A0A1B0GUL6 1792 aa18.28■□□□□ 0.52
SCAF11-204ENST00000395454 SNAP23O00161 211 aa18.28■□□□□ 0.52
SCAF11-204ENST00000395454 SGSM2O43147 1006 aa18.28■□□□□ 0.52
SCAF11-204ENST00000395454 KCNJ4P48050 445 aa18.28■□□□□ 0.52
SCAF11-204ENST00000395454 TNNI3KQ59H18 835 aa18.28■□□□□ 0.52
SCAF11-204ENST00000395454 DPP8Q6V1X1 898 aaPredicted RBP18.28■□□□□ 0.52
SCAF11-204ENST00000395454 IL27Q8NEV9 243 aa18.28■□□□□ 0.52
SCAF11-204ENST00000395454 EVI5LQ96CN4 794 aa18.28■□□□□ 0.52
SCAF11-204ENST00000395454 FPGT-TNNI3KV9GXZ4 949 aa18.28■□□□□ 0.52
SCAF11-204ENST00000395454 CCDC93Q567U6 631 aa18.27■□□□□ 0.52
SCAF11-204ENST00000395454 CC2D2BQ6DHV5 1058 aa18.27■□□□□ 0.52
SCAF11-204ENST00000395454 MPNDQ8N594 471 aa18.27■□□□□ 0.52
SCAF11-204ENST00000395454 WTIPA6NIX2 430 aaPredicted RBP18.27■□□□□ 0.51
SCAF11-204ENST00000395454 PUM3Q15397 648 aaKnown RBP18.27■□□□□ 0.51
SCAF11-204ENST00000395454 SOGA3Q5TF21 947 aa18.27■□□□□ 0.51
SCAF11-204ENST00000395454 SNRKQ9NRH2 765 aa18.27■□□□□ 0.51
SCAF11-204ENST00000395454 TLR7Q9NYK1 1049 aaKnown RBP18.27■□□□□ 0.51
SCAF11-204ENST00000395454 GGA1Q9UJY5 639 aa18.27■□□□□ 0.51
SCAF11-204ENST00000395454 RFX7Q2KHR2 1363 aa18.27■□□□□ 0.51
SCAF11-204ENST00000395454 UFL1O94874 794 aa18.26■□□□□ 0.51
SCAF11-204ENST00000395454 CD2BP2O95400 341 aaKnown RBP18.26■□□□□ 0.51
SCAF11-204ENST00000395454 IL25Q9H293 177 aa18.26■□□□□ 0.51
SCAF11-204ENST00000395454 PODXL2Q9NZ53 605 aa18.26■□□□□ 0.51
SCAF11-204ENST00000395454 DBNLQ9UJU6 430 aaKnown RBP18.26■□□□□ 0.51
SCAF11-204ENST00000395454 AKAP2Q9Y2D5 859 aa18.26■□□□□ 0.51
SCAF11-204ENST00000395454 ARFGEF1Q9Y6D6 1849 aa18.26■□□□□ 0.51
SCAF11-204ENST00000395454 C6orf229H3BNL8 230 aa18.25■□□□□ 0.51
SCAF11-204ENST00000395454 K7ELQ4 463 aaPredicted RBP18.25■□□□□ 0.51
SCAF11-204ENST00000395454 ATP5JP18859 108 aa18.25■□□□□ 0.51
SCAF11-204ENST00000395454 TIMM10P62072 90 aa18.25■□□□□ 0.51
SCAF11-204ENST00000395454 RTKN2Q8IZC4 609 aa18.25■□□□□ 0.51
SCAF11-204ENST00000395454 POLLQ9UGP5 575 aa18.25■□□□□ 0.51
SCAF11-204ENST00000395454 ZNF804BA4D1E1 1349 aa18.25■□□□□ 0.51
SCAF11-204ENST00000395454 A0A1B0GUL7 405 aa18.25■□□□□ 0.51
SCAF11-204ENST00000395454 ATP2B3Q16720 1220 aa18.25■□□□□ 0.51
SCAF11-204ENST00000395454 TBC1D16Q8TBP0 767 aa18.25■□□□□ 0.51
SCAF11-204ENST00000395454 NEUROD6Q96NK8 337 aa18.25■□□□□ 0.51
SCAF11-204ENST00000395454 CCDC8Q9H0W5 538 aaPredicted RBP18.25■□□□□ 0.51
SCAF11-204ENST00000395454 LEMD3Q9Y2U8 911 aa18.25■□□□□ 0.51
SCAF11-204ENST00000395454 RAD50Q92878 1312 aa18.25■□□□□ 0.51
SCAF11-204ENST00000395454 ZNF609O15014 1411 aa18.25■□□□□ 0.51
SCAF11-204ENST00000395454 ATP2B4P23634 1241 aa18.24■□□□□ 0.51
SCAF11-204ENST00000395454 UBE4AQ14139 1066 aa18.24■□□□□ 0.51
SCAF11-204ENST00000395454 LTBP1Q14766 1721 aa18.24■□□□□ 0.51
SCAF11-204ENST00000395454 TICAM2Q86XR7 235 aa18.24■□□□□ 0.51
SCAF11-204ENST00000395454 LPIN2Q92539 896 aa18.24■□□□□ 0.51
SCAF11-204ENST00000395454 HIP1O00291 1037 aa18.23■□□□□ 0.51
SCAF11-204ENST00000395454 GRIPAP1Q4V328 841 aa18.23■□□□□ 0.51
SCAF11-204ENST00000395454 GPR101Q96P66 508 aaPredicted RBP18.23■□□□□ 0.51
SCAF11-204ENST00000395454 SNED1Q8TER0 1413 aa18.23■□□□□ 0.51
SCAF11-204ENST00000395454 MAP4K4O95819 1239 aaPredicted RBP18.23■□□□□ 0.51
SCAF11-204ENST00000395454 IFIT1P09914 478 aaKnown RBP18.23■□□□□ 0.51
SCAF11-204ENST00000395454 SLC5A1P13866 664 aa18.23■□□□□ 0.51
SCAF11-204ENST00000395454 YBX3P16989 372 aaKnown RBP eCLIP18.23■□□□□ 0.51
SCAF11-204ENST00000395454 FGFR2P21802 821 aa18.23■□□□□ 0.51
SCAF11-204ENST00000395454 MCCP23508 829 aa18.23■□□□□ 0.51
SCAF11-204ENST00000395454 NFKBIBQ15653 356 aa18.23■□□□□ 0.51
SCAF11-204ENST00000395454 GPR162Q16538 588 aa18.23■□□□□ 0.51
SCAF11-204ENST00000395454 ANO2Q9NQ90 1003 aa18.23■□□□□ 0.51
SCAF11-204ENST00000395454 DUOX1Q9NRD9 1551 aa18.22■□□□□ 0.51
SCAF11-204ENST00000395454 HSPA4P34932 840 aa18.22■□□□□ 0.51
SCAF11-204ENST00000395454 NBR1Q14596 966 aa18.22■□□□□ 0.51
SCAF11-204ENST00000395454 RUFY2Q8WXA3 655 aa18.22■□□□□ 0.51
SCAF11-204ENST00000395454 LSG1Q9H089 658 aaKnown RBP18.22■□□□□ 0.51
SCAF11-204ENST00000395454 SLKQ9H2G2 1235 aaPredicted RBP18.22■□□□□ 0.51
SCAF11-204ENST00000395454 KLRK1P26718 216 aa18.21■□□□□ 0.51
SCAF11-204ENST00000395454 TAOK3Q9H2K8 898 aa18.21■□□□□ 0.51
SCAF11-204ENST00000395454 CIZ1Q9ULV3 898 aaPredicted RBP18.21■□□□□ 0.51
SCAF11-204ENST00000395454 FER1L6Q2WGJ9 1857 aa18.21■□□□□ 0.51
SCAF11-204ENST00000395454 XAGE2Q96GT9 111 aa18.21■□□□□ 0.51
SCAF11-204ENST00000395454 PSMD1Q99460 953 aa18.21■□□□□ 0.51
SCAF11-204ENST00000395454 CHMP5Q9NZZ3 219 aa18.21■□□□□ 0.51
SCAF11-204ENST00000395454 RIMBP2O15034 1052 aa18.2■□□□□ 0.5
SCAF11-204ENST00000395454 ADORA1P30542 326 aa18.2■□□□□ 0.5
SCAF11-204ENST00000395454 FKBP4Q02790 459 aaKnown RBP eCLIP18.2■□□□□ 0.5
SCAF11-204ENST00000395454 WASHC4Q2M389 1173 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms