RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 HELBQ8NG08 1087 aaPredicted RBP23.4■■□□□ 1.34
LMNB1-202ENST00000395354 CEP126Q9P2H0 1117 aa23.4■■□□□ 1.34
LMNB1-202ENST00000395354 BRCA1P38398 1863 aaKnown RBP23.39■■□□□ 1.33
LMNB1-202ENST00000395354 SNX21Q969T3 373 aa23.39■■□□□ 1.33
LMNB1-202ENST00000395354 EVI5LQ96CN4 794 aa23.39■■□□□ 1.33
LMNB1-202ENST00000395354 KIF2CQ99661 725 aa23.39■■□□□ 1.33
LMNB1-202ENST00000395354 ANKRD2Q9GZV1 360 aa23.39■■□□□ 1.33
LMNB1-202ENST00000395354 CCDC8Q9H0W5 538 aaPredicted RBP23.39■■□□□ 1.33
LMNB1-202ENST00000395354 CC2D2BQ6DHV5 1058 aa23.38■■□□□ 1.33
LMNB1-202ENST00000395354 TBC1D2Q9BYX2 928 aa23.38■■□□□ 1.33
LMNB1-202ENST00000395354 ANKIB1Q9P2G1 1089 aa23.38■■□□□ 1.33
LMNB1-202ENST00000395354 NSFL1CQ9UNZ2 370 aaKnown RBP23.38■■□□□ 1.33
LMNB1-202ENST00000395354 AK9Q5TCS8 1911 aa23.37■■□□□ 1.33
LMNB1-202ENST00000395354 TAF5LO75529 589 aa23.37■■□□□ 1.33
LMNB1-202ENST00000395354 SLC4A3P48751 1232 aa23.37■■□□□ 1.33
LMNB1-202ENST00000395354 PDE8BO95263 885 aa23.36■■□□□ 1.33
LMNB1-202ENST00000395354 GPSM2P81274 684 aa23.36■■□□□ 1.33
LMNB1-202ENST00000395354 ATP5JP18859 108 aa23.35■■□□□ 1.33
LMNB1-202ENST00000395354 MPNDQ8N594 471 aa23.35■■□□□ 1.33
LMNB1-202ENST00000395354 VGLL2Q8N8G2 317 aa23.35■■□□□ 1.33
LMNB1-202ENST00000395354 SOGA3Q5TF21 947 aa23.35■■□□□ 1.33
LMNB1-202ENST00000395354 TLR7Q9NYK1 1049 aaKnown RBP23.35■■□□□ 1.33
LMNB1-202ENST00000395354 XDHP47989 1333 aa23.35■■□□□ 1.33
LMNB1-202ENST00000395354 HIP1O00291 1037 aa23.34■■□□□ 1.33
LMNB1-202ENST00000395354 MAP4K4O95819 1239 aaPredicted RBP23.34■■□□□ 1.33
LMNB1-202ENST00000395354 PODXL2Q9NZ53 605 aa23.34■■□□□ 1.33
LMNB1-202ENST00000395354 DBNLQ9UJU6 430 aaKnown RBP23.34■■□□□ 1.33
LMNB1-202ENST00000395354 RABEP1Q15276 862 aa23.33■■□□□ 1.33
LMNB1-202ENST00000395354 GRIPAP1Q4V328 841 aa23.33■■□□□ 1.33
LMNB1-202ENST00000395354 CCDC93Q567U6 631 aa23.33■■□□□ 1.33
LMNB1-202ENST00000395354 DPP8Q6V1X1 898 aaPredicted RBP23.33■■□□□ 1.33
LMNB1-202ENST00000395354 HSCBQ8IWL3 235 aa23.33■■□□□ 1.33
LMNB1-202ENST00000395354 RTKN2Q8IZC4 609 aa23.33■■□□□ 1.33
LMNB1-202ENST00000395354 RUFY2Q8WXA3 655 aa23.33■■□□□ 1.33
LMNB1-202ENST00000395354 ANP32EQ9BTT0 268 aa23.33■■□□□ 1.33
LMNB1-202ENST00000395354 LRRC37AA6NMS7 1700 aa23.32■■□□□ 1.32
LMNB1-202ENST00000395354 WTIPA6NIX2 430 aaPredicted RBP23.32■■□□□ 1.32
LMNB1-202ENST00000395354 SNAP23O00161 211 aa23.32■■□□□ 1.32
LMNB1-202ENST00000395354 AKAP2Q9Y2D5 859 aa23.32■■□□□ 1.32
LMNB1-202ENST00000395354 LEMD3Q9Y2U8 911 aa23.32■■□□□ 1.32
LMNB1-202ENST00000395354 SGSM2O43147 1006 aa23.31■■□□□ 1.32
LMNB1-202ENST00000395354 MCCP23508 829 aa23.31■■□□□ 1.32
LMNB1-202ENST00000395354 KCNJ4P48050 445 aa23.31■■□□□ 1.32
LMNB1-202ENST00000395354 GGA1Q9UJY5 639 aa23.31■■□□□ 1.32
LMNB1-202ENST00000395354 ZNF609O15014 1411 aa23.31■■□□□ 1.32
LMNB1-202ENST00000395354 ZNF804BA4D1E1 1349 aa23.31■■□□□ 1.32
LMNB1-202ENST00000395354 ATP2B4P23634 1241 aa23.31■■□□□ 1.32
LMNB1-202ENST00000395354 PUM3Q15397 648 aaKnown RBP23.31■■□□□ 1.32
LMNB1-202ENST00000395354 TICAM2Q86XR7 235 aa23.31■■□□□ 1.32
LMNB1-202ENST00000395354 TBC1D16Q8TBP0 767 aa23.31■■□□□ 1.32
LMNB1-202ENST00000395354 POLLQ9UGP5 575 aa23.31■■□□□ 1.32
LMNB1-202ENST00000395354 C6orf229H3BNL8 230 aa23.3■■□□□ 1.32
LMNB1-202ENST00000395354 TIMM10P62072 90 aa23.3■■□□□ 1.32
LMNB1-202ENST00000395354 UBE4AQ14139 1066 aa23.3■■□□□ 1.32
LMNB1-202ENST00000395354 ATP2B3Q16720 1220 aa23.3■■□□□ 1.32
LMNB1-202ENST00000395354 IL27Q8NEV9 243 aa23.3■■□□□ 1.32
LMNB1-202ENST00000395354 IL17RAQ96F46 866 aa23.3■■□□□ 1.32
LMNB1-202ENST00000395354 DIAPH3Q9NSV4 1193 aa23.3■■□□□ 1.32
LMNB1-202ENST00000395354 UFL1O94874 794 aa23.29■■□□□ 1.32
LMNB1-202ENST00000395354 FGFR2P21802 821 aa23.29■■□□□ 1.32
LMNB1-202ENST00000395354 ANAPC15P60006 121 aa23.29■■□□□ 1.32
LMNB1-202ENST00000395354 LPIN2Q92539 896 aa23.29■■□□□ 1.32
LMNB1-202ENST00000395354 NEUROD6Q96NK8 337 aa23.29■■□□□ 1.32
LMNB1-202ENST00000395354 DBNDD2Q9BQY9 259 aa23.29■■□□□ 1.32
LMNB1-202ENST00000395354 BOLA2Q9H3K6 86 aa23.29■■□□□ 1.32
LMNB1-202ENST00000395354 RFX7Q2KHR2 1363 aa23.29■■□□□ 1.32
LMNB1-202ENST00000395354 ARFGEF1Q9Y6D6 1849 aa23.28■■□□□ 1.32
LMNB1-202ENST00000395354 A0A1B0GUL7 405 aa23.28■■□□□ 1.32
LMNB1-202ENST00000395354 ANO2Q9NQ90 1003 aa23.28■■□□□ 1.32
LMNB1-202ENST00000395354 SNED1Q8TER0 1413 aa23.28■■□□□ 1.32
LMNB1-202ENST00000395354 YBX3P16989 372 aaKnown RBP eCLIP23.27■■□□□ 1.323e-9■□□□□ 10.7
LMNB1-202ENST00000395354 GPR162Q16538 588 aa23.27■■□□□ 1.32
LMNB1-202ENST00000395354 HAUS7Q99871 368 aa23.27■■□□□ 1.32
LMNB1-202ENST00000395354 RTFDC1Q9BY42 306 aaPredicted RBP23.27■■□□□ 1.32
LMNB1-202ENST00000395354 A0A1B0GUL6 1792 aa23.27■■□□□ 1.32
LMNB1-202ENST00000395354 IFIT1P09914 478 aaKnown RBP23.27■■□□□ 1.32
LMNB1-202ENST00000395354 SLC5A1P13866 664 aa23.27■■□□□ 1.32
LMNB1-202ENST00000395354 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.27■■□□□ 1.32
LMNB1-202ENST00000395354 PSMD1Q99460 953 aa23.27■■□□□ 1.32
LMNB1-202ENST00000395354 GOLGB1Q14789 3259 aaKnown RBP23.26■■□□□ 1.31
LMNB1-202ENST00000395354 RAD50Q92878 1312 aa23.26■■□□□ 1.31
LMNB1-202ENST00000395354 ARHGAP27Q6ZUM4 889 aa23.26■■□□□ 1.31
LMNB1-202ENST00000395354 SUPT20HQ8NEM7 779 aa23.26■■□□□ 1.31
LMNB1-202ENST00000395354 GPR101Q96P66 508 aaPredicted RBP23.26■■□□□ 1.31
LMNB1-202ENST00000395354 SNRKQ9NRH2 765 aa23.26■■□□□ 1.31
LMNB1-202ENST00000395354 LTBP1Q14766 1721 aa23.25■■□□□ 1.31
LMNB1-202ENST00000395354 FKBP4Q02790 459 aaKnown RBP eCLIP23.25■■□□□ 1.31
LMNB1-202ENST00000395354 KIAA1211Q6ZU35 1233 aa23.25■■□□□ 1.31
LMNB1-202ENST00000395354 WASHC4Q2M389 1173 aa23.24■■□□□ 1.31
LMNB1-202ENST00000395354 CWC27Q6UX04 472 aaKnown RBP23.24■■□□□ 1.31
LMNB1-202ENST00000395354 XAGE2Q96GT9 111 aa23.24■■□□□ 1.31
LMNB1-202ENST00000395354 EYA3Q99504 573 aa23.24■■□□□ 1.31
LMNB1-202ENST00000395354 ZC3H12CQ9C0D7 883 aaKnown RBP23.24■■□□□ 1.31
LMNB1-202ENST00000395354 TAOK3Q9H2K8 898 aa23.24■■□□□ 1.31
LMNB1-202ENST00000395354 NFKBIEO00221 500 aa23.23■■□□□ 1.31
LMNB1-202ENST00000395354 RIMBP2O15034 1052 aa23.23■■□□□ 1.31
LMNB1-202ENST00000395354 KLRK1P26718 216 aa23.23■■□□□ 1.31
LMNB1-202ENST00000395354 TXNRD3Q86VQ6 643 aa23.23■■□□□ 1.31
LMNB1-202ENST00000395354 FSD1Q9BTV5 496 aa23.23■■□□□ 1.31
LMNB1-202ENST00000395354 DUOX1Q9NRD9 1551 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms