RNA–Protein interactions for RNA: ENST00000393559.1

LAMB1-202, Transcript of laminin subunit beta 1, humanhuman

TSL 2

Gene LAMB1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-202ENST00000393559 VPS33BQ9H267 617 aa17.01■□□□□ 0.31
LAMB1-202ENST00000393559 ADAMTSL1Q8N6G6 1762 aa17.01■□□□□ 0.31
LAMB1-202ENST00000393559 SURF6O75683 361 aaKnown RBP17■□□□□ 0.31
LAMB1-202ENST00000393559 RAD17O75943 681 aa17■□□□□ 0.31
LAMB1-202ENST00000393559 CTSWP56202 376 aa17■□□□□ 0.31
LAMB1-202ENST00000393559 NUCB1Q02818 461 aa17■□□□□ 0.31
LAMB1-202ENST00000393559 DDX46Q7L014 1031 aaKnown RBP17■□□□□ 0.31
LAMB1-202ENST00000393559 SP8Q8IXZ3 490 aa17■□□□□ 0.31
LAMB1-202ENST00000393559 PA2G4Q9UQ80 394 aaKnown RBP17■□□□□ 0.31
LAMB1-202ENST00000393559 APBB1O00213 710 aa16.99■□□□□ 0.31
LAMB1-202ENST00000393559 CELF2O95319 508 aaKnown RBP16.99■□□□□ 0.31
LAMB1-202ENST00000393559 HSP90B1P14625 803 aaKnown RBP16.99■□□□□ 0.31
LAMB1-202ENST00000393559 RFX5P48382 616 aaPredicted RBP16.99■□□□□ 0.31
LAMB1-202ENST00000393559 ANKRD45Q5TZF3 282 aa16.99■□□□□ 0.31
LAMB1-202ENST00000393559 ABHD8Q96I13 439 aa16.99■□□□□ 0.31
LAMB1-202ENST00000393559 ZNF408Q9H9D4 720 aa16.99■□□□□ 0.31
LAMB1-202ENST00000393559 LTBP1Q14766 1721 aa16.99■□□□□ 0.31
LAMB1-202ENST00000393559 AOC2O75106 756 aa16.98■□□□□ 0.31
LAMB1-202ENST00000393559 CSF1RP07333 972 aa16.98■□□□□ 0.31
LAMB1-202ENST00000393559 TNIP1Q15025 636 aa16.98■□□□□ 0.31
LAMB1-202ENST00000393559 FAM161AQ3B820 660 aa16.98■□□□□ 0.31
LAMB1-202ENST00000393559 CIAPIN1Q6FI81 312 aa16.98■□□□□ 0.31
LAMB1-202ENST00000393559 CHD1LQ86WJ1 897 aa16.98■□□□□ 0.31
LAMB1-202ENST00000393559 TTLL11Q8NHH1 800 aa16.98■□□□□ 0.31
LAMB1-202ENST00000393559 CCDC85AQ96PX6 553 aaPredicted RBP16.98■□□□□ 0.31
LAMB1-202ENST00000393559 RTFDC1Q9BY42 306 aaPredicted RBP16.98■□□□□ 0.31
LAMB1-202ENST00000393559 GLIS2Q9BZE0 524 aaPredicted RBP16.98■□□□□ 0.31
LAMB1-202ENST00000393559 TSKSQ9UJT2 592 aa16.98■□□□□ 0.31
LAMB1-202ENST00000393559 NOP58Q9Y2X3 529 aaKnown RBP16.98■□□□□ 0.31
LAMB1-202ENST00000393559 TLL2Q9Y6L7 1015 aa16.98■□□□□ 0.31
LAMB1-202ENST00000393559 LAMB2P55268 1798 aa16.97■□□□□ 0.31
LAMB1-202ENST00000393559 OS9Q13438 667 aaPredicted RBP16.97■□□□□ 0.31
LAMB1-202ENST00000393559 HSP90AB4PQ58FF6 505 aa16.97■□□□□ 0.31
LAMB1-202ENST00000393559 KLHDC4Q8TBB5 520 aa16.97■□□□□ 0.31
LAMB1-202ENST00000393559 LNPKQ9C0E8 428 aa16.97■□□□□ 0.31
LAMB1-202ENST00000393559 ZBTB47Q9UFB7 747 aaPredicted RBP16.97■□□□□ 0.31
LAMB1-202ENST00000393559 DDX60Q8IY21 1712 aaKnown RBP16.96■□□□□ 0.31
LAMB1-202ENST00000393559 RAB11FIP3O75154 756 aa16.96■□□□□ 0.31
LAMB1-202ENST00000393559 RGS3P49796 1198 aa16.96■□□□□ 0.31
LAMB1-202ENST00000393559 PTPN12Q05209 780 aaKnown RBP16.96■□□□□ 0.31
LAMB1-202ENST00000393559 KIAA2012Q0VF49 1180 aa16.96■□□□□ 0.31
LAMB1-202ENST00000393559 GRAPQ13588 217 aa16.96■□□□□ 0.31
LAMB1-202ENST00000393559 GRAPLQ8TC17 118 aaPredicted RBP16.96■□□□□ 0.31
LAMB1-202ENST00000393559 SIL1Q9H173 461 aa16.96■□□□□ 0.31
LAMB1-202ENST00000393559 GREM2Q9H772 168 aa16.96■□□□□ 0.31
LAMB1-202ENST00000393559 COPRSQ9NQ92 184 aa16.96■□□□□ 0.31
LAMB1-202ENST00000393559 MYH3P11055 1940 aa16.96■□□□□ 0.3
LAMB1-202ENST00000393559 CCDC85CA6NKD9 419 aa16.95■□□□□ 0.3
LAMB1-202ENST00000393559 SMARCA5O60264 1052 aaPredicted RBP16.95■□□□□ 0.3
LAMB1-202ENST00000393559 PDE4AP27815 886 aa16.95■□□□□ 0.3
LAMB1-202ENST00000393559 G3BP1Q13283 466 aaKnown RBP eCLIP16.95■□□□□ 0.3
LAMB1-202ENST00000393559 CCDC57Q2TAC2 916 aa16.95■□□□□ 0.3
LAMB1-202ENST00000393559 SAPCD2Q86UD0 394 aa16.95■□□□□ 0.3
LAMB1-202ENST00000393559 LRRCC1Q9C099 1032 aa16.95■□□□□ 0.3
LAMB1-202ENST00000393559 CNOT7Q9UIV1 285 aaKnown RBP16.95■□□□□ 0.3
LAMB1-202ENST00000393559 SHTN1A0MZ66 631 aa16.94■□□□□ 0.3
LAMB1-202ENST00000393559 H7C1D1 291 aa16.94■□□□□ 0.3
LAMB1-202ENST00000393559 ITGA6P23229 1130 aa16.94■□□□□ 0.3
LAMB1-202ENST00000393559 MAP2K2P36507 400 aa16.94■□□□□ 0.3
LAMB1-202ENST00000393559 HIRAP54198 1017 aaPredicted RBP16.94■□□□□ 0.3
LAMB1-202ENST00000393559 IFIT5Q13325 482 aaKnown RBP16.94■□□□□ 0.3
LAMB1-202ENST00000393559 CCDC152Q4G0S7 254 aa16.94■□□□□ 0.3
LAMB1-202ENST00000393559 ERC1Q8IUD2 1116 aa16.94■□□□□ 0.3
LAMB1-202ENST00000393559 TRPM4Q8TD43 1214 aa16.94■□□□□ 0.3
LAMB1-202ENST00000393559 ZNF594Q96JF6 807 aaPredicted RBP16.94■□□□□ 0.3
LAMB1-202ENST00000393559 ANKRD18BA2A2Z9 1011 aa16.93■□□□□ 0.3
LAMB1-202ENST00000393559 RIMBP2O15034 1052 aa16.93■□□□□ 0.3
LAMB1-202ENST00000393559 TAF7LQ5H9L4 462 aa16.93■□□□□ 0.3
LAMB1-202ENST00000393559 RHPN1Q8TCX5 695 aa16.93■□□□□ 0.3
LAMB1-202ENST00000393559 KIF1BPQ96EK5 621 aa16.93■□□□□ 0.3
LAMB1-202ENST00000393559 BCL11AQ9H165 835 aa16.93■□□□□ 0.3
LAMB1-202ENST00000393559 NSFL1CQ9UNZ2 370 aaKnown RBP16.93■□□□□ 0.3
LAMB1-202ENST00000393559 ZBTB12Q9Y330 459 aaPredicted RBP16.93■□□□□ 0.3
LAMB1-202ENST00000393559 YDJCA8MPS7 323 aa16.92■□□□□ 0.3
LAMB1-202ENST00000393559 SF3B3Q15393 1217 aaKnown RBP16.92■□□□□ 0.3
LAMB1-202ENST00000393559 WASHC4Q2M389 1173 aa16.92■□□□□ 0.3
LAMB1-202ENST00000393559 CDC37L1Q7L3B6 337 aa16.92■□□□□ 0.3
LAMB1-202ENST00000393559 USP48Q86UV5 1035 aa16.92■□□□□ 0.3
LAMB1-202ENST00000393559 MICALL2Q8IY33 904 aa16.92■□□□□ 0.3
LAMB1-202ENST00000393559 ZC3H15Q8WU90 426 aaKnown RBP16.92■□□□□ 0.3
LAMB1-202ENST00000393559 PGAP2Q9UHJ9 254 aa16.92■□□□□ 0.3
LAMB1-202ENST00000393559 RTL9Q8NET4 1388 aa16.91■□□□□ 0.3
LAMB1-202ENST00000393559 C6orf229H3BNL8 230 aa16.91■□□□□ 0.3
LAMB1-202ENST00000393559 DLK2Q6UY11 383 aa16.91■□□□□ 0.3
LAMB1-202ENST00000393559 DBNDD1Q9H9R9 158 aa16.91■□□□□ 0.3
LAMB1-202ENST00000393559 IL1RAPL2Q9NP60 686 aa16.91■□□□□ 0.3
LAMB1-202ENST00000393559 EYA2O00167 538 aa16.9■□□□□ 0.3
LAMB1-202ENST00000393559 SASH1O94885 1247 aa16.9■□□□□ 0.3
LAMB1-202ENST00000393559 TBC1D10BQ4KMP7 808 aaPredicted RBP16.9■□□□□ 0.3
LAMB1-202ENST00000393559 RBM26Q5T8P6 1007 aaKnown RBP16.9■□□□□ 0.3
LAMB1-202ENST00000393559 SAMD7Q7Z3H4 446 aa16.9■□□□□ 0.3
LAMB1-202ENST00000393559 TMC4Q7Z404 712 aa16.9■□□□□ 0.3
LAMB1-202ENST00000393559 CELF1Q92879 486 aaKnown RBP16.9■□□□□ 0.3
LAMB1-202ENST00000393559 PUS3Q9BZE2 481 aaKnown RBP16.9■□□□□ 0.3
LAMB1-202ENST00000393559 SEC31BQ9NQW1 1179 aa16.9■□□□□ 0.3
LAMB1-202ENST00000393559 PSMD14O00487 310 aa16.89■□□□□ 0.29
LAMB1-202ENST00000393559 CIAO1O76071 339 aa16.89■□□□□ 0.29
LAMB1-202ENST00000393559 IL15P40933 162 aaPredicted RBP16.89■□□□□ 0.29
LAMB1-202ENST00000393559 DOK7Q18PE1 504 aa16.89■□□□□ 0.29
LAMB1-202ENST00000393559 LRRC24Q50LG9 513 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms