RNA–Protein interactions for RNA: ENST00000390533.1

TRAJ4-201, Transcript of T cell receptor alpha joining 4, humanhuman

APPRIS P1 BASIC

Gene TRAJ4, Length 63 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ4-201ENST00000390533 FAM173BQ6P4H8 233 aa5.75□□□□□ -1.49
TRAJ4-201ENST00000390533 PLPPR3Q6T4P5 718 aa5.75□□□□□ -1.49
TRAJ4-201ENST00000390533 MCM10Q7L590 875 aa5.75□□□□□ -1.49
TRAJ4-201ENST00000390533 TMC6Q7Z403 805 aa5.75□□□□□ -1.49
TRAJ4-201ENST00000390533 CLASRPQ8N2M8 674 aaKnown RBP5.75□□□□□ -1.49
TRAJ4-201ENST00000390533 CEP112Q8N8E3 955 aa5.75□□□□□ -1.49
TRAJ4-201ENST00000390533 MRPS27Q92552 414 aaKnown RBP5.75□□□□□ -1.49
TRAJ4-201ENST00000390533 BRF1Q92994 677 aa5.75□□□□□ -1.49
TRAJ4-201ENST00000390533 ZFP91Q96JP5 570 aaPredicted RBP5.75□□□□□ -1.49
TRAJ4-201ENST00000390533 TRERF1Q96PN7 1200 aa5.75□□□□□ -1.49
TRAJ4-201ENST00000390533 EIF3CQ99613 913 aaKnown RBP5.75□□□□□ -1.49
TRAJ4-201ENST00000390533 CARD6Q9BX69 1037 aa5.75□□□□□ -1.49
TRAJ4-201ENST00000390533 ACBD3Q9H3P7 528 aa5.75□□□□□ -1.49
TRAJ4-201ENST00000390533 VIPAS39Q9H9C1 493 aa5.75□□□□□ -1.49
TRAJ4-201ENST00000390533 IL1RAPL2Q9NP60 686 aa5.75□□□□□ -1.49
TRAJ4-201ENST00000390533 RTEL1Q9NZ71 1219 aa5.75□□□□□ -1.49
TRAJ4-201ENST00000390533 STK26Q9P289 416 aa5.75□□□□□ -1.49
TRAJ4-201ENST00000390533 LCMT1Q9UIC8 334 aa5.75□□□□□ -1.49
TRAJ4-201ENST00000390533 CHMP3Q9Y3E7 222 aa5.75□□□□□ -1.49
TRAJ4-201ENST00000390533 MYO5BQ9ULV0 1848 aa5.75□□□□□ -1.49
TRAJ4-201ENST00000390533 CPS1P31327 1500 aa5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 CCDC196A0A1B0GTZ2 297 aa5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 NUTM2FA1L443 756 aa5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 VWA3AA6NCI4 1184 aa5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 H3BQF6 201 aa5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 NPHP1O15259 732 aa5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 SOX12O15370 315 aa5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 STX10O60499 249 aa5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 SEC31AO94979 1220 aaKnown RBP5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 HMGB1P09429 215 aaKnown RBP5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 USP8P40818 1118 aa5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 NUTM2GQ5VZR2 741 aa5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 PAXIP1Q6ZW49 1069 aaPredicted RBP5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 NME9Q86XW9 330 aa5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 VSTM4Q8IW00 320 aa5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 FBXL16Q8N461 479 aa5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 FSIP1Q8NA03 581 aa5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 CTCFLQ8NI51 663 aaPredicted RBP5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 KCNG4Q8TDN1 519 aa5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 KIFC2Q96AC6 838 aa5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 LARP6Q9BRS8 491 aaKnown RBP5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 AGXT2Q9BYV1 514 aa5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 GOLPH3LQ9H4A5 285 aa5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 ZCCHC17Q9NP64 241 aaKnown RBP5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 A1CFQ9NQ94 594 aaKnown RBP5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 RNF216Q9NWF9 866 aaPredicted RBP5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 DONSONQ9NYP3 566 aa5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 IFNKQ9P0W0 207 aa5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 L1RE1Q9UN81 338 aa5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 PPP2R2CQ9Y2T4 447 aa5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 CCDC61Q9Y6R9 512 aa5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 U3KPZ7 1027 aaPredicted RBP5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 OVOS2A0A0J9YW53 1432 aa5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 TECPR2O15040 1411 aa5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 NCAPD2Q15021 1401 aa5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 OVOS2Q6IE36 1432 aa5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 ATXN2Q99700 1313 aaKnown RBP5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 SALL1Q9NSC2 1324 aa5.74□□□□□ -1.49
TRAJ4-201ENST00000390533 A2ML1A8K2U0 1454 aa5.73□□□□□ -1.49
TRAJ4-201ENST00000390533 FAM237AA0A1B0GTK4 181 aa5.73□□□□□ -1.49
TRAJ4-201ENST00000390533 A6NNZ2 444 aa5.73□□□□□ -1.49
TRAJ4-201ENST00000390533 FANCGO15287 622 aa5.73□□□□□ -1.49
TRAJ4-201ENST00000390533 SLC3A2P08195 630 aaKnown RBP5.73□□□□□ -1.49
TRAJ4-201ENST00000390533 FBLN1P23142 703 aa5.73□□□□□ -1.49
TRAJ4-201ENST00000390533 AARSP49588 968 aaKnown RBP eCLIP5.73□□□□□ -1.49
TRAJ4-201ENST00000390533 TBX2Q13207 712 aaPredicted RBP5.73□□□□□ -1.49
TRAJ4-201ENST00000390533 TUBB8Q3ZCM7 444 aa5.73□□□□□ -1.49
TRAJ4-201ENST00000390533 TPRNQ4KMQ1 711 aa5.73□□□□□ -1.49
TRAJ4-201ENST00000390533 DNAJC21Q5F1R6 531 aaKnown RBP5.73□□□□□ -1.49
TRAJ4-201ENST00000390533 SRGAP1Q7Z6B7 1085 aa5.73□□□□□ -1.49
TRAJ4-201ENST00000390533 TADA2BQ86TJ2 420 aa5.73□□□□□ -1.49
TRAJ4-201ENST00000390533 PACS2Q86VP3 889 aa5.73□□□□□ -1.49
TRAJ4-201ENST00000390533 TMEM139Q8IV31 216 aa5.73□□□□□ -1.49
TRAJ4-201ENST00000390533 CEP120Q8N960 986 aa5.73□□□□□ -1.49
TRAJ4-201ENST00000390533 STAG1Q8WVM7 1258 aa5.73□□□□□ -1.49
TRAJ4-201ENST00000390533 DNAAF4Q8WXU2 420 aa5.73□□□□□ -1.49
TRAJ4-201ENST00000390533 ERCC4Q92889 916 aaPredicted RBP5.73□□□□□ -1.49
TRAJ4-201ENST00000390533 SECISBP2LQ93073 1101 aaKnown RBP5.73□□□□□ -1.49
TRAJ4-201ENST00000390533 USP28Q96RU2 1077 aa5.73□□□□□ -1.49
TRAJ4-201ENST00000390533 SDF4Q9BRK5 362 aa5.73□□□□□ -1.49
TRAJ4-201ENST00000390533 NAA15Q9BXJ9 866 aaKnown RBP5.73□□□□□ -1.49
TRAJ4-201ENST00000390533 POLR3EQ9NVU0 708 aa5.73□□□□□ -1.49
TRAJ4-201ENST00000390533 TUBE1Q9UJT0 475 aa5.73□□□□□ -1.49
TRAJ4-201ENST00000390533 CEP83Q9Y592 693 aa5.73□□□□□ -1.49
TRAJ4-201ENST00000390533 NEDD4P46934 1319 aa5.73□□□□□ -1.49
TRAJ4-201ENST00000390533 MED1Q15648 1581 aaPredicted RBP5.72□□□□□ -1.49
TRAJ4-201ENST00000390533 CEMIPQ8WUJ3 1361 aa5.72□□□□□ -1.49
TRAJ4-201ENST00000390533 CUTAO60888 179 aa5.72□□□□□ -1.49
TRAJ4-201ENST00000390533 TAF5LO75529 589 aa5.72□□□□□ -1.49
TRAJ4-201ENST00000390533 MAP4K4O95819 1239 aaPredicted RBP5.72□□□□□ -1.49
TRAJ4-201ENST00000390533 IFIT2P09913 472 aaKnown RBP5.72□□□□□ -1.49
TRAJ4-201ENST00000390533 CCDC172P0C7W6 258 aa5.72□□□□□ -1.49
TRAJ4-201ENST00000390533 TOP1P11387 765 aaKnown RBP5.72□□□□□ -1.49
TRAJ4-201ENST00000390533 CMA1P23946 247 aa5.72□□□□□ -1.49
TRAJ4-201ENST00000390533 MCM3P25205 808 aa5.72□□□□□ -1.49
TRAJ4-201ENST00000390533 ATP6V1AP38606 617 aa5.72□□□□□ -1.49
TRAJ4-201ENST00000390533 UBASH3AP57075 661 aa5.72□□□□□ -1.49
TRAJ4-201ENST00000390533 CHMP4BP1P59074 171 aa5.72□□□□□ -1.49
TRAJ4-201ENST00000390533 TRDNQ13061 729 aa5.72□□□□□ -1.49
TRAJ4-201ENST00000390533 NMIQ13287 307 aaPredicted RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms