RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 PRDM15P57071 1507 aaPredicted RBP7.21□□□□□ -1.26
ERCC4-202ENST00000389138 RXRBP28702 533 aa7.21□□□□□ -1.26
ERCC4-202ENST00000389138 FKBP4Q02790 459 aaKnown RBP eCLIP7.21□□□□□ -1.26
ERCC4-202ENST00000389138 ZNF594Q96JF6 807 aaPredicted RBP7.21□□□□□ -1.26
ERCC4-202ENST00000389138 FAM126AQ9BYI3 521 aaPredicted RBP7.21□□□□□ -1.26
ERCC4-202ENST00000389138 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.21□□□□□ -1.26
ERCC4-202ENST00000389138 SPATA31A6Q5VVP1 1343 aa7.21□□□□□ -1.26
ERCC4-202ENST00000389138 DHX29Q7Z478 1369 aaKnown RBP7.2□□□□□ -1.26
ERCC4-202ENST00000389138 RTEL1-TNFRSF6BF6WH68 1400 aa7.2□□□□□ -1.26
ERCC4-202ENST00000389138 DIP2AQ14689 1571 aa7.2□□□□□ -1.26
ERCC4-202ENST00000389138 ATF4P18848 351 aaPredicted RBP7.2□□□□□ -1.26
ERCC4-202ENST00000389138 CLDN10P78369 228 aa7.2□□□□□ -1.26
ERCC4-202ENST00000389138 LRRC41Q15345 812 aa7.2□□□□□ -1.26
ERCC4-202ENST00000389138 ZKSCAN2Q63HK3 967 aa7.2□□□□□ -1.26
ERCC4-202ENST00000389138 CREBRFQ8IUR6 639 aa7.2□□□□□ -1.26
ERCC4-202ENST00000389138 ENOX1Q8TC92 643 aaKnown RBP7.2□□□□□ -1.26
ERCC4-202ENST00000389138 ARNT2Q9HBZ2 717 aa7.2□□□□□ -1.26
ERCC4-202ENST00000389138 SRA1Q9HD15 236 aaKnown RBP7.2□□□□□ -1.26
ERCC4-202ENST00000389138 ENAMQ9NRM1 1142 aa7.2□□□□□ -1.26
ERCC4-202ENST00000389138 FANCLQ9NW38 375 aa7.2□□□□□ -1.26
ERCC4-202ENST00000389138 V9GY48 417 aaPredicted RBP7.2□□□□□ -1.26
ERCC4-202ENST00000389138 DHX57Q6P158 1386 aaKnown RBP7.2□□□□□ -1.26
ERCC4-202ENST00000389138 NKTRP30414 1462 aaKnown RBP7.2□□□□□ -1.26
ERCC4-202ENST00000389138 CAMSAP2Q08AD1 1489 aa7.2□□□□□ -1.26
ERCC4-202ENST00000389138 ABCC3O15438 1527 aa7.2□□□□□ -1.26
ERCC4-202ENST00000389138 PPP1R12AO14974 1030 aaPredicted RBP7.19□□□□□ -1.26
ERCC4-202ENST00000389138 NR6A1Q15406 480 aa7.19□□□□□ -1.26
ERCC4-202ENST00000389138 MEX3CQ5U5Q3 659 aaKnown RBP7.19□□□□□ -1.26
ERCC4-202ENST00000389138 JAMLQ86YT9 394 aa7.19□□□□□ -1.26
ERCC4-202ENST00000389138 GPKOWQ92917 476 aaPredicted RBP eCLIP7.19□□□□□ -1.26
ERCC4-202ENST00000389138 PIK3C2BO00750 1634 aa7.19□□□□□ -1.26
ERCC4-202ENST00000389138 NRDCO43847 1150 aa7.19□□□□□ -1.26
ERCC4-202ENST00000389138 PRPF40AO75400 957 aaKnown RBP7.19□□□□□ -1.26
ERCC4-202ENST00000389138 LGR5O75473 907 aa7.19□□□□□ -1.26
ERCC4-202ENST00000389138 CD2BP2O95400 341 aaKnown RBP7.19□□□□□ -1.26
ERCC4-202ENST00000389138 SLC19A1P41440 591 aa7.19□□□□□ -1.26
ERCC4-202ENST00000389138 CDKN1CP49918 316 aaPredicted RBP7.19□□□□□ -1.26
ERCC4-202ENST00000389138 RASSF7Q02833 373 aa7.19□□□□□ -1.26
ERCC4-202ENST00000389138 POU5F1BQ06416 359 aa7.19□□□□□ -1.26
ERCC4-202ENST00000389138 IPO4Q8TEX9 1081 aaKnown RBP7.19□□□□□ -1.26
ERCC4-202ENST00000389138 NAP1L4Q99733 375 aaKnown RBP7.19□□□□□ -1.26
ERCC4-202ENST00000389138 RBCK1Q9BYM8 510 aa7.19□□□□□ -1.26
ERCC4-202ENST00000389138 UNC93B1Q9H1C4 597 aa7.19□□□□□ -1.26
ERCC4-202ENST00000389138 CHD2O14647 1828 aaKnown RBP7.18□□□□□ -1.26
ERCC4-202ENST00000389138 MBD5Q9P267 1494 aa7.18□□□□□ -1.26
ERCC4-202ENST00000389138 CASKIN1Q8WXD9 1431 aa7.18□□□□□ -1.26
ERCC4-202ENST00000389138 WASHC2CQ9Y4E1 1318 aa7.18□□□□□ -1.26
ERCC4-202ENST00000389138 FAM221BA6H8Z2 402 aa7.18□□□□□ -1.26
ERCC4-202ENST00000389138 DKK1O94907 266 aa7.18□□□□□ -1.26
ERCC4-202ENST00000389138 HCLS1P14317 486 aaPredicted RBP7.18□□□□□ -1.26
ERCC4-202ENST00000389138 POLD1P28340 1107 aa7.18□□□□□ -1.26
ERCC4-202ENST00000389138 MAPK8P45983 427 aa7.18□□□□□ -1.26
ERCC4-202ENST00000389138 POU5F1Q01860 360 aaKnown RBP7.18□□□□□ -1.26
ERCC4-202ENST00000389138 DSC3Q14574 896 aa7.18□□□□□ -1.26
ERCC4-202ENST00000389138 NFE2Q16621 373 aaPredicted RBP7.18□□□□□ -1.26
ERCC4-202ENST00000389138 SVIPQ8NHG7 77 aa7.18□□□□□ -1.26
ERCC4-202ENST00000389138 SRPK1Q96SB4 655 aaKnown RBP7.18□□□□□ -1.26
ERCC4-202ENST00000389138 EIF2AK4Q9P2K8 1649 aaKnown RBP7.18□□□□□ -1.26
ERCC4-202ENST00000389138 FOSP01100 380 aaPredicted RBP7.18□□□□□ -1.26
ERCC4-202ENST00000389138 LDHCP07864 332 aa7.18□□□□□ -1.26
ERCC4-202ENST00000389138 VPS72Q15906 364 aa7.18□□□□□ -1.26
ERCC4-202ENST00000389138 CCDC96Q2M329 555 aa7.18□□□□□ -1.26
ERCC4-202ENST00000389138 PLA2G2CQ5R387 149 aa7.18□□□□□ -1.26
ERCC4-202ENST00000389138 PTCRAQ6ISU1 281 aaPredicted RBP7.18□□□□□ -1.26
ERCC4-202ENST00000389138 SAMD3Q8N6K7 520 aa7.18□□□□□ -1.26
ERCC4-202ENST00000389138 HOMER2Q9NSB8 354 aa7.18□□□□□ -1.26
ERCC4-202ENST00000389138 MAP10Q9P2G4 905 aa7.18□□□□□ -1.26
ERCC4-202ENST00000389138 TET3O43151 1660 aa7.18□□□□□ -1.26
ERCC4-202ENST00000389138 MROH1Q8NDA8 1641 aa7.17□□□□□ -1.26
ERCC4-202ENST00000389138 FYCO1Q9BQS8 1478 aa7.17□□□□□ -1.26
ERCC4-202ENST00000389138 KIF3BO15066 747 aa7.17□□□□□ -1.26
ERCC4-202ENST00000389138 BPNT1O95861 308 aa7.17□□□□□ -1.26
ERCC4-202ENST00000389138 IGHA2P01877 340 aa7.17□□□□□ -1.26
ERCC4-202ENST00000389138 CTSHP09668 335 aa7.17□□□□□ -1.26
ERCC4-202ENST00000389138 MASP1P48740 699 aa7.17□□□□□ -1.26
ERCC4-202ENST00000389138 SIM2Q14190 667 aaPredicted RBP7.17□□□□□ -1.26
ERCC4-202ENST00000389138 NBPF14Q5TI25 921 aa7.17□□□□□ -1.26
ERCC4-202ENST00000389138 OGFOD1Q8N543 542 aa7.17□□□□□ -1.26
ERCC4-202ENST00000389138 PDILTQ8N807 584 aa7.17□□□□□ -1.26
ERCC4-202ENST00000389138 MKNK1Q9BUB5 465 aa7.17□□□□□ -1.26
ERCC4-202ENST00000389138 CNTN3Q9P232 1028 aa7.17□□□□□ -1.26
ERCC4-202ENST00000389138 INTUQ9ULD6 942 aa7.17□□□□□ -1.26
ERCC4-202ENST00000389138 PDZRN3Q9UPQ7 1066 aa7.17□□□□□ -1.26
ERCC4-202ENST00000389138 MSH6P52701 1360 aa7.17□□□□□ -1.26
ERCC4-202ENST00000389138 CDC45O75419 566 aa7.16□□□□□ -1.26
ERCC4-202ENST00000389138 FBXO45P0C2W1 286 aa7.16□□□□□ -1.26
ERCC4-202ENST00000389138 LTKP29376 864 aa7.16□□□□□ -1.26
ERCC4-202ENST00000389138 GJA8P48165 433 aa7.16□□□□□ -1.26
ERCC4-202ENST00000389138 EXOSC10Q01780 885 aaKnown RBP7.16□□□□□ -1.26
ERCC4-202ENST00000389138 PSMD2Q13200 908 aa7.16□□□□□ -1.26
ERCC4-202ENST00000389138 MAPRE1Q15691 268 aaKnown RBP7.16□□□□□ -1.26
ERCC4-202ENST00000389138 BRDTQ58F21 947 aaPredicted RBP7.16□□□□□ -1.26
ERCC4-202ENST00000389138 LIAT1Q6ZQX7 453 aa7.16□□□□□ -1.26
ERCC4-202ENST00000389138 PODNQ7Z5L7 613 aa7.16□□□□□ -1.26
ERCC4-202ENST00000389138 KIAA0907Q7Z7F0 614 aaPredicted RBP7.16□□□□□ -1.26
ERCC4-202ENST00000389138 RNF135Q8IUD6 432 aa7.16□□□□□ -1.26
ERCC4-202ENST00000389138 SH3TC2Q8TF17 1288 aa7.16□□□□□ -1.26
ERCC4-202ENST00000389138 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.16□□□□□ -1.26
ERCC4-202ENST00000389138 RAB3GAP2Q9H2M9 1393 aa7.16□□□□□ -1.26
ERCC4-202ENST00000389138 ATP5J2-PTCD1G3V325 749 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms