RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 CDCA8Q53HL2 280 aa1.42□□□□□ -2.18
SNORD28-201ENST00000384706 COX20Q5RI15 118 aa1.42□□□□□ -2.18
SNORD28-201ENST00000384706 COL13A1Q5TAT6 717 aaPredicted RBP1.42□□□□□ -2.18
SNORD28-201ENST00000384706 FDX2Q6P4F2 183 aa1.42□□□□□ -2.18
SNORD28-201ENST00000384706 ADAMTSL4Q6UY14 1074 aa1.42□□□□□ -2.18
SNORD28-201ENST00000384706 NCAPG2Q86XI2 1143 aa1.42□□□□□ -2.18
SNORD28-201ENST00000384706 C12orf50Q8NA57 414 aaPredicted RBP1.42□□□□□ -2.18
SNORD28-201ENST00000384706 KLHL23Q8NBE8 558 aa1.42□□□□□ -2.18
SNORD28-201ENST00000384706 OR13H1Q8NG92 308 aa1.42□□□□□ -2.18
SNORD28-201ENST00000384706 GIMAP7Q8NHV1 300 aa1.42□□□□□ -2.18
SNORD28-201ENST00000384706 UBASH3BQ8TF42 649 aa1.42□□□□□ -2.18
SNORD28-201ENST00000384706 SLC7A3Q8WY07 619 aa1.42□□□□□ -2.18
SNORD28-201ENST00000384706 PIK3R5Q8WYR1 880 aa1.42□□□□□ -2.18
SNORD28-201ENST00000384706 GLMNQ92990 594 aa1.42□□□□□ -2.18
SNORD28-201ENST00000384706 COL26A1Q96A83 441 aa1.42□□□□□ -2.18
SNORD28-201ENST00000384706 ASIC4Q96FT7 647 aa1.42□□□□□ -2.18
SNORD28-201ENST00000384706 MYO19Q96H55 970 aa1.42□□□□□ -2.18
SNORD28-201ENST00000384706 CALR3Q96L12 384 aaKnown RBP1.42□□□□□ -2.18
SNORD28-201ENST00000384706 PRIMPOLQ96LW4 560 aa1.42□□□□□ -2.18
SNORD28-201ENST00000384706 POP1Q99575 1024 aaKnown RBP1.42□□□□□ -2.18
SNORD28-201ENST00000384706 OSBPL1AQ9BXW6 950 aa1.42□□□□□ -2.18
SNORD28-201ENST00000384706 PPP1R12CQ9BZL4 782 aa1.42□□□□□ -2.18
SNORD28-201ENST00000384706 RASSF4Q9H2L5 321 aa1.42□□□□□ -2.18
SNORD28-201ENST00000384706 VRTNQ9H8Y1 702 aa1.42□□□□□ -2.18
SNORD28-201ENST00000384706 SEC31BQ9NQW1 1179 aa1.42□□□□□ -2.18
SNORD28-201ENST00000384706 ATG3Q9NT62 314 aa1.42□□□□□ -2.18
SNORD28-201ENST00000384706 PIM2Q9P1W9 311 aa1.42□□□□□ -2.18
SNORD28-201ENST00000384706 LEMD3Q9Y2U8 911 aa1.42□□□□□ -2.18
SNORD28-201ENST00000384706 FAM196BA6NMK8 535 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 USP17L15C9J2P7 530 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 USP17L10C9JJH3 530 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 USP17L13C9JLJ4 530 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 USP17L12C9JPN9 530 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 USP17L11C9JVI0 530 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 USP17L21D6R901 530 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 USP17L18D6R9N7 530 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 USP17L22D6RA61 530 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 USP17L17D6RBQ6 530 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 USP17L19D6RCP7 530 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 USP17L20D6RJB6 530 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 PRMT3O60678 531 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 TRPA1O75762 1119 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 F13BP05160 661 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 CYP2E1P05181 493 aaPredicted RBP1.41□□□□□ -2.18
SNORD28-201ENST00000384706 HOXD8P13378 290 aaPredicted RBP1.41□□□□□ -2.18
SNORD28-201ENST00000384706 DRD2P14416 443 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 PTPRAP18433 802 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 EPHA1P21709 976 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 RFX1P22670 979 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 USP11P51784 963 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 CABP4P57796 275 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 USP17L24Q0WX57 530 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 FLIIQ13045 1269 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 FKBP5Q13451 457 aaPredicted RBP1.41□□□□□ -2.18
SNORD28-201ENST00000384706 NAA30Q147X3 362 aaPredicted RBP1.41□□□□□ -2.18
SNORD28-201ENST00000384706 TRIP4Q15650 581 aaPredicted RBP1.41□□□□□ -2.18
SNORD28-201ENST00000384706 ZNF124Q15973 351 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 SGO2Q562F6 1265 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 NUTM2GQ5VZR2 741 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 ANKRD34AQ69YU3 496 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 C16orf46Q6P387 395 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 SPOCD1Q6ZMY3 1216 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 PPP1R3FQ6ZSY5 799 aaPredicted RBP1.41□□□□□ -2.18
SNORD28-201ENST00000384706 ETFBKMTQ8IXQ9 262 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 SHISA5Q8N114 240 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 CEP120Q8N960 986 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 FAM200AQ8TCP9 573 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 GPR152Q8TDT2 470 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 FOXD4L4Q8WXT5 416 aaPredicted RBP1.41□□□□□ -2.18
SNORD28-201ENST00000384706 CLUAP1Q96AJ1 413 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 RUSC1Q9BVN2 902 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 PBX4Q9BYU1 374 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 SAP130Q9H0E3 1048 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 RNF208Q9H0X6 261 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 CCDC39Q9UFE4 941 aa1.41□□□□□ -2.18
SNORD28-201ENST00000384706 FNDC3AQ9Y2H6 1198 aaKnown RBP1.41□□□□□ -2.18
SNORD28-201ENST00000384706 FAM95CA0A1B0GW59 222 aa1.4□□□□□ -2.19
SNORD28-201ENST00000384706 MEGF11A6BM72 1044 aa1.4□□□□□ -2.19
SNORD28-201ENST00000384706 H3BRJ5 948 aa1.4□□□□□ -2.19
SNORD28-201ENST00000384706 TM4SF5O14894 197 aa1.4□□□□□ -2.19
SNORD28-201ENST00000384706 ZBTB39O15060 712 aa1.4□□□□□ -2.19
SNORD28-201ENST00000384706 CYP26A1O43174 497 aa1.4□□□□□ -2.19
SNORD28-201ENST00000384706 FOSL1P15407 271 aa1.4□□□□□ -2.19
SNORD28-201ENST00000384706 JUNBP17275 347 aaPredicted RBP1.4□□□□□ -2.19
SNORD28-201ENST00000384706 ZAP70P43403 619 aa1.4□□□□□ -2.19
SNORD28-201ENST00000384706 ARL4DP49703 201 aa1.4□□□□□ -2.19
SNORD28-201ENST00000384706 PIP4K2BP78356 416 aa1.4□□□□□ -2.19
SNORD28-201ENST00000384706 C19orf57Q0VDD7 668 aa1.4□□□□□ -2.19
SNORD28-201ENST00000384706 FAM26DQ5JW98 314 aa1.4□□□□□ -2.19
SNORD28-201ENST00000384706 ZNF648Q5T619 568 aaPredicted RBP1.4□□□□□ -2.19
SNORD28-201ENST00000384706 HGSNATQ68CP4 663 aa1.4□□□□□ -2.19
SNORD28-201ENST00000384706 PAOXQ6QHF9 649 aa1.4□□□□□ -2.19
SNORD28-201ENST00000384706 CAPN12Q6ZSI9 719 aa1.4□□□□□ -2.19
SNORD28-201ENST00000384706 POU5F2Q8N7G0 328 aa1.4□□□□□ -2.19
SNORD28-201ENST00000384706 FBLIM1Q8WUP2 373 aa1.4□□□□□ -2.19
SNORD28-201ENST00000384706 FBXL18Q96ME1 805 aa1.4□□□□□ -2.19
SNORD28-201ENST00000384706 TBC1D32Q96NH3 1257 aa1.4□□□□□ -2.19
SNORD28-201ENST00000384706 ARXQ96QS3 562 aa1.4□□□□□ -2.19
SNORD28-201ENST00000384706 MKNK1Q9BUB5 465 aa1.4□□□□□ -2.19
SNORD28-201ENST00000384706 USP26Q9BXU7 913 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms