RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 CRBNQ96SW2 442 aa20.12■□□□□ 0.81
SNRPB-201ENST00000381342 PSME4Q14997 1843 aa20.11■□□□□ 0.81
SNRPB-201ENST00000381342 MED23Q9ULK4 1368 aa20.11■□□□□ 0.81
SNRPB-201ENST00000381342 ARAP2Q8WZ64 1704 aa20.11■□□□□ 0.81
SNRPB-201ENST00000381342 ZNF804BA4D1E1 1349 aa20.11■□□□□ 0.81
SNRPB-201ENST00000381342 MROH5Q6ZUA9 1318 aa20.11■□□□□ 0.81
SNRPB-201ENST00000381342 EYA2O00167 538 aa20.11■□□□□ 0.81
SNRPB-201ENST00000381342 RAD17O75943 681 aa20.11■□□□□ 0.81
SNRPB-201ENST00000381342 POTEIP0CG38 1075 aa20.11■□□□□ 0.81
SNRPB-201ENST00000381342 POTEJP0CG39 1038 aa20.11■□□□□ 0.81
SNRPB-201ENST00000381342 KCNJ4P48050 445 aa20.11■□□□□ 0.81
SNRPB-201ENST00000381342 METTL24Q5JXM2 366 aa20.11■□□□□ 0.81
SNRPB-201ENST00000381342 SCN9AQ15858 1988 aa20.11■□□□□ 0.81
SNRPB-201ENST00000381342 KLRK1P26718 216 aa20.1■□□□□ 0.81
SNRPB-201ENST00000381342 ATP8B2P98198 1209 aa20.1■□□□□ 0.81
SNRPB-201ENST00000381342 POLA2Q14181 598 aa20.1■□□□□ 0.81
SNRPB-201ENST00000381342 USP50Q70EL3 339 aaPredicted RBP20.1■□□□□ 0.81
SNRPB-201ENST00000381342 ATG9AQ7Z3C6 839 aa20.1■□□□□ 0.81
SNRPB-201ENST00000381342 CHMP4BQ9H444 224 aaKnown RBP20.1■□□□□ 0.81
SNRPB-201ENST00000381342 COPRSQ9NQ92 184 aa20.1■□□□□ 0.81
SNRPB-201ENST00000381342 LEMD3Q9Y2U8 911 aa20.1■□□□□ 0.81
SNRPB-201ENST00000381342 ZNF646O15015 1829 aaPredicted RBP20.1■□□□□ 0.81
SNRPB-201ENST00000381342 CIAO1O76071 339 aa20.09■□□□□ 0.81
SNRPB-201ENST00000381342 EPS15P42566 896 aa20.09■□□□□ 0.81
SNRPB-201ENST00000381342 HTRA3P83110 453 aa20.09■□□□□ 0.81
SNRPB-201ENST00000381342 VGLL2Q8N8G2 317 aa20.09■□□□□ 0.81
SNRPB-201ENST00000381342 SSH3Q8TE77 659 aa20.09■□□□□ 0.81
SNRPB-201ENST00000381342 DBNDD1Q9H9R9 158 aa20.09■□□□□ 0.81
SNRPB-201ENST00000381342 ADARB2Q9NS39 739 aaKnown RBP20.09■□□□□ 0.81
SNRPB-201ENST00000381342 SCNN1DP51172 638 aa20.08■□□□□ 0.81
SNRPB-201ENST00000381342 DOK7Q18PE1 504 aa20.08■□□□□ 0.81
SNRPB-201ENST00000381342 TXNRD3Q86VQ6 643 aa20.08■□□□□ 0.81
SNRPB-201ENST00000381342 KLRG1Q96E93 195 aa20.08■□□□□ 0.81
SNRPB-201ENST00000381342 GPRC5DQ9NZD1 345 aa20.08■□□□□ 0.81
SNRPB-201ENST00000381342 IRS2Q9Y4H2 1338 aa20.07■□□□□ 0.8
SNRPB-201ENST00000381342 H7C1D1 291 aa20.07■□□□□ 0.8
SNRPB-201ENST00000381342 ECE2O60344 883 aa20.07■□□□□ 0.8
SNRPB-201ENST00000381342 GMPSP49915 693 aaPredicted RBP20.07■□□□□ 0.8
SNRPB-201ENST00000381342 CNTROBQ8N137 903 aa20.07■□□□□ 0.8
SNRPB-201ENST00000381342 DNAJC5GQ8N7S2 189 aa20.07■□□□□ 0.8
SNRPB-201ENST00000381342 FBXO3Q9UK99 471 aa20.07■□□□□ 0.8
SNRPB-201ENST00000381342 YDJCA8MPS7 323 aa20.06■□□□□ 0.8
SNRPB-201ENST00000381342 IL15P40933 162 aaPredicted RBP20.06■□□□□ 0.8
SNRPB-201ENST00000381342 MYH13Q9UKX3 1938 aa20.06■□□□□ 0.8
SNRPB-201ENST00000381342 PDE8BO95263 885 aa20.05■□□□□ 0.8
SNRPB-201ENST00000381342 MAP1SQ66K74 1059 aaPredicted RBP20.05■□□□□ 0.8
SNRPB-201ENST00000381342 SIRT2Q8IXJ6 389 aa20.05■□□□□ 0.8
SNRPB-201ENST00000381342 CREBZFQ9NS37 354 aa20.05■□□□□ 0.8
SNRPB-201ENST00000381342 UBE4AQ14139 1066 aa20.04■□□□□ 0.8
SNRPB-201ENST00000381342 CNOT7Q9UIV1 285 aaKnown RBP20.04■□□□□ 0.8
SNRPB-201ENST00000381342 PSMD14O00487 310 aa20.03■□□□□ 0.8
SNRPB-201ENST00000381342 RPS12P25398 132 aaKnown RBP20.03■□□□□ 0.8
SNRPB-201ENST00000381342 IRX6P78412 446 aaPredicted RBP20.03■□□□□ 0.8
SNRPB-201ENST00000381342 PUM3Q15397 648 aaKnown RBP20.03■□□□□ 0.8
SNRPB-201ENST00000381342 RPAP2Q8IXW5 612 aaPredicted RBP20.03■□□□□ 0.8
SNRPB-201ENST00000381342 DPF2Q92785 391 aa20.03■□□□□ 0.8
SNRPB-201ENST00000381342 CEP126Q9P2H0 1117 aa20.03■□□□□ 0.8
SNRPB-201ENST00000381342 ZNF609O15014 1411 aa20.02■□□□□ 0.8
SNRPB-201ENST00000381342 TMEM88BA6NKF7 163 aa20.02■□□□□ 0.8
SNRPB-201ENST00000381342 SURF6O75683 361 aaKnown RBP20.02■□□□□ 0.8
SNRPB-201ENST00000381342 ITGBL1O95965 494 aaPredicted RBP20.02■□□□□ 0.8
SNRPB-201ENST00000381342 FGFR2P21802 821 aa20.02■□□□□ 0.8
SNRPB-201ENST00000381342 TFCP2Q12800 502 aa20.02■□□□□ 0.8
SNRPB-201ENST00000381342 G3BP1Q13283 466 aaKnown RBP eCLIP20.02■□□□□ 0.82e-9■■□□□ 14.2
SNRPB-201ENST00000381342 OS9Q13438 667 aaPredicted RBP20.02■□□□□ 0.8
SNRPB-201ENST00000381342 C15orf52Q6ZUT6 534 aaKnown RBP20.02■□□□□ 0.8
SNRPB-201ENST00000381342 KCNQ5Q9NR82 932 aa20.02■□□□□ 0.8
SNRPB-201ENST00000381342 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.02■□□□□ 0.8
SNRPB-201ENST00000381342 HMMRO75330 724 aa20.01■□□□□ 0.79
SNRPB-201ENST00000381342 ATP2B3Q16720 1220 aa20.01■□□□□ 0.79
SNRPB-201ENST00000381342 PODNQ7Z5L7 613 aa20.01■□□□□ 0.79
SNRPB-201ENST00000381342 EXOC6Q8TAG9 804 aa20.01■□□□□ 0.79
SNRPB-201ENST00000381342 EXOC6BQ9Y2D4 811 aa20.01■□□□□ 0.79
SNRPB-201ENST00000381342 ZBTB12Q9Y330 459 aaPredicted RBP20.01■□□□□ 0.79
SNRPB-201ENST00000381342 PASKQ96RG2 1323 aa20.01■□□□□ 0.79
SNRPB-201ENST00000381342 SASH1O94885 1247 aa20■□□□□ 0.79
SNRPB-201ENST00000381342 GYG1P46976 350 aa20■□□□□ 0.79
SNRPB-201ENST00000381342 ZNF804AQ7Z570 1209 aa20■□□□□ 0.79
SNRPB-201ENST00000381342 MICALL2Q8IY33 904 aa20■□□□□ 0.79
SNRPB-201ENST00000381342 ZC3H15Q8WU90 426 aaKnown RBP20■□□□□ 0.79
SNRPB-201ENST00000381342 COA1Q9GZY4 146 aa20■□□□□ 0.79
SNRPB-201ENST00000381342 NOP58Q9Y2X3 529 aaKnown RBP20■□□□□ 0.79
SNRPB-201ENST00000381342 IFIT1P09914 478 aaKnown RBP19.99■□□□□ 0.79
SNRPB-201ENST00000381342 SLC5A1P13866 664 aa19.99■□□□□ 0.79
SNRPB-201ENST00000381342 PCDHB15Q9Y5E8 787 aa19.99■□□□□ 0.79
SNRPB-201ENST00000381342 VIL1P09327 827 aaKnown RBP19.98■□□□□ 0.79
SNRPB-201ENST00000381342 LPIN2Q92539 896 aa19.98■□□□□ 0.79
SNRPB-201ENST00000381342 CD209Q9NNX6 404 aa19.98■□□□□ 0.79
SNRPB-201ENST00000381342 RBM26Q5T8P6 1007 aaKnown RBP19.97■□□□□ 0.79
SNRPB-201ENST00000381342 JMYQ8N9B5 988 aa19.97■□□□□ 0.79
SNRPB-201ENST00000381342 FBXW7Q969H0 707 aa19.97■□□□□ 0.79
SNRPB-201ENST00000381342 FAM84BQ96KN1 310 aaPredicted RBP19.97■□□□□ 0.79
SNRPB-201ENST00000381342 MKRN1Q9UHC7 482 aaKnown RBP19.97■□□□□ 0.79
SNRPB-201ENST00000381342 USP17L3A6NCW0 530 aa19.96■□□□□ 0.79
SNRPB-201ENST00000381342 USP17L4A6NCW7 530 aa19.96■□□□□ 0.79
SNRPB-201ENST00000381342 APBB1O00213 710 aa19.96■□□□□ 0.79
SNRPB-201ENST00000381342 ADORA1P30542 326 aa19.96■□□□□ 0.79
SNRPB-201ENST00000381342 HIBADHP31937 336 aaKnown RBP19.96■□□□□ 0.79
SNRPB-201ENST00000381342 RSBN1LQ6PCB5 846 aaPredicted RBP19.96■□□□□ 0.79
SNRPB-201ENST00000381342 USP17L1Q7RTZ2 530 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms