RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.96□□□□□ -0.015e-6■■■■□ 24.2
VPS16-202ENST00000380445 A0A0G2JS52 829 aa14.96□□□□□ -0.02
VPS16-202ENST00000380445 VPS37CA5D8V6 355 aaPredicted RBP14.96□□□□□ -0.02
VPS16-202ENST00000380445 ZSCAN25Q6NSZ9 544 aa14.96□□□□□ -0.02
VPS16-202ENST00000380445 Q6ZUG5 572 aa14.96□□□□□ -0.02
VPS16-202ENST00000380445 SMARCC1Q92922 1105 aaPredicted RBP14.96□□□□□ -0.02
VPS16-202ENST00000380445 TRIM44Q96DX7 344 aaPredicted RBP14.96□□□□□ -0.02
VPS16-202ENST00000380445 RIC1Q4ADV7 1423 aa14.95□□□□□ -0.02
VPS16-202ENST00000380445 LOC102724428A0A0B4J2F2 783 aa14.95□□□□□ -0.02
VPS16-202ENST00000380445 SIK1P57059 783 aa14.95□□□□□ -0.02
VPS16-202ENST00000380445 UBE2HP62256 183 aa14.95□□□□□ -0.02
VPS16-202ENST00000380445 TTF1Q15361 905 aaPredicted RBP14.95□□□□□ -0.02
VPS16-202ENST00000380445 PARP10Q53GL7 1025 aa14.95□□□□□ -0.02
VPS16-202ENST00000380445 NSFL1CQ9UNZ2 370 aaKnown RBP14.95□□□□□ -0.02
VPS16-202ENST00000380445 PDE8BO95263 885 aa14.95□□□□□ -0.02
VPS16-202ENST00000380445 CRKLP46109 303 aaKnown RBP14.95□□□□□ -0.02
VPS16-202ENST00000380445 CCDC173Q0VFZ6 552 aa14.95□□□□□ -0.02
VPS16-202ENST00000380445 INTS5Q6P9B9 1019 aaKnown RBP14.95□□□□□ -0.02
VPS16-202ENST00000380445 MARCH10Q8NA82 808 aaPredicted RBP14.95□□□□□ -0.02
VPS16-202ENST00000380445 GTF3C6Q969F1 213 aa14.95□□□□□ -0.02
VPS16-202ENST00000380445 GDPD2Q9HCC8 539 aa14.95□□□□□ -0.02
VPS16-202ENST00000380445 CNPY2Q9Y2B0 182 aa14.95□□□□□ -0.02
VPS16-202ENST00000380445 NWD2Q9ULI1 1742 aa14.95□□□□□ -0.02
VPS16-202ENST00000380445 UBN2Q6ZU65 1347 aa14.94□□□□□ -0.02
VPS16-202ENST00000380445 MROH5Q6ZUA9 1318 aa14.94□□□□□ -0.02
VPS16-202ENST00000380445 WASHC4Q2M389 1173 aa14.94□□□□□ -0.02
VPS16-202ENST00000380445 APPBP2Q92624 585 aa14.94□□□□□ -0.02
VPS16-202ENST00000380445 SYCE3A1L190 88 aa14.94□□□□□ -0.02
VPS16-202ENST00000380445 NUTM2BA6NNL0 878 aaPredicted RBP14.94□□□□□ -0.02
VPS16-202ENST00000380445 NUTM2EB1AL46 878 aaPredicted RBP14.94□□□□□ -0.02
VPS16-202ENST00000380445 LETM1O95202 739 aaPredicted RBP14.94□□□□□ -0.02
VPS16-202ENST00000380445 ZAP70P43403 619 aa14.94□□□□□ -0.02
VPS16-202ENST00000380445 NUTM2AQ8IVF1 878 aaPredicted RBP14.94□□□□□ -0.02
VPS16-202ENST00000380445 KLHL34Q8N239 644 aa14.94□□□□□ -0.02
VPS16-202ENST00000380445 ACSBG1Q96GR2 724 aa14.94□□□□□ -0.02
VPS16-202ENST00000380445 COL9A3Q14050 684 aaPredicted RBP14.93□□□□□ -0.02
VPS16-202ENST00000380445 VGLL2Q8N8G2 317 aa14.93□□□□□ -0.02
VPS16-202ENST00000380445 OSBP2Q969R2 916 aa14.93□□□□□ -0.02
VPS16-202ENST00000380445 UTP14AQ9BVJ6 771 aaKnown RBP14.93□□□□□ -0.02
VPS16-202ENST00000380445 M0R2C6 588 aa14.93□□□□□ -0.02
VPS16-202ENST00000380445 UQCRFS1P1P0C7P4 283 aa14.93□□□□□ -0.02
VPS16-202ENST00000380445 STK3Q13188 491 aa14.93□□□□□ -0.02
VPS16-202ENST00000380445 LLPHQ9BRT6 129 aaKnown RBP14.93□□□□□ -0.02
VPS16-202ENST00000380445 SLIT2O94813 1529 aa14.92□□□□□ -0.02
VPS16-202ENST00000380445 E7EWF7 191 aa14.92□□□□□ -0.02
VPS16-202ENST00000380445 GADD45BO75293 160 aaPredicted RBP14.92□□□□□ -0.02
VPS16-202ENST00000380445 CICQ96RK0 1608 aaPredicted RBP14.92□□□□□ -0.02
VPS16-202ENST00000380445 KRT85P78386 507 aa14.92□□□□□ -0.02
VPS16-202ENST00000380445 PUM3Q15397 648 aaKnown RBP14.92□□□□□ -0.02
VPS16-202ENST00000380445 IMMTQ16891 758 aaKnown RBP14.92□□□□□ -0.02
VPS16-202ENST00000380445 SLFNL1Q499Z3 407 aa14.92□□□□□ -0.02
VPS16-202ENST00000380445 STOX1Q6ZVD7 989 aa14.92□□□□□ -0.02
VPS16-202ENST00000380445 LPIN2Q92539 896 aa14.92□□□□□ -0.02
VPS16-202ENST00000380445 BRF1Q92994 677 aa14.92□□□□□ -0.02
VPS16-202ENST00000380445 AGXT2Q9BYV1 514 aa14.92□□□□□ -0.02
VPS16-202ENST00000380445 KIF3AQ9Y496 699 aa14.92□□□□□ -0.02
VPS16-202ENST00000380445 FIBPO43427 364 aa14.91□□□□□ -0.02
VPS16-202ENST00000380445 EXOSC10Q01780 885 aaKnown RBP14.91□□□□□ -0.02
VPS16-202ENST00000380445 DNM1Q05193 864 aaKnown RBP14.91□□□□□ -0.02
VPS16-202ENST00000380445 SCARF1Q14162 830 aa14.91□□□□□ -0.02
VPS16-202ENST00000380445 PPP1R9BQ96SB3 815 aa14.91□□□□□ -0.02
VPS16-202ENST00000380445 PFKFB2O60825 505 aa14.91□□□□□ -0.02
VPS16-202ENST00000380445 MCAMP43121 646 aa14.91□□□□□ -0.02
VPS16-202ENST00000380445 SUSD4Q5VX71 490 aa14.91□□□□□ -0.02
VPS16-202ENST00000380445 FBXO41Q8TF61 875 aa14.91□□□□□ -0.02
VPS16-202ENST00000380445 ZNF652Q9Y2D9 606 aa14.91□□□□□ -0.02
VPS16-202ENST00000380445 CCDC183Q5T5S1 534 aa14.9□□□□□ -0.02
VPS16-202ENST00000380445 FBXL16Q8N461 479 aa14.9□□□□□ -0.02
VPS16-202ENST00000380445 MPHOSPH8Q99549 860 aa14.9□□□□□ -0.02
VPS16-202ENST00000380445 RBSNQ9H1K0 784 aa14.9□□□□□ -0.02
VPS16-202ENST00000380445 RREB1Q92766 1687 aa14.9□□□□□ -0.02
VPS16-202ENST00000380445 CAMTA2O94983 1202 aa14.9□□□□□ -0.02
VPS16-202ENST00000380445 CCDC152Q4G0S7 254 aa14.9□□□□□ -0.02
VPS16-202ENST00000380445 TSPY26PQ9H489 355 aa14.9□□□□□ -0.02
VPS16-202ENST00000380445 ARID4AP29374 1257 aaPredicted RBP14.9□□□□□ -0.02
VPS16-202ENST00000380445 HMGN5P82970 282 aaKnown RBP14.9□□□□□ -0.02
VPS16-202ENST00000380445 CDC37L1Q7L3B6 337 aa14.9□□□□□ -0.02
VPS16-202ENST00000380445 FAM184AQ8NB25 1140 aa14.9□□□□□ -0.02
VPS16-202ENST00000380445 SLC5A1P13866 664 aa14.89□□□□□ -0.03
VPS16-202ENST00000380445 ITPK1Q13572 414 aa14.89□□□□□ -0.03
VPS16-202ENST00000380445 ZNF274Q96GC6 653 aaPredicted RBP14.89□□□□□ -0.03
VPS16-202ENST00000380445 SCAND2PQ9GZW5 306 aaPredicted RBP14.89□□□□□ -0.03
VPS16-202ENST00000380445 UBE3CQ15386 1083 aa14.89□□□□□ -0.03
VPS16-202ENST00000380445 CCDC102BQ68D86 513 aa14.89□□□□□ -0.03
VPS16-202ENST00000380445 ELP1O95163 1332 aa14.89□□□□□ -0.03
VPS16-202ENST00000380445 LRP5O75197 1615 aa14.89□□□□□ -0.03
VPS16-202ENST00000380445 LAMA4Q16363 1823 aa14.88□□□□□ -0.03
VPS16-202ENST00000380445 HCLS1P14317 486 aaPredicted RBP14.88□□□□□ -0.03
VPS16-202ENST00000380445 HSPA1LP34931 641 aa14.88□□□□□ -0.03
VPS16-202ENST00000380445 ADD2P35612 726 aa14.88□□□□□ -0.03
VPS16-202ENST00000380445 CLEC4GQ6UXB4 293 aa14.88□□□□□ -0.03
VPS16-202ENST00000380445 SMARCC2Q8TAQ2 1214 aa14.88□□□□□ -0.03
VPS16-202ENST00000380445 PUS7LQ9H0K6 701 aaKnown RBP14.88□□□□□ -0.03
VPS16-202ENST00000380445 NIP7Q9Y221 180 aaKnown RBP eCLIP14.88□□□□□ -0.03
VPS16-202ENST00000380445 RTL9Q8NET4 1388 aa14.88□□□□□ -0.03
VPS16-202ENST00000380445 MYH7P12883 1935 aa14.88□□□□□ -0.03
VPS16-202ENST00000380445 H3BQV1 296 aa14.88□□□□□ -0.03
VPS16-202ENST00000380445 GPAA1O43292 621 aa14.88□□□□□ -0.03
VPS16-202ENST00000380445 FGAP02671 866 aa14.88□□□□□ -0.03
VPS16-202ENST00000380445 FGFR2P21802 821 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms